RNA–Protein interactions for RNA: ENST00000532649.5

CTNND1-232, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,026 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-232ENST00000532649 PLXND1Q9Y4D7 1925 aa7.12□□□□□ -1.27
CTNND1-232ENST00000532649 TRAV13-1A0A0B4J241 112 aa7.12□□□□□ -1.27
CTNND1-232ENST00000532649 WT1P19544 449 aaPredicted RBP7.12□□□□□ -1.27
CTNND1-232ENST00000532649 PCNX2A6NKB5 2137 aa7.12□□□□□ -1.27
CTNND1-232ENST00000532649 TRAV25A0A0B4J276 109 aa7.12□□□□□ -1.27
CTNND1-232ENST00000532649 MMP23AO75900 390 aa7.12□□□□□ -1.27
CTNND1-232ENST00000532649 MPZP25189 248 aa7.12□□□□□ -1.27
CTNND1-232ENST00000532649 UBE2BP63146 152 aa7.12□□□□□ -1.27
CTNND1-232ENST00000532649 VOPP1Q96AW1 172 aa7.12□□□□□ -1.27
CTNND1-232ENST00000532649 GSN-AS1Q9NRJ2 163 aa7.12□□□□□ -1.27
CTNND1-232ENST00000532649 ZNF581Q9P0T4 197 aa7.12□□□□□ -1.27
CTNND1-232ENST00000532649 LAMTOR2Q9Y2Q5 125 aa7.12□□□□□ -1.27
CTNND1-232ENST00000532649 TAL2Q16559 108 aa7.11□□□□□ -1.27
CTNND1-232ENST00000532649 FAM19A2Q8N3H0 131 aa7.11□□□□□ -1.27
CTNND1-232ENST00000532649 USMG5Q96IX5 58 aa7.11□□□□□ -1.27
CTNND1-232ENST00000532649 ZFHX2Q9C0A1 2572 aaPredicted RBP7.11□□□□□ -1.27
CTNND1-232ENST00000532649 SPTAN1Q13813 2472 aaKnown RBP7.11□□□□□ -1.27
CTNND1-232ENST00000532649 TCTEX1D4Q5JR98 221 aa7.11□□□□□ -1.27
CTNND1-232ENST00000532649 MBNL3Q9NUK0 354 aaKnown RBP7.11□□□□□ -1.27
CTNND1-232ENST00000532649 FAM215AQ9Y5M1 114 aa7.11□□□□□ -1.27
CTNND1-232ENST00000532649 USF3Q68DE3 2245 aa7.11□□□□□ -1.27
CTNND1-232ENST00000532649 MUC6Q6W4X9 2439 aa7.11□□□□□ -1.27
CTNND1-232ENST00000532649 IGKV2-40A0A087WW87 121 aaPredicted RBP7.11□□□□□ -1.27
CTNND1-232ENST00000532649 TRAV8-1A0A0A6YYK1 113 aa7.11□□□□□ -1.27
CTNND1-232ENST00000532649 IGKV2D-40P01614 121 aaPredicted RBP7.11□□□□□ -1.27
CTNND1-232ENST00000532649 C15orf32Q32M92 178 aa7.11□□□□□ -1.27
CTNND1-232ENST00000532649 LINC01559Q495D7 138 aa7.11□□□□□ -1.27
CTNND1-232ENST00000532649 RNF126Q9BV68 326 aa7.11□□□□□ -1.27
CTNND1-232ENST00000532649 CLPSL1A2RUU4 121 aa7.11□□□□□ -1.27
CTNND1-232ENST00000532649 VCYO14598 125 aa7.11□□□□□ -1.27
CTNND1-232ENST00000532649 FCN3O75636 299 aa7.11□□□□□ -1.27
CTNND1-232ENST00000532649 SUPT4H1P63272 117 aaKnown RBP7.11□□□□□ -1.27
CTNND1-232ENST00000532649 TMEM190Q8WZ59 177 aa7.11□□□□□ -1.27
CTNND1-232ENST00000532649 DKK4Q9UBT3 224 aa7.11□□□□□ -1.27
CTNND1-232ENST00000532649 DOCK7Q96N67 2140 aa7.11□□□□□ -1.27
CTNND1-232ENST00000532649 H0YJW9 148 aa7.11□□□□□ -1.27
CTNND1-232ENST00000532649 AMBPP02760 352 aa7.11□□□□□ -1.27
CTNND1-232ENST00000532649 ID3Q02535 119 aa7.11□□□□□ -1.27
CTNND1-232ENST00000532649 SAMD5Q5TGI4 173 aa7.11□□□□□ -1.27
CTNND1-232ENST00000532649 CHCHD1Q96BP2 118 aaKnown RBP7.11□□□□□ -1.27
CTNND1-232ENST00000532649 MSMBP08118 114 aa7.1□□□□□ -1.27
CTNND1-232ENST00000532649 SAA4P35542 130 aa7.1□□□□□ -1.27
CTNND1-232ENST00000532649 FAM90A2PQ658T7 463 aa7.1□□□□□ -1.27
CTNND1-232ENST00000532649 ZNF479Q96JC4 524 aa7.1□□□□□ -1.27
CTNND1-232ENST00000532649 Q96MF0 132 aa7.1□□□□□ -1.27
CTNND1-232ENST00000532649 C2orf16Q68DN1 1984 aa7.1□□□□□ -1.27
CTNND1-232ENST00000532649 KIAA2026Q5HYC2 2103 aa7.1□□□□□ -1.27
CTNND1-232ENST00000532649 TRAV8-3A0A0A6YYJ7 113 aa7.1□□□□□ -1.27
CTNND1-232ENST00000532649 LY6G6FQ5SQ64 297 aa7.1□□□□□ -1.27
CTNND1-232ENST00000532649 C9orf153Q5TBE3 101 aa7.1□□□□□ -1.27
CTNND1-232ENST00000532649 C1orf122Q6ZSJ8 110 aa7.1□□□□□ -1.27
CTNND1-232ENST00000532649 ZNF524Q96C55 264 aa7.1□□□□□ -1.27
CTNND1-232ENST00000532649 SRRM4A7MD48 611 aaKnown RBP7.1□□□□□ -1.27
CTNND1-232ENST00000532649 LINC01619G3V211 115 aa7.1□□□□□ -1.27
CTNND1-232ENST00000532649 C5orf64Q2M2E5 130 aa7.1□□□□□ -1.27
CTNND1-232ENST00000532649 LHFPL1Q86WI0 220 aa7.1□□□□□ -1.27
CTNND1-232ENST00000532649 PRIMA1Q86XR5 153 aa7.1□□□□□ -1.27
CTNND1-232ENST00000532649 LINC00477Q96M19 166 aa7.1□□□□□ -1.27
CTNND1-232ENST00000532649 RNASE7Q9H1E1 156 aaKnown RBP7.1□□□□□ -1.27
CTNND1-232ENST00000532649 K7EM74 188 aa7.1□□□□□ -1.27
CTNND1-232ENST00000532649 PYYP10082 97 aa7.1□□□□□ -1.27
CTNND1-232ENST00000532649 KLF5Q13887 457 aaPredicted RBP7.1□□□□□ -1.27
CTNND1-232ENST00000532649 RNF5Q99942 180 aa7.1□□□□□ -1.27
CTNND1-232ENST00000532649 MPDZO75970 2070 aa7.1□□□□□ -1.27
CTNND1-232ENST00000532649 PMVKQ15126 192 aa7.1□□□□□ -1.27
CTNND1-232ENST00000532649 C9orf139Q6ZV77 190 aa7.1□□□□□ -1.27
CTNND1-232ENST00000532649 IFI27L1Q96BM0 104 aa7.1□□□□□ -1.27
CTNND1-232ENST00000532649 TIMM21Q9BVV7 248 aa7.1□□□□□ -1.27
CTNND1-232ENST00000532649 PCNX1Q96RV3 2341 aa7.1□□□□□ -1.27
CTNND1-232ENST00000532649 HEATR5AQ86XA9 2040 aa7.09□□□□□ -1.27
CTNND1-232ENST00000532649 TRBV25-1A0A075B6N4 114 aa7.09□□□□□ -1.27
CTNND1-232ENST00000532649 RPL15P61313 204 aaKnown RBP7.09□□□□□ -1.27
CTNND1-232ENST00000532649 VWC2Q2TAL6 325 aa7.09□□□□□ -1.27
CTNND1-232ENST00000532649 TTC28Q96AY4 2481 aa7.09□□□□□ -1.27
CTNND1-232ENST00000532649 TRBV6-6A0A0A6YYG2 114 aa7.09□□□□□ -1.27
CTNND1-232ENST00000532649 TRAV3A0A0B4J244 114 aa7.09□□□□□ -1.27
CTNND1-232ENST00000532649 NPIPB5A8MRT5 1133 aa7.09□□□□□ -1.27
CTNND1-232ENST00000532649 SOCS3O14543 225 aa7.09□□□□□ -1.27
CTNND1-232ENST00000532649 QRFPP83859 136 aa7.09□□□□□ -1.27
CTNND1-232ENST00000532649 IFITM2Q01629 132 aa7.09□□□□□ -1.27
CTNND1-232ENST00000532649 RUSC1-AS1Q66K80 236 aa7.09□□□□□ -1.27
CTNND1-232ENST00000532649 CHAC1Q9BUX1 264 aa7.09□□□□□ -1.27
CTNND1-232ENST00000532649 LINC00473A8K010 186 aa7.09□□□□□ -1.27
CTNND1-232ENST00000532649 H0YIZ8 118 aa7.09□□□□□ -1.27
CTNND1-232ENST00000532649 CFHR3Q02985 330 aa7.09□□□□□ -1.27
CTNND1-232ENST00000532649 FOXL1Q12952 345 aa7.09□□□□□ -1.27
CTNND1-232ENST00000532649 DEFB104AQ8WTQ1 72 aa7.09□□□□□ -1.27
CTNND1-232ENST00000532649 PRDM13Q9H4Q3 707 aa7.09□□□□□ -1.27
CTNND1-232ENST00000532649 ZNF503-AS2A6NEH8 195 aa7.08□□□□□ -1.28
CTNND1-232ENST00000532649 ADMP35318 185 aa7.08□□□□□ -1.28
CTNND1-232ENST00000532649 HSD52Q0P140 79 aa7.08□□□□□ -1.28
CTNND1-232ENST00000532649 KLF17Q5JT82 389 aaPredicted RBP7.08□□□□□ -1.28
CTNND1-232ENST00000532649 ZNF329Q86UD4 541 aa7.08□□□□□ -1.28
CTNND1-232ENST00000532649 CSTL1Q9H114 145 aa7.08□□□□□ -1.28
CTNND1-232ENST00000532649 LINC00205P59089 165 aa7.08□□□□□ -1.28
CTNND1-232ENST00000532649 CT83Q5H943 113 aa7.08□□□□□ -1.28
CTNND1-232ENST00000532649 LTBP2Q14767 1821 aa7.08□□□□□ -1.28
CTNND1-232ENST00000532649 RPL23P62829 140 aaKnown RBP7.08□□□□□ -1.28
CTNND1-232ENST00000532649 CCL20P78556 96 aa7.08□□□□□ -1.28
CTNND1-232ENST00000532649 NDPQ00604 133 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms