RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 KLK9Q9UKQ9 250 aa13.49□□□□□ -0.25
BRCA2-204ENST00000530893 PAM16Q9Y3D7 125 aa13.49□□□□□ -0.25
BRCA2-204ENST00000530893 EGR2P11161 476 aaPredicted RBP13.48□□□□□ -0.25
BRCA2-204ENST00000530893 NTF3P20783 257 aa13.48□□□□□ -0.25
BRCA2-204ENST00000530893 CSN1S1P47710 185 aa13.48□□□□□ -0.25
BRCA2-204ENST00000530893 Q6AWC8 147 aa13.48□□□□□ -0.25
BRCA2-204ENST00000530893 FAM19A2Q8N3H0 131 aa13.48□□□□□ -0.25
BRCA2-204ENST00000530893 NDFIP1Q9BT67 221 aa13.48□□□□□ -0.25
BRCA2-204ENST00000530893 PRORYQ9H606 182 aa13.48□□□□□ -0.25
BRCA2-204ENST00000530893 LPAR2Q9HBW0 351 aa13.48□□□□□ -0.25
BRCA2-204ENST00000530893 A0A1B0GW15 77 aa13.47□□□□□ -0.25
BRCA2-204ENST00000530893 M0QZK8 103 aa13.47□□□□□ -0.25
BRCA2-204ENST00000530893 NDUFB8O95169 186 aa13.47□□□□□ -0.25
BRCA2-204ENST00000530893 APOHP02749 345 aaPredicted RBP13.47□□□□□ -0.25
BRCA2-204ENST00000530893 SSTP61278 116 aa13.47□□□□□ -0.25
BRCA2-204ENST00000530893 S4R3C0 116 aa13.47□□□□□ -0.25
BRCA2-204ENST00000530893 NBASA2RRP1 2371 aa13.47□□□□□ -0.25
BRCA2-204ENST00000530893 CHEK1O14757 476 aa13.47□□□□□ -0.25
BRCA2-204ENST00000530893 NDUFS7O75251 213 aa13.47□□□□□ -0.25
BRCA2-204ENST00000530893 PMCHL1Q16048 86 aa13.47□□□□□ -0.25
BRCA2-204ENST00000530893 FAM110DQ8TAY7 271 aaPredicted RBP13.47□□□□□ -0.25
BRCA2-204ENST00000530893 CHCHD1Q96BP2 118 aaKnown RBP13.47□□□□□ -0.25
BRCA2-204ENST00000530893 SNHG12Q9BXW3 62 aa13.47□□□□□ -0.25
BRCA2-204ENST00000530893 ATRXP46100 2492 aa13.46□□□□□ -0.25
BRCA2-204ENST00000530893 SPTBN4Q9H254 2564 aa13.46□□□□□ -0.25
BRCA2-204ENST00000530893 M0R2Z0 102 aa13.46□□□□□ -0.25
BRCA2-204ENST00000530893 CTSGP08311 255 aa13.46□□□□□ -0.25
BRCA2-204ENST00000530893 LY6DQ14210 128 aa13.46□□□□□ -0.25
BRCA2-204ENST00000530893 ITLN2Q8WWU7 325 aaPredicted RBP13.46□□□□□ -0.25
BRCA2-204ENST00000530893 LOC102724200A0A096LPH7 203 aaPredicted RBP13.46□□□□□ -0.26
BRCA2-204ENST00000530893 A0A1B0GUT8 65 aa13.46□□□□□ -0.26
BRCA2-204ENST00000530893 FAM181BA6NEQ2 426 aa13.46□□□□□ -0.26
BRCA2-204ENST00000530893 SH2D7A6NKC9 451 aaPredicted RBP13.46□□□□□ -0.26
BRCA2-204ENST00000530893 ZNF785A8K8V0 405 aa13.46□□□□□ -0.26
BRCA2-204ENST00000530893 EREGO14944 169 aa13.46□□□□□ -0.26
BRCA2-204ENST00000530893 CT45A10P0DMU9 189 aa13.46□□□□□ -0.26
BRCA2-204ENST00000530893 RNASEKQ6P5S7 137 aaKnown RBP13.46□□□□□ -0.26
BRCA2-204ENST00000530893 COX8CQ7Z4L0 72 aa13.46□□□□□ -0.26
BRCA2-204ENST00000530893 GATD1Q8NB37 220 aa13.46□□□□□ -0.26
BRCA2-204ENST00000530893 RABAC1Q9UI14 185 aa13.46□□□□□ -0.26
BRCA2-204ENST00000530893 CTRLP40313 264 aa13.45□□□□□ -0.26
BRCA2-204ENST00000530893 LMO4P61968 165 aa13.45□□□□□ -0.26
BRCA2-204ENST00000530893 RIGQ13278 110 aa13.45□□□□□ -0.26
BRCA2-204ENST00000530893 ZNF705AQ6ZN79 300 aaPredicted RBP13.45□□□□□ -0.26
BRCA2-204ENST00000530893 AJUBAQ96IF1 538 aa13.45□□□□□ -0.26
BRCA2-204ENST00000530893 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.44□□□□□ -0.26
BRCA2-204ENST00000530893 OR2T8A6NH00 312 aa13.44□□□□□ -0.26
BRCA2-204ENST00000530893 M0R3E3 92 aa13.44□□□□□ -0.26
BRCA2-204ENST00000530893 OVOL3O00110 214 aa13.44□□□□□ -0.26
BRCA2-204ENST00000530893 BTF3P20290 206 aaKnown RBP13.44□□□□□ -0.26
BRCA2-204ENST00000530893 RAB9AP51151 201 aa13.44□□□□□ -0.26
BRCA2-204ENST00000530893 SAPCD1Q5SSQ6 148 aa13.44□□□□□ -0.26
BRCA2-204ENST00000530893 BCL6BQ8N143 479 aaPredicted RBP13.44□□□□□ -0.26
BRCA2-204ENST00000530893 SAA4P35542 130 aa13.43□□□□□ -0.26
BRCA2-204ENST00000530893 TMUB1Q9BVT8 246 aa13.43□□□□□ -0.26
BRCA2-204ENST00000530893 BPESC1Q9GZL8 116 aa13.43□□□□□ -0.26
BRCA2-204ENST00000530893 HIVEP3Q5T1R4 2406 aa13.43□□□□□ -0.26
BRCA2-204ENST00000530893 CRIP1P50238 77 aa13.42□□□□□ -0.26
BRCA2-204ENST00000530893 NUTF2P61970 127 aaKnown RBP13.42□□□□□ -0.26
BRCA2-204ENST00000530893 SPATA45Q537H7 98 aa13.42□□□□□ -0.26
BRCA2-204ENST00000530893 KLHDC1Q8N7A1 406 aa13.42□□□□□ -0.26
BRCA2-204ENST00000530893 URB1-AS1Q96HZ7 61 aa13.42□□□□□ -0.26
BRCA2-204ENST00000530893 COL6A6A6NMZ7 2263 aa13.42□□□□□ -0.26
BRCA2-204ENST00000530893 UNQ5815/PRO19632Q6UWF5 114 aa13.42□□□□□ -0.26
BRCA2-204ENST00000530893 ZNF502Q8TBZ5 544 aa13.42□□□□□ -0.26
BRCA2-204ENST00000530893 FAM120AOSQ5T036 256 aa13.41□□□□□ -0.26
BRCA2-204ENST00000530893 C20orf202A1L168 122 aa13.4□□□□□ -0.26
BRCA2-204ENST00000530893 C2orf70A6NJV1 201 aa13.4□□□□□ -0.26
BRCA2-204ENST00000530893 IGHV3-23P01764 117 aa13.4□□□□□ -0.26
BRCA2-204ENST00000530893 LINC00614P0C842 121 aa13.4□□□□□ -0.26
BRCA2-204ENST00000530893 C15orf32Q32M92 178 aa13.4□□□□□ -0.26
BRCA2-204ENST00000530893 EBLN2Q6P2I7 272 aa13.4□□□□□ -0.26
BRCA2-204ENST00000530893 Q71RC1 249 aaPredicted RBP13.4□□□□□ -0.26
BRCA2-204ENST00000530893 SPTBN1Q01082 2364 aaKnown RBP13.4□□□□□ -0.26
BRCA2-204ENST00000530893 CENPVL3A0A0U1RRI6 287 aa13.4□□□□□ -0.26
BRCA2-204ENST00000530893 NPFFO15130 113 aa13.4□□□□□ -0.26
BRCA2-204ENST00000530893 CRXO43186 299 aaPredicted RBP13.4□□□□□ -0.26
BRCA2-204ENST00000530893 OR5AL1P0C617 328 aa13.4□□□□□ -0.26
BRCA2-204ENST00000530893 UQCR10Q9UDW1 63 aa13.4□□□□□ -0.26
BRCA2-204ENST00000530893 ATP6V0E1O15342 81 aa13.39□□□□□ -0.27
BRCA2-204ENST00000530893 ARMS2P0C7Q2 107 aa13.39□□□□□ -0.27
BRCA2-204ENST00000530893 A0A087X0K7 114 aa13.39□□□□□ -0.27
BRCA2-204ENST00000530893 RHOGP84095 191 aa13.39□□□□□ -0.27
BRCA2-204ENST00000530893 ECSCRQ19T08 205 aa13.39□□□□□ -0.27
BRCA2-204ENST00000530893 ZNF493Q6ZR52 646 aa13.39□□□□□ -0.27
BRCA2-204ENST00000530893 C8orf49Q96NF6 230 aa13.39□□□□□ -0.27
BRCA2-204ENST00000530893 TMEM70Q9BUB7 260 aa13.39□□□□□ -0.27
BRCA2-204ENST00000530893 SMAD5-AS1Q9Y6J3 95 aa13.39□□□□□ -0.27
BRCA2-204ENST00000530893 WNK2Q9Y3S1 2297 aa13.38□□□□□ -0.27
BRCA2-204ENST00000530893 IGHV1-24A0A0C4DH33 117 aa13.38□□□□□ -0.27
BRCA2-204ENST00000530893 TMEM189A5PLL7 270 aa13.38□□□□□ -0.27
BRCA2-204ENST00000530893 GOSR1O95249 250 aa13.38□□□□□ -0.27
BRCA2-204ENST00000530893 IGLC3P0DOY3 106 aa13.38□□□□□ -0.27
BRCA2-204ENST00000530893 PRR25Q96S07 402 aa13.38□□□□□ -0.27
BRCA2-204ENST00000530893 GPR183P32249 361 aa13.37□□□□□ -0.27
BRCA2-204ENST00000530893 BMI1P35226 326 aa13.37□□□□□ -0.27
BRCA2-204ENST00000530893 RPS20P60866 119 aaKnown RBP13.37□□□□□ -0.27
BRCA2-204ENST00000530893 RELQ04864 619 aaPredicted RBP13.37□□□□□ -0.27
BRCA2-204ENST00000530893 ATP6V0BQ99437 205 aa13.37□□□□□ -0.27
BRCA2-204ENST00000530893 ZFAND3Q9H8U3 227 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms