RNA–Protein interactions for RNA: ENST00000529999.5

PUF60-215, Transcript of poly(U) binding splicing factor 60, human

TSL 3

Gene PUF60, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUF60-215	ENST00000529999	HBE1	P02100	147 aa		10.83	□□□□□ -0.68
PUF60-215	ENST00000529999	ARL14EPL	P0DKL9	152 aa		10.83	□□□□□ -0.68
PUF60-215	ENST00000529999	IGLC2	P0DOY2	106 aa		10.83	□□□□□ -0.68
PUF60-215	ENST00000529999	HIST1H1E	P10412	219 aa	Known RBP	10.83	□□□□□ -0.68
PUF60-215	ENST00000529999	MEOX2	P50222	304 aa		10.83	□□□□□ -0.68
PUF60-215	ENST00000529999	C9orf66	Q5T8R8	295 aa		10.83	□□□□□ -0.68
PUF60-215	ENST00000529999	TCF24	Q7RTU0	167 aa		10.83	□□□□□ -0.68
PUF60-215	ENST00000529999	SFT2D1	Q8WV19	159 aa		10.83	□□□□□ -0.68
PUF60-215	ENST00000529999	PRR25	Q96S07	402 aa		10.83	□□□□□ -0.68
PUF60-215	ENST00000529999	PAXX	Q9BUH6	204 aa		10.83	□□□□□ -0.68
PUF60-215	ENST00000529999	HRH4	Q9H3N8	390 aa		10.83	□□□□□ -0.68
PUF60-215	ENST00000529999	TEX46	H3BTG2	121 aa		10.82	□□□□□ -0.68
PUF60-215	ENST00000529999	HMGB3	O15347	200 aa	Known RBP	10.82	□□□□□ -0.68
PUF60-215	ENST00000529999	PMS2P11	Q13670	270 aa		10.82	□□□□□ -0.68
PUF60-215	ENST00000529999	GUK1	Q16774	197 aa		10.82	□□□□□ -0.68
PUF60-215	ENST00000529999	LCN15	Q6UWW0	184 aa		10.82	□□□□□ -0.68
PUF60-215	ENST00000529999	DYNLRB2	Q8TF09	96 aa		10.82	□□□□□ -0.68
PUF60-215	ENST00000529999	FXYD5	Q96DB9	178 aa		10.82	□□□□□ -0.68
PUF60-215	ENST00000529999	C17orf77	Q96MU5	243 aa		10.82	□□□□□ -0.68
PUF60-215	ENST00000529999	TRAV2	A0A0B4J234	112 aa		10.81	□□□□□ -0.68
PUF60-215	ENST00000529999	TSPAN4	O14817	238 aa		10.81	□□□□□ -0.68
PUF60-215	ENST00000529999	ZNF253	O75346	499 aa		10.81	□□□□□ -0.68
PUF60-215	ENST00000529999	EIF3G	O75821	320 aa	Known RBP eCLIP	10.81	□□□□□ -0.68
PUF60-215	ENST00000529999	NMB	P08949	121 aa		10.81	□□□□□ -0.68
PUF60-215	ENST00000529999	PYY	P10082	97 aa		10.81	□□□□□ -0.68
PUF60-215	ENST00000529999	GCHFR	P30047	84 aa		10.81	□□□□□ -0.68
PUF60-215	ENST00000529999	PSMB3	P49720	205 aa		10.81	□□□□□ -0.68
PUF60-215	ENST00000529999	PDE6H	Q13956	83 aa		10.81	□□□□□ -0.68
PUF60-215	ENST00000529999	TMEM167B	Q9NRX6	74 aa		10.81	□□□□□ -0.68
PUF60-215	ENST00000529999	ZNF586	Q9NXT0	402 aa		10.81	□□□□□ -0.68
PUF60-215	ENST00000529999		H3BQ15	152 aa		10.8	□□□□□ -0.68
PUF60-215	ENST00000529999	NBEAP1	P0C6P0	100 aa		10.8	□□□□□ -0.68
PUF60-215	ENST00000529999	ATF4	P18848	351 aa	Predicted RBP	10.8	□□□□□ -0.68
PUF60-215	ENST00000529999	FGF8	P55075	233 aa	Predicted RBP	10.8	□□□□□ -0.68
PUF60-215	ENST00000529999	UBE2L3	P68036	154 aa	Known RBP	10.8	□□□□□ -0.68
PUF60-215	ENST00000529999	CD300E	Q496F6	205 aa	Predicted RBP	10.8	□□□□□ -0.68
PUF60-215	ENST00000529999	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		10.8	□□□□□ -0.68
PUF60-215	ENST00000529999	TMEM61	Q8N0U2	210 aa		10.8	□□□□□ -0.68
PUF60-215	ENST00000529999	NRN1	Q9NPD7	142 aa		10.8	□□□□□ -0.68
PUF60-215	ENST00000529999	TRBV19	A0A075B6N1	114 aa		10.79	□□□□□ -0.68
PUF60-215	ENST00000529999	ZNF785	A8K8V0	405 aa		10.79	□□□□□ -0.68
PUF60-215	ENST00000529999	OR10J4	P0C629	311 aa		10.79	□□□□□ -0.68
PUF60-215	ENST00000529999	PPT1	P50897	306 aa		10.79	□□□□□ -0.68
PUF60-215	ENST00000529999	CLLU1	Q5K131	121 aa		10.79	□□□□□ -0.68
PUF60-215	ENST00000529999	SAMD13	Q5VXD3	122 aa		10.79	□□□□□ -0.68
PUF60-215	ENST00000529999	RBPMS2	Q6ZRY4	209 aa	Known RBP	10.79	□□□□□ -0.68
PUF60-215	ENST00000529999	LYPD1	Q8N2G4	141 aa		10.79	□□□□□ -0.68
PUF60-215	ENST00000529999	DCANP1	Q8TF63	244 aa		10.79	□□□□□ -0.68
PUF60-215	ENST00000529999	SPAG8	Q99932	426 aa	Predicted RBP	10.79	□□□□□ -0.68
PUF60-215	ENST00000529999	ARL2-SNX15	V9GYD0	113 aa		10.79	□□□□□ -0.68
PUF60-215	ENST00000529999	SOCS3	O14543	225 aa		10.78	□□□□□ -0.68
PUF60-215	ENST00000529999	RAB14	P61106	215 aa		10.78	□□□□□ -0.68
PUF60-215	ENST00000529999	RPL11	P62913	178 aa	Known RBP	10.78	□□□□□ -0.68
PUF60-215	ENST00000529999	PAFAH1B2	P68402	229 aa		10.78	□□□□□ -0.68
PUF60-215	ENST00000529999	CCL20	P78556	96 aa		10.78	□□□□□ -0.68
PUF60-215	ENST00000529999	CASC10	Q5T4H9	136 aa		10.78	□□□□□ -0.68
PUF60-215	ENST00000529999	LCN12	Q6JVE5	192 aa		10.78	□□□□□ -0.68
PUF60-215	ENST00000529999	MUC7	Q8TAX7	377 aa		10.78	□□□□□ -0.68
PUF60-215	ENST00000529999	SLC50A1	Q9BRV3	221 aa		10.78	□□□□□ -0.68
PUF60-215	ENST00000529999	MS4A6A	Q9H2W1	248 aa		10.78	□□□□□ -0.68
PUF60-215	ENST00000529999	TMPRSS5	Q9H3S3	457 aa		10.78	□□□□□ -0.68
PUF60-215	ENST00000529999		A0A1W2PRE2	83 aa		10.77	□□□□□ -0.69
PUF60-215	ENST00000529999		K7EQG2	157 aa		10.77	□□□□□ -0.69
PUF60-215	ENST00000529999	NDUFB4	O95168	129 aa		10.77	□□□□□ -0.69
PUF60-215	ENST00000529999	ZNF331	Q9NQX6	463 aa	Predicted RBP	10.77	□□□□□ -0.69
PUF60-215	ENST00000529999	CLEC5A	Q9NY25	188 aa		10.77	□□□□□ -0.69
PUF60-215	ENST00000529999	ZNF256	Q9Y2P7	627 aa	Predicted RBP	10.77	□□□□□ -0.69
PUF60-215	ENST00000529999	SORL1	Q92673	2214 aa		10.76	□□□□□ -0.69
PUF60-215	ENST00000529999	IZUMO1R	A6ND01	250 aa		10.76	□□□□□ -0.69
PUF60-215	ENST00000529999	ISLR	O14498	428 aa		10.76	□□□□□ -0.69
PUF60-215	ENST00000529999	PSG9	Q00887	426 aa		10.76	□□□□□ -0.69
PUF60-215	ENST00000529999	BLNK	Q8WV28	456 aa		10.76	□□□□□ -0.69
PUF60-215	ENST00000529999	NKX6-2	Q9C056	277 aa	Predicted RBP	10.76	□□□□□ -0.69
PUF60-215	ENST00000529999	MANBAL	Q9NQG1	85 aa		10.76	□□□□□ -0.69
PUF60-215	ENST00000529999		A0A1B0GV50	99 aa		10.75	□□□□□ -0.69
PUF60-215	ENST00000529999	OR4C46	A6NHA9	309 aa		10.75	□□□□□ -0.69
PUF60-215	ENST00000529999	DNASE2	O00115	360 aa	Predicted RBP	10.75	□□□□□ -0.69
PUF60-215	ENST00000529999	SLC17A3	O00476	420 aa		10.75	□□□□□ -0.69
PUF60-215	ENST00000529999	IQCF2	Q8IXL9	164 aa		10.75	□□□□□ -0.69
PUF60-215	ENST00000529999	ARL6IP6	Q8N6S5	226 aa		10.75	□□□□□ -0.69
PUF60-215	ENST00000529999	PCNP	Q8WW12	178 aa	Known RBP	10.75	□□□□□ -0.69
PUF60-215	ENST00000529999	RCHY1	Q96PM5	261 aa		10.75	□□□□□ -0.69
PUF60-215	ENST00000529999	TXNDC17	Q9BRA2	123 aa		10.75	□□□□□ -0.69
PUF60-215	ENST00000529999	SELENOK	Q9Y6D0	94 aa		10.75	□□□□□ -0.69
PUF60-215	ENST00000529999	IGKV3-7	A0A075B6H7	116 aa		10.74	□□□□□ -0.69
PUF60-215	ENST00000529999	TRAV8-2	A0A0B4J237	113 aa		10.74	□□□□□ -0.69
PUF60-215	ENST00000529999	FAM74A7	A6NL05	159 aa		10.74	□□□□□ -0.69
PUF60-215	ENST00000529999	IFNA1	P01562	189 aa		10.74	□□□□□ -0.69
PUF60-215	ENST00000529999	SNRPC	P09234	159 aa	Known RBP	10.74	□□□□□ -0.69
PUF60-215	ENST00000529999	TAGLN2	P37802	199 aa	Known RBP	10.74	□□□□□ -0.69
PUF60-215	ENST00000529999	ID1	P41134	155 aa		10.74	□□□□□ -0.69
PUF60-215	ENST00000529999	RAN	P62826	216 aa	Known RBP	10.74	□□□□□ -0.69
PUF60-215	ENST00000529999	GBGT1	Q8N5D6	347 aa		10.74	□□□□□ -0.69
PUF60-215	ENST00000529999	MRPL53	Q96EL3	112 aa	Known RBP	10.74	□□□□□ -0.69
PUF60-215	ENST00000529999	C16orf92	Q96LL3	132 aa		10.74	□□□□□ -0.69
PUF60-215	ENST00000529999	FAM110A	Q9BQ89	295 aa		10.74	□□□□□ -0.69
PUF60-215	ENST00000529999	OTOR	Q9NRC9	128 aa		10.74	□□□□□ -0.69
PUF60-215	ENST00000529999	RYR2	Q92736	4967 aa		10.73	□□□□□ -0.69
PUF60-215	ENST00000529999		H3BTX0	84 aa		10.73	□□□□□ -0.69
PUF60-215	ENST00000529999	FAM210A	Q96ND0	272 aa		10.73	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 269.5 ms