RNA–Protein interactions for RNA: ENST00000526313.5

USH1C-204, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best)

Gene USH1C, Length 2,149 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-204ENST00000526313 TP53TG3Q9ULZ0 132 aa12.35□□□□□ -0.43
USH1C-204ENST00000526313 SPINK4O60575 86 aa12.34□□□□□ -0.43
USH1C-204ENST00000526313 IGHG2P01859 326 aa12.34□□□□□ -0.43
USH1C-204ENST00000526313 SLC35B1P78383 322 aa12.34□□□□□ -0.43
USH1C-204ENST00000526313 Q0VG73 95 aa12.34□□□□□ -0.43
USH1C-204ENST00000526313 PSG3Q16557 428 aa12.34□□□□□ -0.43
USH1C-204ENST00000526313 NEU1Q99519 415 aa12.34□□□□□ -0.43
USH1C-204ENST00000526313 CLPSL1A2RUU4 121 aa12.34□□□□□ -0.43
USH1C-204ENST00000526313 FAM223BA6NKX1 122 aa12.34□□□□□ -0.43
USH1C-204ENST00000526313 HLA-DQA1P01909 254 aa12.34□□□□□ -0.43
USH1C-204ENST00000526313 ESDP10768 282 aa12.34□□□□□ -0.43
USH1C-204ENST00000526313 RAB9AP51151 201 aa12.34□□□□□ -0.43
USH1C-204ENST00000526313 FAM223AQ8IWN6 122 aa12.34□□□□□ -0.43
USH1C-204ENST00000526313 CRYBG3Q68DQ2 2970 aa12.34□□□□□ -0.43
USH1C-204ENST00000526313 CELSR2Q9HCU4 2923 aa12.33□□□□□ -0.43
USH1C-204ENST00000526313 SERTM2A0A1B0GWG4 89 aa12.33□□□□□ -0.44
USH1C-204ENST00000526313 FAM231BA6NCW3 169 aa12.33□□□□□ -0.44
USH1C-204ENST00000526313 H3BUX3 64 aa12.33□□□□□ -0.44
USH1C-204ENST00000526313 K7EQM0 130 aa12.33□□□□□ -0.44
USH1C-204ENST00000526313 M0QZK8 103 aa12.33□□□□□ -0.44
USH1C-204ENST00000526313 ATP5G2Q06055 141 aa12.33□□□□□ -0.44
USH1C-204ENST00000526313 MRPL54Q6P161 138 aaKnown RBP12.33□□□□□ -0.44
USH1C-204ENST00000526313 CLEC19AQ6UXS0 136 aa12.33□□□□□ -0.44
USH1C-204ENST00000526313 PRNTQ86SH4 94 aa12.33□□□□□ -0.44
USH1C-204ENST00000526313 TMEM256Q8N2U0 113 aa12.33□□□□□ -0.44
USH1C-204ENST00000526313 CIARTQ8N365 385 aaPredicted RBP12.33□□□□□ -0.44
USH1C-204ENST00000526313 LINC01356Q8N9X3 169 aa12.33□□□□□ -0.44
USH1C-204ENST00000526313 MS4A10Q96PG2 267 aa12.33□□□□□ -0.44
USH1C-204ENST00000526313 GFRA4Q9GZZ7 299 aa12.33□□□□□ -0.44
USH1C-204ENST00000526313 AAMDCQ9H7C9 122 aa12.33□□□□□ -0.44
USH1C-204ENST00000526313 PSG8Q9UQ74 426 aa12.33□□□□□ -0.44
USH1C-204ENST00000526313 HIGD1CA8MV81 97 aa12.32□□□□□ -0.44
USH1C-204ENST00000526313 A8MWL6 223 aa12.32□□□□□ -0.44
USH1C-204ENST00000526313 M0R3E3 92 aa12.32□□□□□ -0.44
USH1C-204ENST00000526313 BUB3O43684 328 aa12.32□□□□□ -0.44
USH1C-204ENST00000526313 P01737 135 aa12.32□□□□□ -0.44
USH1C-204ENST00000526313 CRISP2P16562 243 aa12.32□□□□□ -0.44
USH1C-204ENST00000526313 PPIFP30405 207 aaKnown RBP12.32□□□□□ -0.44
USH1C-204ENST00000526313 ATP5L2Q7Z4Y8 100 aa12.32□□□□□ -0.44
USH1C-204ENST00000526313 TMEM18Q96B42 140 aa12.32□□□□□ -0.44
USH1C-204ENST00000526313 ZNF331Q9NQX6 463 aaPredicted RBP12.32□□□□□ -0.44
USH1C-204ENST00000526313 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.32□□□□□ -0.44
USH1C-204ENST00000526313 A0A1B0GUS0 222 aa12.32□□□□□ -0.44
USH1C-204ENST00000526313 A0A1B0GXF2 115 aa12.32□□□□□ -0.44
USH1C-204ENST00000526313 NUPR1O60356 82 aa12.32□□□□□ -0.44
USH1C-204ENST00000526313 LINC00310P59036 64 aa12.32□□□□□ -0.44
USH1C-204ENST00000526313 JOSD1Q15040 202 aaPredicted RBP12.32□□□□□ -0.44
USH1C-204ENST00000526313 OR4B1Q8NGF8 309 aa12.32□□□□□ -0.44
USH1C-204ENST00000526313 FBN2P35556 2912 aa12.32□□□□□ -0.44
USH1C-204ENST00000526313 A0A087X0K7 114 aa12.31□□□□□ -0.44
USH1C-204ENST00000526313 GRIFINA4D1Z8 144 aa12.31□□□□□ -0.44
USH1C-204ENST00000526313 IGHG4P01861 327 aa12.31□□□□□ -0.44
USH1C-204ENST00000526313 GDF5OSQ5U4N7 250 aa12.31□□□□□ -0.44
USH1C-204ENST00000526313 Q71RC1 249 aaPredicted RBP12.31□□□□□ -0.44
USH1C-204ENST00000526313 COX8CQ7Z4L0 72 aa12.31□□□□□ -0.44
USH1C-204ENST00000526313 GTSF1Q8WW33 167 aa12.31□□□□□ -0.44
USH1C-204ENST00000526313 U3KQE9 123 aa12.31□□□□□ -0.44
USH1C-204ENST00000526313 ZFHX3Q15911 3703 aa12.31□□□□□ -0.44
USH1C-204ENST00000526313 IGHV3-35A0A0C4DH35 117 aa12.31□□□□□ -0.44
USH1C-204ENST00000526313 H3BUA1 57 aa12.31□□□□□ -0.44
USH1C-204ENST00000526313 J3QLI3 93 aa12.31□□□□□ -0.44
USH1C-204ENST00000526313 LY6EQ16553 131 aa12.31□□□□□ -0.44
USH1C-204ENST00000526313 CDPF1Q6NVV7 123 aa12.31□□□□□ -0.44
USH1C-204ENST00000526313 DAZAP1Q96EP5 407 aaKnown RBP12.31□□□□□ -0.44
USH1C-204ENST00000526313 ZC2HC1AQ96GY0 325 aa12.31□□□□□ -0.44
USH1C-204ENST00000526313 CELSR1Q9NYQ6 3014 aa12.3□□□□□ -0.44
USH1C-204ENST00000526313 FOXA3P55318 350 aaPredicted RBP12.3□□□□□ -0.44
USH1C-204ENST00000526313 RELQ04864 619 aaPredicted RBP12.3□□□□□ -0.44
USH1C-204ENST00000526313 C1orf194Q5T5A4 169 aa12.3□□□□□ -0.44
USH1C-204ENST00000526313 LRRK2Q5S007 2527 aa12.29□□□□□ -0.44
USH1C-204ENST00000526313 A1L4Q6 167 aa12.29□□□□□ -0.44
USH1C-204ENST00000526313 FBLL1A6NHQ2 334 aaKnown RBP12.29□□□□□ -0.44
USH1C-204ENST00000526313 CSN1S1P47710 185 aa12.29□□□□□ -0.44
USH1C-204ENST00000526313 LOXL1Q08397 574 aaPredicted RBP12.29□□□□□ -0.44
USH1C-204ENST00000526313 LINC00527Q9UJ94 153 aa12.29□□□□□ -0.44
USH1C-204ENST00000526313 FAM208BQ5VWN6 2430 aa12.29□□□□□ -0.44
USH1C-204ENST00000526313 COL8A1P27658 744 aa12.29□□□□□ -0.44
USH1C-204ENST00000526313 CRIP1P50238 77 aa12.29□□□□□ -0.44
USH1C-204ENST00000526313 OR10J3Q5JRS4 329 aa12.29□□□□□ -0.44
USH1C-204ENST00000526313 FAM209BQ5JX69 171 aa12.29□□□□□ -0.44
USH1C-204ENST00000526313 TCF24Q7RTU0 167 aa12.29□□□□□ -0.44
USH1C-204ENST00000526313 NOL4LQ96MY1 436 aaPredicted RBP12.29□□□□□ -0.44
USH1C-204ENST00000526313 ZNF580Q9UK33 172 aa12.29□□□□□ -0.44
USH1C-204ENST00000526313 IGHV3OR16-8A0A075B7F1 116 aa12.28□□□□□ -0.44
USH1C-204ENST00000526313 APCSP02743 223 aa12.28□□□□□ -0.44
USH1C-204ENST00000526313 TRGV3P03979 118 aa12.28□□□□□ -0.44
USH1C-204ENST00000526313 RAB4BP61018 213 aa12.28□□□□□ -0.44
USH1C-204ENST00000526313 BLCAPP62952 87 aa12.28□□□□□ -0.44
USH1C-204ENST00000526313 SLAQ13239 276 aa12.28□□□□□ -0.44
USH1C-204ENST00000526313 C9orf152Q5JTZ5 239 aa12.28□□□□□ -0.44
USH1C-204ENST00000526313 OR5R1Q8NH85 324 aa12.28□□□□□ -0.44
USH1C-204ENST00000526313 GNB4Q9HAV0 340 aa12.28□□□□□ -0.44
USH1C-204ENST00000526313 GZMBP10144 247 aa12.28□□□□□ -0.44
USH1C-204ENST00000526313 RBPMS2Q6ZRY4 209 aaKnown RBP12.28□□□□□ -0.44
USH1C-204ENST00000526313 USMG5Q96IX5 58 aa12.28□□□□□ -0.44
USH1C-204ENST00000526313 CHEK1O14757 476 aa12.27□□□□□ -0.45
USH1C-204ENST00000526313 KRTAP10-9P60411 292 aa12.27□□□□□ -0.45
USH1C-204ENST00000526313 PAFAH1B2P68402 229 aa12.27□□□□□ -0.45
USH1C-204ENST00000526313 KIAA1644Q3SXP7 199 aa12.27□□□□□ -0.45
USH1C-204ENST00000526313 PRDM13Q9H4Q3 707 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms