RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 NBASA2RRP1 2371 aa4.34□□□□□ -1.71
PCF11-205ENST00000530906 A0A087X0K7 114 aa4.34□□□□□ -1.71
PCF11-205ENST00000530906 TRAV20A0A0B4J274 112 aa4.34□□□□□ -1.71
PCF11-205ENST00000530906 SNURFLB1AK76 121 aa4.34□□□□□ -1.71
PCF11-205ENST00000530906 B4DSR2 109 aa4.34□□□□□ -1.71
PCF11-205ENST00000530906 J3QLI3 93 aa4.34□□□□□ -1.71
PCF11-205ENST00000530906 MRPS12O15235 138 aaKnown RBP4.34□□□□□ -1.71
PCF11-205ENST00000530906 OR2J3O76001 311 aa4.34□□□□□ -1.71
PCF11-205ENST00000530906 P01737 135 aa4.34□□□□□ -1.71
PCF11-205ENST00000530906 APELAP0DMC3 54 aa4.34□□□□□ -1.71
PCF11-205ENST00000530906 EGR2P11161 476 aaPredicted RBP4.34□□□□□ -1.71
PCF11-205ENST00000530906 RAB4AP20338 218 aa4.34□□□□□ -1.71
PCF11-205ENST00000530906 HNF1AP20823 631 aa4.34□□□□□ -1.71
PCF11-205ENST00000530906 IER3P46695 156 aa4.34□□□□□ -1.71
PCF11-205ENST00000530906 FOXA3P55318 350 aaPredicted RBP4.34□□□□□ -1.71
PCF11-205ENST00000530906 ATP5J2P56134 94 aa4.34□□□□□ -1.71
PCF11-205ENST00000530906 TPPP2P59282 170 aa4.34□□□□□ -1.71
PCF11-205ENST00000530906 NDPQ00604 133 aa4.34□□□□□ -1.71
PCF11-205ENST00000530906 RELQ04864 619 aaPredicted RBP4.34□□□□□ -1.71
PCF11-205ENST00000530906 IQCJQ1A5X6 159 aa4.34□□□□□ -1.71
PCF11-205ENST00000530906 SAPCD1Q5SSQ6 148 aa4.34□□□□□ -1.71
PCF11-205ENST00000530906 UNQ5815/PRO19632Q6UWF5 114 aa4.34□□□□□ -1.71
PCF11-205ENST00000530906 SIGLEC15Q6ZMC9 328 aa4.34□□□□□ -1.71
PCF11-205ENST00000530906 TMEM136Q6ZRR5 245 aa4.34□□□□□ -1.71
PCF11-205ENST00000530906 DYNAPQ8N1N2 210 aa4.34□□□□□ -1.71
PCF11-205ENST00000530906 CIARTQ8N365 385 aaPredicted RBP4.34□□□□□ -1.71
PCF11-205ENST00000530906 C5orf56Q8N8D9 126 aa4.34□□□□□ -1.71
PCF11-205ENST00000530906 ZNF502Q8TBZ5 544 aa4.34□□□□□ -1.71
PCF11-205ENST00000530906 EEF1AKMT3Q96AZ1 226 aa4.34□□□□□ -1.71
PCF11-205ENST00000530906 ZNF414Q96IQ9 312 aa4.34□□□□□ -1.71
PCF11-205ENST00000530906 SLC50A1Q9BRV3 221 aa4.34□□□□□ -1.71
PCF11-205ENST00000530906 RNASE7Q9H1E1 156 aaKnown RBP4.34□□□□□ -1.71
PCF11-205ENST00000530906 GSN-AS1Q9NRJ2 163 aa4.34□□□□□ -1.71
PCF11-205ENST00000530906 SERTAD4Q9NUC0 356 aa4.34□□□□□ -1.71
PCF11-205ENST00000530906 ZNF586Q9NXT0 402 aa4.34□□□□□ -1.71
PCF11-205ENST00000530906 NCOR2Q9Y618 2525 aa4.34□□□□□ -1.72
PCF11-205ENST00000530906 BSNQ9UPA5 3926 aa4.33□□□□□ -1.72
PCF11-205ENST00000530906 RBAKDNA6NC62 111 aa4.33□□□□□ -1.72
PCF11-205ENST00000530906 TSTD3H0UI37 97 aa4.33□□□□□ -1.72
PCF11-205ENST00000530906 ATP6V0E1O15342 81 aa4.33□□□□□ -1.72
PCF11-205ENST00000530906 APCSP02743 223 aa4.33□□□□□ -1.72
PCF11-205ENST00000530906 IGF1P05019 195 aa4.33□□□□□ -1.72
PCF11-205ENST00000530906 MSMBP08118 114 aa4.33□□□□□ -1.72
PCF11-205ENST00000530906 CTSGP08311 255 aa4.33□□□□□ -1.72
PCF11-205ENST00000530906 CT45A10P0DMU9 189 aa4.33□□□□□ -1.72
PCF11-205ENST00000530906 CBLN1P23435 193 aa4.33□□□□□ -1.72
PCF11-205ENST00000530906 RPS20P60866 119 aaKnown RBP4.33□□□□□ -1.72
PCF11-205ENST00000530906 PKIAP61925 76 aa4.33□□□□□ -1.72
PCF11-205ENST00000530906 HBBP68871 147 aa4.33□□□□□ -1.72
PCF11-205ENST00000530906 SRSF2Q01130 221 aaKnown RBP4.33□□□□□ -1.72
PCF11-205ENST00000530906 PRB3Q04118 309 aaPredicted RBP4.33□□□□□ -1.72
PCF11-205ENST00000530906 PSG3Q16557 428 aa4.33□□□□□ -1.72
PCF11-205ENST00000530906 CLEC12BQ2HXU8 276 aa4.33□□□□□ -1.72
PCF11-205ENST00000530906 C19orf54Q5BKX5 351 aa4.33□□□□□ -1.72
PCF11-205ENST00000530906 GFI1BQ5VTD9 330 aa4.33□□□□□ -1.72
PCF11-205ENST00000530906 RUSC1-AS1Q66K80 236 aa4.33□□□□□ -1.72
PCF11-205ENST00000530906 C16orf54Q6UWD8 224 aa4.33□□□□□ -1.72
PCF11-205ENST00000530906 RBPMS2Q6ZRY4 209 aaKnown RBP4.33□□□□□ -1.72
PCF11-205ENST00000530906 C19orf35Q6ZS72 473 aa4.33□□□□□ -1.72
PCF11-205ENST00000530906 MRPL53Q96EL3 112 aaKnown RBP4.33□□□□□ -1.72
PCF11-205ENST00000530906 USMG5Q96IX5 58 aa4.33□□□□□ -1.72
PCF11-205ENST00000530906 FAM103A1Q9BTL3 118 aaKnown RBP4.33□□□□□ -1.72
PCF11-205ENST00000530906 HIF1ANQ9NWT6 349 aa4.33□□□□□ -1.72
PCF11-205ENST00000530906 SPENQ96T58 3664 aaKnown RBP4.33□□□□□ -1.72
PCF11-205ENST00000530906 PKD1L2Q7Z442 2459 aa4.33□□□□□ -1.72
PCF11-205ENST00000530906 ASPMQ8IZT6 3477 aa4.33□□□□□ -1.72
PCF11-205ENST00000530906 IGHV3-21A0A0B4J1V1 117 aa4.32□□□□□ -1.72
PCF11-205ENST00000530906 TRAV41A0A0B4J266 112 aa4.32□□□□□ -1.72
PCF11-205ENST00000530906 TRAV34A0A0B4J273 112 aa4.32□□□□□ -1.72
PCF11-205ENST00000530906 IGHV4-61A0A0C4DH41 118 aa4.32□□□□□ -1.72
PCF11-205ENST00000530906 A0A1B0GXF2 115 aa4.32□□□□□ -1.72
PCF11-205ENST00000530906 TMEM89A2RUT3 159 aa4.32□□□□□ -1.72
PCF11-205ENST00000530906 PCP4L1A6NKN8 68 aa4.32□□□□□ -1.72
PCF11-205ENST00000530906 HIGD1CA8MV81 97 aa4.32□□□□□ -1.72
PCF11-205ENST00000530906 DIRC3C9JPN6 131 aa4.32□□□□□ -1.72
PCF11-205ENST00000530906 SMAD7O15105 426 aaKnown RBP4.32□□□□□ -1.72
PCF11-205ENST00000530906 IGLV2-11P01706 119 aa4.32□□□□□ -1.72
PCF11-205ENST00000530906 GZMBP10144 247 aa4.32□□□□□ -1.72
PCF11-205ENST00000530906 CD24P25063 80 aa4.32□□□□□ -1.72
PCF11-205ENST00000530906 GNG5P63218 68 aa4.32□□□□□ -1.72
PCF11-205ENST00000530906 RHOGP84095 191 aa4.32□□□□□ -1.72
PCF11-205ENST00000530906 ATP5G2Q06055 141 aa4.32□□□□□ -1.72
PCF11-205ENST00000530906 FOXE3Q13461 319 aa4.32□□□□□ -1.72
PCF11-205ENST00000530906 KLF5Q13887 457 aaPredicted RBP4.32□□□□□ -1.72
PCF11-205ENST00000530906 C15orf32Q32M92 178 aa4.32□□□□□ -1.72
PCF11-205ENST00000530906 PDZD11Q5EBL8 140 aa4.32□□□□□ -1.72
PCF11-205ENST00000530906 SAMD13Q5VXD3 122 aa4.32□□□□□ -1.72
PCF11-205ENST00000530906 LEMD1Q68G75 181 aa4.32□□□□□ -1.72
PCF11-205ENST00000530906 IGFL4Q6B9Z1 124 aa4.32□□□□□ -1.72
PCF11-205ENST00000530906 TOMM20LQ6UXN7 152 aa4.32□□□□□ -1.72
PCF11-205ENST00000530906 GOLT1AQ6ZVE7 132 aa4.32□□□□□ -1.72
PCF11-205ENST00000530906 BAGE3Q86Y29 109 aa4.32□□□□□ -1.72
PCF11-205ENST00000530906 GATD1Q8NB37 220 aa4.32□□□□□ -1.72
PCF11-205ENST00000530906 NUP35Q8NFH5 326 aa4.32□□□□□ -1.72
PCF11-205ENST00000530906 BORCS7Q96B45 105 aa4.32□□□□□ -1.72
PCF11-205ENST00000530906 LINC00479Q96M42 142 aa4.32□□□□□ -1.72
PCF11-205ENST00000530906 NOL4LQ96MY1 436 aaPredicted RBP4.32□□□□□ -1.72
PCF11-205ENST00000530906 NEU1Q99519 415 aa4.32□□□□□ -1.72
PCF11-205ENST00000530906 NDFIP1Q9BT67 221 aa4.32□□□□□ -1.72
PCF11-205ENST00000530906 CHD8Q9HCK8 2581 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms