RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 TMEM231Q9H6L2 316 aa4.61□□□□□ -1.67
CSDE1-213ENST00000530784 ANAPC10Q9UM13 185 aa4.61□□□□□ -1.67
CSDE1-213ENST00000530784 TRAV2A0A0B4J234 112 aa4.6□□□□□ -1.67
CSDE1-213ENST00000530784 IGHV3-66A0A0C4DH42 116 aa4.6□□□□□ -1.67
CSDE1-213ENST00000530784 IGLL5B9A064 214 aa4.6□□□□□ -1.67
CSDE1-213ENST00000530784 PRSS3P35030 304 aa4.6□□□□□ -1.67
CSDE1-213ENST00000530784 HRH1P35367 487 aa4.6□□□□□ -1.67
CSDE1-213ENST00000530784 TSPAN5P62079 268 aa4.6□□□□□ -1.67
CSDE1-213ENST00000530784 ERHP84090 104 aaKnown RBP4.6□□□□□ -1.67
CSDE1-213ENST00000530784 NEDD8Q15843 81 aa4.6□□□□□ -1.67
CSDE1-213ENST00000530784 TMEM41BQ5BJD5 291 aa4.6□□□□□ -1.67
CSDE1-213ENST00000530784 LPCAT3Q6P1A2 487 aa4.6□□□□□ -1.67
CSDE1-213ENST00000530784 TOMM20LQ6UXN7 152 aa4.6□□□□□ -1.67
CSDE1-213ENST00000530784 H2BFWTQ7Z2G1 175 aa4.6□□□□□ -1.67
CSDE1-213ENST00000530784 Q8NAQ8 132 aa4.6□□□□□ -1.67
CSDE1-213ENST00000530784 DUSP18Q8NEJ0 188 aa4.6□□□□□ -1.67
CSDE1-213ENST00000530784 MRGPRFQ96AM1 343 aa4.6□□□□□ -1.67
CSDE1-213ENST00000530784 MS4A6AQ9H2W1 248 aa4.6□□□□□ -1.67
CSDE1-213ENST00000530784 VSIRQ9H7M9 311 aa4.6□□□□□ -1.67
CSDE1-213ENST00000530784 RABAC1Q9UI14 185 aa4.6□□□□□ -1.67
CSDE1-213ENST00000530784 PUS1Q9Y606 427 aaKnown RBP eCLIP4.6□□□□□ -1.67
CSDE1-213ENST00000530784 HERC2O95714 4834 aa4.6□□□□□ -1.67
CSDE1-213ENST00000530784 TRAV10A0A0B4J240 114 aa4.59□□□□□ -1.67
CSDE1-213ENST00000530784 H3BTX0 84 aa4.59□□□□□ -1.67
CSDE1-213ENST00000530784 CORTO00230 105 aa4.59□□□□□ -1.67
CSDE1-213ENST00000530784 SCGB2A1O75556 95 aa4.59□□□□□ -1.67
CSDE1-213ENST00000530784 MIFP14174 115 aa4.59□□□□□ -1.67
CSDE1-213ENST00000530784 NPPCP23582 126 aa4.59□□□□□ -1.67
CSDE1-213ENST00000530784 HLA-DMAP28067 261 aa4.59□□□□□ -1.67
CSDE1-213ENST00000530784 SNCAP37840 140 aa4.59□□□□□ -1.67
CSDE1-213ENST00000530784 HSPE1P61604 102 aaKnown RBP4.59□□□□□ -1.67
CSDE1-213ENST00000530784 SPINK9Q5DT21 86 aa4.59□□□□□ -1.67
CSDE1-213ENST00000530784 MORN3Q6PF18 240 aaPredicted RBP4.59□□□□□ -1.67
CSDE1-213ENST00000530784 FAM24BQ8N5W8 94 aa4.59□□□□□ -1.67
CSDE1-213ENST00000530784 SLC35G3Q8N808 338 aa4.59□□□□□ -1.67
CSDE1-213ENST00000530784 STXBP6Q8NFX7 210 aa4.59□□□□□ -1.67
CSDE1-213ENST00000530784 SEC22AQ96IW7 307 aa4.59□□□□□ -1.67
CSDE1-213ENST00000530784 SPXQ9BT56 116 aa4.59□□□□□ -1.67
CSDE1-213ENST00000530784 APLNQ9ULZ1 77 aa4.59□□□□□ -1.67
CSDE1-213ENST00000530784 IGKV1-39P01597 117 aa4.58□□□□□ -1.68
CSDE1-213ENST00000530784 IGKV1D-39P04432 117 aa4.58□□□□□ -1.68
CSDE1-213ENST00000530784 ZNF688P0C7X2 276 aa4.58□□□□□ -1.68
CSDE1-213ENST00000530784 ELK1P19419 428 aa4.58□□□□□ -1.68
CSDE1-213ENST00000530784 HLA-DMBP28068 263 aa4.58□□□□□ -1.68
CSDE1-213ENST00000530784 RCVRNP35243 200 aa4.58□□□□□ -1.68
CSDE1-213ENST00000530784 TGFBR1P36897 503 aa4.58□□□□□ -1.68
CSDE1-213ENST00000530784 AKR1C2P52895 323 aa4.58□□□□□ -1.68
CSDE1-213ENST00000530784 SUB1P53999 127 aaKnown RBP eCLIP4.58□□□□□ -1.68
CSDE1-213ENST00000530784 LINC00336Q6ZUF6 198 aa4.58□□□□□ -1.68
CSDE1-213ENST00000530784 NARS2Q96I59 477 aaKnown RBP4.58□□□□□ -1.68
CSDE1-213ENST00000530784 METTL26Q96S19 204 aa4.58□□□□□ -1.68
CSDE1-213ENST00000530784 PDCD10Q9BUL8 212 aa4.58□□□□□ -1.68
CSDE1-213ENST00000530784 FRAS1Q86XX4 4008 aa4.57□□□□□ -1.68
CSDE1-213ENST00000530784 SMIM31A0A1B0GVY4 71 aa4.57□□□□□ -1.68
CSDE1-213ENST00000530784 FBLL1A6NHQ2 334 aaKnown RBP4.57□□□□□ -1.68
CSDE1-213ENST00000530784 KNCNA6PVL3 124 aa4.57□□□□□ -1.68
CSDE1-213ENST00000530784 ZNF705EA8MWA4 302 aaPredicted RBP4.57□□□□□ -1.68
CSDE1-213ENST00000530784 INS-IGF2F8WCM5 200 aa4.57□□□□□ -1.68
CSDE1-213ENST00000530784 ATG12O94817 140 aa4.57□□□□□ -1.68
CSDE1-213ENST00000530784 TMEM50AO95807 157 aa4.57□□□□□ -1.68
CSDE1-213ENST00000530784 IFNA17P01571 189 aa4.57□□□□□ -1.68
CSDE1-213ENST00000530784 RBMY1A1P0DJD3 496 aaKnown RBP4.57□□□□□ -1.68
CSDE1-213ENST00000530784 RBMY1CP0DJD4 496 aa4.57□□□□□ -1.68
CSDE1-213ENST00000530784 OPRK1P41145 380 aa4.57□□□□□ -1.68
CSDE1-213ENST00000530784 P2RY1P47900 373 aa4.57□□□□□ -1.68
CSDE1-213ENST00000530784 EIF2B2P49770 351 aaKnown RBP4.57□□□□□ -1.68
CSDE1-213ENST00000530784 RBMY1FQ15415 496 aaKnown RBP4.57□□□□□ -1.68
CSDE1-213ENST00000530784 KCTD21Q4G0X4 260 aa4.57□□□□□ -1.68
CSDE1-213ENST00000530784 ACTL10Q5JWF8 245 aa4.57□□□□□ -1.68
CSDE1-213ENST00000530784 GPX8Q8TED1 209 aa4.57□□□□□ -1.68
CSDE1-213ENST00000530784 TMEM230Q96A57 120 aa4.57□□□□□ -1.68
CSDE1-213ENST00000530784 RNF126Q9BV68 326 aa4.57□□□□□ -1.68
CSDE1-213ENST00000530784 ENY2Q9NPA8 101 aa4.57□□□□□ -1.68
CSDE1-213ENST00000530784 TBC1D24Q9ULP9 559 aa4.57□□□□□ -1.68
CSDE1-213ENST00000530784 KIAA1109Q2LD37 5005 aa4.57□□□□□ -1.68
CSDE1-213ENST00000530784 HELTA6NFD8 242 aa4.56□□□□□ -1.68
CSDE1-213ENST00000530784 IGKV1-5P01602 117 aa4.56□□□□□ -1.68
CSDE1-213ENST00000530784 RNASE2P10153 161 aaKnown RBP4.56□□□□□ -1.68
CSDE1-213ENST00000530784 CRYBB3P26998 211 aa4.56□□□□□ -1.68
CSDE1-213ENST00000530784 ETV6P41212 452 aa4.56□□□□□ -1.68
CSDE1-213ENST00000530784 RND3P61587 244 aa4.56□□□□□ -1.68
CSDE1-213ENST00000530784 LSM3P62310 102 aaKnown RBP4.56□□□□□ -1.68
CSDE1-213ENST00000530784 TRIM16LQ309B1 348 aa4.56□□□□□ -1.68
CSDE1-213ENST00000530784 PSMG4Q5JS54 123 aa4.56□□□□□ -1.68
CSDE1-213ENST00000530784 PVRIGQ6DKI7 326 aa4.56□□□□□ -1.68
CSDE1-213ENST00000530784 SNX29P2Q8IUI4 249 aa4.56□□□□□ -1.68
CSDE1-213ENST00000530784 OR4X1Q8NH49 305 aa4.56□□□□□ -1.68
CSDE1-213ENST00000530784 RNASE11Q8TAA1 199 aaKnown RBP4.56□□□□□ -1.68
CSDE1-213ENST00000530784 DCANP1Q8TF63 244 aa4.56□□□□□ -1.68
CSDE1-213ENST00000530784 TP53RKQ96S44 253 aa4.56□□□□□ -1.68
CSDE1-213ENST00000530784 KIR2DL4Q99706 377 aa4.56□□□□□ -1.68
CSDE1-213ENST00000530784 VCX3AQ9NNX9 186 aa4.56□□□□□ -1.68
CSDE1-213ENST00000530784 COMMD3Q9UBI1 195 aa4.56□□□□□ -1.68
CSDE1-213ENST00000530784 TRAV30A0A087WSZ9 112 aa4.55□□□□□ -1.68
CSDE1-213ENST00000530784 DEFB131BA0A096LNP1 70 aa4.55□□□□□ -1.68
CSDE1-213ENST00000530784 C3orf85A0A1B0GTC6 90 aa4.55□□□□□ -1.68
CSDE1-213ENST00000530784 ZFP92A6NM28 416 aa4.55□□□□□ -1.68
CSDE1-213ENST00000530784 APOA1P02647 267 aa4.55□□□□□ -1.68
CSDE1-213ENST00000530784 P0DMU3 169 aa4.55□□□□□ -1.68
CSDE1-213ENST00000530784 FAM231AP0DMU4 169 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms