RNA–Protein interactions for RNA: ENST00000533078.5

CMTM1-216, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-216ENST00000533078 GAGE12BA1L429 117 aa8□□□□□ -1.13
CMTM1-216ENST00000533078 H3BRN7 92 aa8□□□□□ -1.13
CMTM1-216ENST00000533078 WRBO00258 174 aa8□□□□□ -1.13
CMTM1-216ENST00000533078 CTDSPLO15194 276 aa8□□□□□ -1.13
CMTM1-216ENST00000533078 GAGE7O76087 117 aa8□□□□□ -1.13
CMTM1-216ENST00000533078 OR5G3P0C626 314 aa8□□□□□ -1.13
CMTM1-216ENST00000533078 GAGE12FP0CL80 117 aa8□□□□□ -1.13
CMTM1-216ENST00000533078 GAGE12GP0CL81 117 aa8□□□□□ -1.13
CMTM1-216ENST00000533078 GAGE12IP0CL82 117 aa8□□□□□ -1.13
CMTM1-216ENST00000533078 SLC25A6P12236 298 aa8□□□□□ -1.13
CMTM1-216ENST00000533078 ANXA7P20073 488 aaKnown RBP8□□□□□ -1.13
CMTM1-216ENST00000533078 LINC00315P59091 139 aa8□□□□□ -1.13
CMTM1-216ENST00000533078 SELENOTP62341 195 aa8□□□□□ -1.13
CMTM1-216ENST00000533078 ESRGQ1W209 222 aa8□□□□□ -1.13
CMTM1-216ENST00000533078 SPANXN5Q5MJ07 72 aa8□□□□□ -1.13
CMTM1-216ENST00000533078 RPUSD4Q96CM3 377 aaKnown RBP8□□□□□ -1.13
CMTM1-216ENST00000533078 SHANK2-AS3Q9BTD1 123 aa8□□□□□ -1.13
CMTM1-216ENST00000533078 MRPS26Q9BYN8 205 aaKnown RBP8□□□□□ -1.13
CMTM1-216ENST00000533078 STRAPQ9Y3F4 350 aaKnown RBP8□□□□□ -1.13
CMTM1-216ENST00000533078 A0A087X0K7 114 aa7.99□□□□□ -1.13
CMTM1-216ENST00000533078 ANKRD20A5PA0PJZ0 165 aa7.99□□□□□ -1.13
CMTM1-216ENST00000533078 SYNGR2O43760 224 aa7.99□□□□□ -1.13
CMTM1-216ENST00000533078 CXCL2P19875 107 aa7.99□□□□□ -1.13
CMTM1-216ENST00000533078 CXCL3P19876 107 aa7.99□□□□□ -1.13
CMTM1-216ENST00000533078 VAMP1P23763 118 aa7.99□□□□□ -1.13
CMTM1-216ENST00000533078 FAUP35544 74 aaKnown RBP7.99□□□□□ -1.13
CMTM1-216ENST00000533078 CYP2G1PQ6ZSU1 146 aa7.99□□□□□ -1.13
CMTM1-216ENST00000533078 ACOT7LQ6ZUV0 252 aa7.99□□□□□ -1.13
CMTM1-216ENST00000533078 TMED4Q7Z7H5 227 aa7.99□□□□□ -1.13
CMTM1-216ENST00000533078 CCDC190Q86UF4 302 aa7.99□□□□□ -1.13
CMTM1-216ENST00000533078 NFE4Q86UQ8 179 aa7.99□□□□□ -1.13
CMTM1-216ENST00000533078 DIRAS2Q96HU8 199 aa7.99□□□□□ -1.13
CMTM1-216ENST00000533078 C17orf77Q96MU5 243 aa7.99□□□□□ -1.13
CMTM1-216ENST00000533078 TRGV2A0A075B6R0 118 aa7.98□□□□□ -1.13
CMTM1-216ENST00000533078 SIVA1O15304 175 aa7.98□□□□□ -1.13
CMTM1-216ENST00000533078 PITX3O75364 302 aa7.98□□□□□ -1.13
CMTM1-216ENST00000533078 LINC00869P0C866 280 aa7.98□□□□□ -1.13
CMTM1-216ENST00000533078 Q5VSD8 79 aa7.98□□□□□ -1.13
CMTM1-216ENST00000533078 LCN15Q6UWW0 184 aa7.98□□□□□ -1.13
CMTM1-216ENST00000533078 LYPD1Q8N2G4 141 aa7.98□□□□□ -1.13
CMTM1-216ENST00000533078 SLC50A1Q9BRV3 221 aa7.98□□□□□ -1.13
CMTM1-216ENST00000533078 RSL24D1Q9UHA3 163 aaKnown RBP7.98□□□□□ -1.13
CMTM1-216ENST00000533078 TRAV9-2A0A087WT02 112 aa7.97□□□□□ -1.13
CMTM1-216ENST00000533078 H3BP45 60 aa7.97□□□□□ -1.13
CMTM1-216ENST00000533078 SMIM18P0DKX4 95 aa7.97□□□□□ -1.13
CMTM1-216ENST00000533078 HOXA5P20719 270 aa7.97□□□□□ -1.13
CMTM1-216ENST00000533078 TMEM128Q5BJH2 165 aa7.97□□□□□ -1.13
CMTM1-216ENST00000533078 TMEM182Q6ZP80 229 aaPredicted RBP7.97□□□□□ -1.13
CMTM1-216ENST00000533078 LINC00612Q8N6U2 182 aa7.97□□□□□ -1.13
CMTM1-216ENST00000533078 MIXL1Q9H2W2 232 aa7.97□□□□□ -1.13
CMTM1-216ENST00000533078 PRSS46E5RG02 174 aa7.96□□□□□ -1.14
CMTM1-216ENST00000533078 FAM229AH3BQW9 127 aa7.96□□□□□ -1.14
CMTM1-216ENST00000533078 LEPP41159 167 aa7.96□□□□□ -1.14
CMTM1-216ENST00000533078 CTF1Q16619 201 aa7.96□□□□□ -1.14
CMTM1-216ENST00000533078 LRTM2Q8N967 370 aa7.96□□□□□ -1.14
CMTM1-216ENST00000533078 ZNF680Q8NEM1 530 aa7.96□□□□□ -1.14
CMTM1-216ENST00000533078 PYGO2Q9BRQ0 406 aa7.96□□□□□ -1.14
CMTM1-216ENST00000533078 ARL6Q9H0F7 186 aa7.96□□□□□ -1.14
CMTM1-216ENST00000533078 TMPRSS5Q9H3S3 457 aa7.96□□□□□ -1.14
CMTM1-216ENST00000533078 PMS2P5A8MQ11 134 aa7.95□□□□□ -1.14
CMTM1-216ENST00000533078 CTDSP2O14595 271 aa7.95□□□□□ -1.14
CMTM1-216ENST00000533078 AP3S2P59780 193 aa7.95□□□□□ -1.14
CMTM1-216ENST00000533078 PLP1P60201 277 aa7.95□□□□□ -1.14
CMTM1-216ENST00000533078 DAZ2Q13117 558 aaKnown RBP7.95□□□□□ -1.14
CMTM1-216ENST00000533078 PXDC1Q5TGL8 231 aa7.95□□□□□ -1.14
CMTM1-216ENST00000533078 GFI1BQ5VTD9 330 aa7.95□□□□□ -1.14
CMTM1-216ENST00000533078 BPIFA4PQ86YQ2 179 aa7.95□□□□□ -1.14
CMTM1-216ENST00000533078 NAA50Q9GZZ1 169 aaKnown RBP7.95□□□□□ -1.14
CMTM1-216ENST00000533078 ARV1Q9H2C2 271 aa7.95□□□□□ -1.14
CMTM1-216ENST00000533078 NPVFQ9HCQ7 196 aa7.95□□□□□ -1.14
CMTM1-216ENST00000533078 MGAT4CQ9UBM8 478 aa7.95□□□□□ -1.14
CMTM1-216ENST00000533078 PXMP4Q9Y6I8 212 aa7.95□□□□□ -1.14
CMTM1-216ENST00000533078 ICOSQ9Y6W8 199 aa7.95□□□□□ -1.14
CMTM1-216ENST00000533078 A0A096LPF7 62 aa7.94□□□□□ -1.14
CMTM1-216ENST00000533078 TRAV12-3A0A0B4J271 114 aa7.94□□□□□ -1.14
CMTM1-216ENST00000533078 J3KRW8 73 aa7.94□□□□□ -1.14
CMTM1-216ENST00000533078 GOSR2O14653 212 aa7.94□□□□□ -1.14
CMTM1-216ENST00000533078 NXPH4O95158 308 aa7.94□□□□□ -1.14
CMTM1-216ENST00000533078 HOXB5P09067 269 aa7.94□□□□□ -1.14
CMTM1-216ENST00000533078 ICAM4Q14773 271 aa7.94□□□□□ -1.14
CMTM1-216ENST00000533078 TEPPQ6URK8 271 aa7.94□□□□□ -1.14
CMTM1-216ENST00000533078 ZNF331Q9NQX6 463 aaPredicted RBP7.94□□□□□ -1.14
CMTM1-216ENST00000533078 PSENENQ9NZ42 101 aa7.94□□□□□ -1.14
CMTM1-216ENST00000533078 SRRM2Q9UQ35 2752 aaKnown RBP7.93□□□□□ -1.14
CMTM1-216ENST00000533078 TRGV1A0A0A0MS02 117 aa7.93□□□□□ -1.14
CMTM1-216ENST00000533078 PAX4O43316 350 aa7.93□□□□□ -1.14
CMTM1-216ENST00000533078 COX7A2P2O60397 106 aa7.93□□□□□ -1.14
CMTM1-216ENST00000533078 RRAS2P62070 204 aaPredicted RBP7.93□□□□□ -1.14
CMTM1-216ENST00000533078 SLAQ13239 276 aa7.93□□□□□ -1.14
CMTM1-216ENST00000533078 Q6ZRN7 208 aaPredicted RBP7.93□□□□□ -1.14
CMTM1-216ENST00000533078 Q6ZTI0 123 aa7.93□□□□□ -1.14
CMTM1-216ENST00000533078 LINC00305Q7Z4B0 112 aa7.93□□□□□ -1.14
CMTM1-216ENST00000533078 ZNF546Q86UE3 836 aa7.93□□□□□ -1.14
CMTM1-216ENST00000533078 ZBTB8BQ8NAP8 495 aaPredicted RBP7.93□□□□□ -1.14
CMTM1-216ENST00000533078 C18orf15Q96N68 181 aa7.93□□□□□ -1.14
CMTM1-216ENST00000533078 ODF3Q96PU9 254 aa7.93□□□□□ -1.14
CMTM1-216ENST00000533078 SLC25A21Q9BQT8 299 aaPredicted RBP7.93□□□□□ -1.14
CMTM1-216ENST00000533078 FABP12A6NFH5 140 aa7.92□□□□□ -1.14
CMTM1-216ENST00000533078 FNDC10F2Z333 226 aa7.92□□□□□ -1.14
CMTM1-216ENST00000533078 J3QL48 77 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms