RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 AMN1Q8IY45 258 aa2.9□□□□□ -1.95
CLNS1A-209ENST00000527299 OR5AS1Q8N127 324 aa2.9□□□□□ -1.95
CLNS1A-209ENST00000527299 SLC25A45Q8N413 288 aa2.9□□□□□ -1.95
CLNS1A-209ENST00000527299 MBD3L2Q8NHZ7 208 aaPredicted RBP2.9□□□□□ -1.95
CLNS1A-209ENST00000527299 GATAD1Q8WUU5 269 aa2.9□□□□□ -1.95
CLNS1A-209ENST00000527299 RND1Q92730 232 aa2.9□□□□□ -1.95
CLNS1A-209ENST00000527299 KLK6Q92876 244 aa2.9□□□□□ -1.95
CLNS1A-209ENST00000527299 CHCHD5Q9BSY4 110 aa2.9□□□□□ -1.95
CLNS1A-209ENST00000527299 SLC25A2Q9BXI2 301 aa2.9□□□□□ -1.95
CLNS1A-209ENST00000527299 AGPAT4-IT1Q9H0P7 198 aa2.9□□□□□ -1.95
CLNS1A-209ENST00000527299 KIAA1549LQ6ZVL6 1849 aa2.9□□□□□ -1.95
CLNS1A-209ENST00000527299 GOLGA4Q13439 2230 aaKnown RBP2.89□□□□□ -1.95
CLNS1A-209ENST00000527299 IGLV3-10A0A075B6K4 115 aa2.89□□□□□ -1.95
CLNS1A-209ENST00000527299 TRAV13-1A0A0B4J241 112 aa2.89□□□□□ -1.95
CLNS1A-209ENST00000527299 A0A1B0GVY2 172 aa2.89□□□□□ -1.95
CLNS1A-209ENST00000527299 A0A1B0GXF2 115 aa2.89□□□□□ -1.95
CLNS1A-209ENST00000527299 FAM90A7PA6NKC0 464 aa2.89□□□□□ -1.95
CLNS1A-209ENST00000527299 SH2D7A6NKC9 451 aaPredicted RBP2.89□□□□□ -1.95
CLNS1A-209ENST00000527299 C15orf61A6NNL5 157 aa2.89□□□□□ -1.95
CLNS1A-209ENST00000527299 FAM90A22PA8MWA6 464 aa2.89□□□□□ -1.95
CLNS1A-209ENST00000527299 FAM90A12PA8MX19 464 aa2.89□□□□□ -1.95
CLNS1A-209ENST00000527299 FAM90A23PA8MXZ1 464 aa2.89□□□□□ -1.95
CLNS1A-209ENST00000527299 HSPB6O14558 160 aa2.89□□□□□ -1.95
CLNS1A-209ENST00000527299 CHEK1O14757 476 aa2.89□□□□□ -1.95
CLNS1A-209ENST00000527299 SRSF10O75494 262 aaKnown RBP2.89□□□□□ -1.95
CLNS1A-209ENST00000527299 ZFAND5O76080 213 aa2.89□□□□□ -1.95
CLNS1A-209ENST00000527299 IGKCP01834 107 aa2.89□□□□□ -1.95
CLNS1A-209ENST00000527299 BGLAPP02818 100 aa2.89□□□□□ -1.95
CLNS1A-209ENST00000527299 IL4P05112 153 aa2.89□□□□□ -1.95
CLNS1A-209ENST00000527299 CRYGSP22914 178 aa2.89□□□□□ -1.95
CLNS1A-209ENST00000527299 LOXP28300 417 aaPredicted RBP2.89□□□□□ -1.95
CLNS1A-209ENST00000527299 SSR2P43308 183 aa2.89□□□□□ -1.95
CLNS1A-209ENST00000527299 FBXW4P57775 412 aa2.89□□□□□ -1.95
CLNS1A-209ENST00000527299 SRYQ05066 204 aa2.89□□□□□ -1.95
CLNS1A-209ENST00000527299 FAM27E3Q08E93 113 aa2.89□□□□□ -1.95
CLNS1A-209ENST00000527299 MYO9BQ13459 2157 aa2.89□□□□□ -1.95
CLNS1A-209ENST00000527299 OR1C1Q15619 314 aa2.89□□□□□ -1.95
CLNS1A-209ENST00000527299 RSPO1Q2MKA7 263 aaPredicted RBP2.89□□□□□ -1.95
CLNS1A-209ENST00000527299 SP6Q3SY56 376 aa2.89□□□□□ -1.95
CLNS1A-209ENST00000527299 ZC2HC1BQ5TFG8 222 aa2.89□□□□□ -1.95
CLNS1A-209ENST00000527299 ASPHD1Q5U4P2 390 aa2.89□□□□□ -1.95
CLNS1A-209ENST00000527299 MFSD12Q6NUT3 480 aa2.89□□□□□ -1.95
CLNS1A-209ENST00000527299 KCTD18Q6PI47 426 aaPredicted RBP2.89□□□□□ -1.95
CLNS1A-209ENST00000527299 RNF144BQ7Z419 303 aa2.89□□□□□ -1.95
CLNS1A-209ENST00000527299 ARHGAP5-AS1Q96IT6 56 aa2.89□□□□□ -1.95
CLNS1A-209ENST00000527299 BMFQ96LC9 184 aa2.89□□□□□ -1.95
CLNS1A-209ENST00000527299 C2orf48Q96LS8 159 aa2.89□□□□□ -1.95
CLNS1A-209ENST00000527299 C1orf147Q96MC9 270 aaPredicted RBP2.89□□□□□ -1.95
CLNS1A-209ENST00000527299 FAM173AQ9BQD7 235 aa2.89□□□□□ -1.95
CLNS1A-209ENST00000527299 SHANK2-AS3Q9BTD1 123 aa2.89□□□□□ -1.95
CLNS1A-209ENST00000527299 PDFQ9HBH1 243 aa2.89□□□□□ -1.95
CLNS1A-209ENST00000527299 FGF22Q9HCT0 170 aa2.89□□□□□ -1.95
CLNS1A-209ENST00000527299 ALKBH4Q9NXW9 302 aa2.89□□□□□ -1.95
CLNS1A-209ENST00000527299 PILRAQ9UKJ1 303 aa2.89□□□□□ -1.95
CLNS1A-209ENST00000527299 KLK5Q9Y337 293 aaPredicted RBP2.89□□□□□ -1.95
CLNS1A-209ENST00000527299 LHFPL6Q9Y693 200 aa2.89□□□□□ -1.95
CLNS1A-209ENST00000527299 R4GMQ9 66 aa2.89□□□□□ -1.95
CLNS1A-209ENST00000527299 BPTFQ12830 3046 aa2.89□□□□□ -1.95
CLNS1A-209ENST00000527299 RAI1Q7Z5J4 1906 aaPredicted RBP2.88□□□□□ -1.95
CLNS1A-209ENST00000527299 IGLV3-16A0A075B6K0 115 aa2.88□□□□□ -1.95
CLNS1A-209ENST00000527299 TRBV7-3A0A075B6L6 115 aa2.88□□□□□ -1.95
CLNS1A-209ENST00000527299 TRBV25-1A0A075B6N4 114 aa2.88□□□□□ -1.95
CLNS1A-209ENST00000527299 IGKV6D-21A0A0A0MT36 114 aa2.88□□□□□ -1.95
CLNS1A-209ENST00000527299 TRAV8-1A0A0A6YYK1 113 aa2.88□□□□□ -1.95
CLNS1A-209ENST00000527299 MYMXA0A1B0GTQ4 84 aa2.88□□□□□ -1.95
CLNS1A-209ENST00000527299 LINC01553A4QN01 128 aa2.88□□□□□ -1.95
CLNS1A-209ENST00000527299 TEX22C9J3V5 150 aa2.88□□□□□ -1.95
CLNS1A-209ENST00000527299 M0QZQ0 153 aa2.88□□□□□ -1.95
CLNS1A-209ENST00000527299 ATOX1O00244 68 aa2.88□□□□□ -1.95
CLNS1A-209ENST00000527299 CDX4O14627 284 aaPredicted RBP2.88□□□□□ -1.95
CLNS1A-209ENST00000527299 TIMM23O14925 209 aa2.88□□□□□ -1.95
CLNS1A-209ENST00000527299 SNRNP200O75643 2136 aaKnown RBP2.88□□□□□ -1.95
CLNS1A-209ENST00000527299 CLDN14O95500 239 aa2.88□□□□□ -1.95
CLNS1A-209ENST00000527299 NPYP01303 97 aa2.88□□□□□ -1.95
CLNS1A-209ENST00000527299 APOHP02749 345 aaPredicted RBP2.88□□□□□ -1.95
CLNS1A-209ENST00000527299 P04436 131 aa2.88□□□□□ -1.95
CLNS1A-209ENST00000527299 HMGN2P05204 90 aaKnown RBP2.88□□□□□ -1.95
CLNS1A-209ENST00000527299 COL8A2P25067 703 aa2.88□□□□□ -1.95
CLNS1A-209ENST00000527299 LEPP41159 167 aa2.88□□□□□ -1.95
CLNS1A-209ENST00000527299 CXCL5P42830 114 aa2.88□□□□□ -1.95
CLNS1A-209ENST00000527299 LOXL1Q08397 574 aaPredicted RBP2.88□□□□□ -1.95
CLNS1A-209ENST00000527299 CST6Q15828 149 aa2.88□□□□□ -1.95
CLNS1A-209ENST00000527299 DEFB121Q5J5C9 76 aa2.88□□□□□ -1.95
CLNS1A-209ENST00000527299 HES3Q5TGS1 186 aa2.88□□□□□ -1.95
CLNS1A-209ENST00000527299 GDF5OSQ5U4N7 250 aa2.88□□□□□ -1.95
CLNS1A-209ENST00000527299 DGAT2L6Q6ZPD8 337 aa2.88□□□□□ -1.95
CLNS1A-209ENST00000527299 DEFB132Q7Z7B7 95 aa2.88□□□□□ -1.95
CLNS1A-209ENST00000527299 PCP2Q8IVA1 136 aa2.88□□□□□ -1.95
CLNS1A-209ENST00000527299 RAB42Q8N4Z0 105 aa2.88□□□□□ -1.95
CLNS1A-209ENST00000527299 C11orf44Q8N8P7 122 aa2.88□□□□□ -1.95
CLNS1A-209ENST00000527299 PRR26Q8N8Z3 221 aa2.88□□□□□ -1.95
CLNS1A-209ENST00000527299 ZNF441Q8N8Z8 693 aa2.88□□□□□ -1.95
CLNS1A-209ENST00000527299 RFESDQ8TAC1 157 aa2.88□□□□□ -1.95
CLNS1A-209ENST00000527299 FAM19A4Q96LR4 140 aa2.88□□□□□ -1.95
CLNS1A-209ENST00000527299 MRPL20Q9BYC9 149 aaKnown RBP2.88□□□□□ -1.95
CLNS1A-209ENST00000527299 RETNQ9HD89 108 aa2.88□□□□□ -1.95
CLNS1A-209ENST00000527299 PSENENQ9NZ42 101 aa2.88□□□□□ -1.95
CLNS1A-209ENST00000527299 C19orf25Q9UFG5 118 aaPredicted RBP2.88□□□□□ -1.95
CLNS1A-209ENST00000527299 COL16A1Q07092 1604 aaPredicted RBP2.88□□□□□ -1.95
CLNS1A-209ENST00000527299 COL4A2P08572 1712 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms