RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

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Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 PGLYRP4Q96LB8 373 aa12□□□□□ -0.49
USH1C-207ENST00000527720 CD33P20138 364 aa12□□□□□ -0.49
USH1C-207ENST00000527720 PMCHP20382 165 aa12□□□□□ -0.49
USH1C-207ENST00000527720 FAM120AOSQ5T036 256 aa12□□□□□ -0.49
USH1C-207ENST00000527720 OR2D3Q8NGH3 330 aa12□□□□□ -0.49
USH1C-207ENST00000527720 ZC2HC1AQ96GY0 325 aa12□□□□□ -0.49
USH1C-207ENST00000527720 C20orf144Q9BQM9 153 aa12□□□□□ -0.49
USH1C-207ENST00000527720 SSBP4Q9BWG4 385 aaPredicted RBP12□□□□□ -0.49
USH1C-207ENST00000527720 RABAC1Q9UI14 185 aa12□□□□□ -0.49
USH1C-207ENST00000527720 OR2T8A6NH00 312 aa11.99□□□□□ -0.49
USH1C-207ENST00000527720 FBLL1A6NHQ2 334 aaKnown RBP11.99□□□□□ -0.49
USH1C-207ENST00000527720 HAX1O00165 279 aa11.99□□□□□ -0.49
USH1C-207ENST00000527720 GOSR1O95249 250 aa11.99□□□□□ -0.49
USH1C-207ENST00000527720 CSN1S1P47710 185 aa11.99□□□□□ -0.49
USH1C-207ENST00000527720 NPFFO15130 113 aa11.99□□□□□ -0.49
USH1C-207ENST00000527720 NIT1Q86X76 327 aa11.99□□□□□ -0.49
USH1C-207ENST00000527720 KRTDAPP60985 99 aa11.98□□□□□ -0.49
USH1C-207ENST00000527720 UNQ5815/PRO19632Q6UWF5 114 aa11.98□□□□□ -0.49
USH1C-207ENST00000527720 BCL6BQ8N143 479 aaPredicted RBP11.98□□□□□ -0.49
USH1C-207ENST00000527720 SPOCK3Q9BQ16 436 aa11.98□□□□□ -0.49
USH1C-207ENST00000527720 C2orf88Q9BSF0 95 aa11.98□□□□□ -0.49
USH1C-207ENST00000527720 ZNF785A8K8V0 405 aa11.98□□□□□ -0.49
USH1C-207ENST00000527720 HSBP1O75506 76 aa11.98□□□□□ -0.49
USH1C-207ENST00000527720 Q6AWC8 147 aa11.98□□□□□ -0.49
USH1C-207ENST00000527720 ZNF502Q8TBZ5 544 aa11.98□□□□□ -0.49
USH1C-207ENST00000527720 BORCS7Q96B45 105 aa11.98□□□□□ -0.49
USH1C-207ENST00000527720 VAMP8Q9BV40 100 aa11.98□□□□□ -0.49
USH1C-207ENST00000527720 TMUB1Q9BVT8 246 aa11.98□□□□□ -0.49
USH1C-207ENST00000527720 NCOR2Q9Y618 2525 aa11.98□□□□□ -0.49
USH1C-207ENST00000527720 CENPVL3A0A0U1RRI6 287 aa11.97□□□□□ -0.49
USH1C-207ENST00000527720 APOHP02749 345 aaPredicted RBP11.97□□□□□ -0.49
USH1C-207ENST00000527720 RAB9AP51151 201 aa11.97□□□□□ -0.49
USH1C-207ENST00000527720 DMRTA1Q5VZB9 504 aa11.97□□□□□ -0.49
USH1C-207ENST00000527720 COX8CQ7Z4L0 72 aa11.97□□□□□ -0.49
USH1C-207ENST00000527720 Q8N976 141 aa11.97□□□□□ -0.49
USH1C-207ENST00000527720 RNF114Q9Y508 228 aa11.97□□□□□ -0.49
USH1C-207ENST00000527720 A0A1B0GW15 77 aa11.97□□□□□ -0.49
USH1C-207ENST00000527720 M0R3E3 92 aa11.97□□□□□ -0.49
USH1C-207ENST00000527720 ATP6V0E1O15342 81 aa11.97□□□□□ -0.49
USH1C-207ENST00000527720 IGHV3-23P01764 117 aa11.97□□□□□ -0.49
USH1C-207ENST00000527720 NDFIP1Q9BT67 221 aa11.97□□□□□ -0.49
USH1C-207ENST00000527720 CHD8Q9HCK8 2581 aa11.96□□□□□ -0.49
USH1C-207ENST00000527720 SH2D7A6NKC9 451 aaPredicted RBP11.96□□□□□ -0.49
USH1C-207ENST00000527720 CHEK1O14757 476 aa11.96□□□□□ -0.49
USH1C-207ENST00000527720 IGHV4-39P01824 125 aa11.96□□□□□ -0.49
USH1C-207ENST00000527720 CT45A10P0DMU9 189 aa11.96□□□□□ -0.49
USH1C-207ENST00000527720 GATD1Q8NB37 220 aa11.96□□□□□ -0.49
USH1C-207ENST00000527720 A0A1B0GUT8 65 aa11.95□□□□□ -0.5
USH1C-207ENST00000527720 PAX8Q06710 450 aa11.95□□□□□ -0.5
USH1C-207ENST00000527720 ECSCRQ19T08 205 aa11.95□□□□□ -0.5
USH1C-207ENST00000527720 C15orf32Q32M92 178 aa11.95□□□□□ -0.5
USH1C-207ENST00000527720 CYB5R2Q6BCY4 276 aa11.95□□□□□ -0.5
USH1C-207ENST00000527720 MRPL52Q86TS9 123 aaKnown RBP11.95□□□□□ -0.5
USH1C-207ENST00000527720 FAM19A2Q8N3H0 131 aa11.95□□□□□ -0.5
USH1C-207ENST00000527720 C3orf79P0CE67 100 aa11.95□□□□□ -0.5
USH1C-207ENST00000527720 RAB4AP20338 218 aa11.95□□□□□ -0.5
USH1C-207ENST00000527720 NTF3P20783 257 aa11.95□□□□□ -0.5
USH1C-207ENST00000527720 RIGQ13278 110 aa11.95□□□□□ -0.5
USH1C-207ENST00000527720 SAPCD1Q5SSQ6 148 aa11.95□□□□□ -0.5
USH1C-207ENST00000527720 PIP4P2Q8N4L2 257 aa11.95□□□□□ -0.5
USH1C-207ENST00000527720 CHCHD1Q96BP2 118 aaKnown RBP11.95□□□□□ -0.5
USH1C-207ENST00000527720 ITPR1Q14643 2758 aa11.95□□□□□ -0.5
USH1C-207ENST00000527720 LOC102724200A0A096LPH7 203 aaPredicted RBP11.94□□□□□ -0.5
USH1C-207ENST00000527720 RHOGP84095 191 aa11.94□□□□□ -0.5
USH1C-207ENST00000527720 MIEN1Q9BRT3 115 aa11.94□□□□□ -0.5
USH1C-207ENST00000527720 M0R2Z0 102 aa11.94□□□□□ -0.5
USH1C-207ENST00000527720 CRIP1P50238 77 aa11.94□□□□□ -0.5
USH1C-207ENST00000527720 TDRG1Q3Y452 100 aa11.94□□□□□ -0.5
USH1C-207ENST00000527720 RNASEKQ6P5S7 137 aaKnown RBP11.94□□□□□ -0.5
USH1C-207ENST00000527720 Q71RC1 249 aaPredicted RBP11.94□□□□□ -0.5
USH1C-207ENST00000527720 C5orf56Q8N8D9 126 aa11.94□□□□□ -0.5
USH1C-207ENST00000527720 MED13LQ71F56 2210 aa11.94□□□□□ -0.5
USH1C-207ENST00000527720 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.93□□□□□ -0.5
USH1C-207ENST00000527720 SSTP61278 116 aa11.93□□□□□ -0.5
USH1C-207ENST00000527720 ATP6V0BQ99437 205 aa11.93□□□□□ -0.5
USH1C-207ENST00000527720 PIMREGQ9BSJ6 248 aa11.93□□□□□ -0.5
USH1C-207ENST00000527720 ZFAND3Q9H8U3 227 aa11.93□□□□□ -0.5
USH1C-207ENST00000527720 PAM16Q9Y3D7 125 aa11.93□□□□□ -0.5
USH1C-207ENST00000527720 SMAD5-AS1Q9Y6J3 95 aa11.93□□□□□ -0.5
USH1C-207ENST00000527720 A0A087X0K7 114 aa11.93□□□□□ -0.5
USH1C-207ENST00000527720 GPR183P32249 361 aa11.93□□□□□ -0.5
USH1C-207ENST00000527720 TRBV7-1A0A0A6YYK4 115 aa11.92□□□□□ -0.5
USH1C-207ENST00000527720 FAM181BA6NEQ2 426 aa11.92□□□□□ -0.5
USH1C-207ENST00000527720 NDUFS8O00217 210 aa11.92□□□□□ -0.5
USH1C-207ENST00000527720 EEF1AKMT3Q96AZ1 226 aa11.92□□□□□ -0.5
USH1C-207ENST00000527720 URB1-AS1Q96HZ7 61 aa11.92□□□□□ -0.5
USH1C-207ENST00000527720 C8orf49Q96NF6 230 aa11.92□□□□□ -0.5
USH1C-207ENST00000527720 MOB4Q9Y3A3 225 aa11.92□□□□□ -0.5
USH1C-207ENST00000527720 TMEM8BA6NDV4 472 aa11.91□□□□□ -0.5
USH1C-207ENST00000527720 M0R143 59 aa11.91□□□□□ -0.5
USH1C-207ENST00000527720 CLEC3BP05452 202 aa11.91□□□□□ -0.5
USH1C-207ENST00000527720 PMCHL1Q16048 86 aa11.91□□□□□ -0.5
USH1C-207ENST00000527720 IGHV1-69DA0A0B4J2H0 117 aa11.91□□□□□ -0.5
USH1C-207ENST00000527720 IGHV1-69P01742 117 aa11.91□□□□□ -0.5
USH1C-207ENST00000527720 ARMS2P0C7Q2 107 aa11.91□□□□□ -0.5
USH1C-207ENST00000527720 CTRLP40313 264 aa11.91□□□□□ -0.5
USH1C-207ENST00000527720 CRIP2P52943 208 aaPredicted RBP11.91□□□□□ -0.5
USH1C-207ENST00000527720 ZNF124Q15973 351 aa11.91□□□□□ -0.5
USH1C-207ENST00000527720 PRR25Q96S07 402 aa11.91□□□□□ -0.5
USH1C-207ENST00000527720 BUB3O43684 328 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms