RNA–Protein interactions for RNA: ENST00000526204.5

VPS28-205, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 5

Gene VPS28, Length 2,120 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-205ENST00000526204 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.67■□□□□ 0.26
VPS28-205ENST00000526204 RIGQ13278 110 aa16.67■□□□□ 0.26
VPS28-205ENST00000526204 Q6AWC8 147 aa16.67■□□□□ 0.26
VPS28-205ENST00000526204 SH2D7A6NKC9 451 aaPredicted RBP16.67■□□□□ 0.26
VPS28-205ENST00000526204 FBLN7Q53RD9 439 aa16.67■□□□□ 0.26
VPS28-205ENST00000526204 S4R3C0 116 aa16.67■□□□□ 0.26
VPS28-205ENST00000526204 F8W735 103 aaPredicted RBP16.66■□□□□ 0.26
VPS28-205ENST00000526204 CSN1S1P47710 185 aa16.66■□□□□ 0.26
VPS28-205ENST00000526204 LCN12Q6JVE5 192 aa16.66■□□□□ 0.26
VPS28-205ENST00000526204 TMEM70Q9BUB7 260 aa16.66■□□□□ 0.26
VPS28-205ENST00000526204 ABCA1O95477 2261 aa16.66■□□□□ 0.26
VPS28-205ENST00000526204 LINC00614P0C842 121 aa16.66■□□□□ 0.26
VPS28-205ENST00000526204 PSG9Q00887 426 aa16.66■□□□□ 0.26
VPS28-205ENST00000526204 ARL6IP6Q8N6S5 226 aa16.66■□□□□ 0.26
VPS28-205ENST00000526204 TXN2Q99757 166 aa16.66■□□□□ 0.26
VPS28-205ENST00000526204 TPRP12270 2363 aaKnown RBP16.65■□□□□ 0.26
VPS28-205ENST00000526204 TRAV9-2A0A087WT02 112 aa16.65■□□□□ 0.26
VPS28-205ENST00000526204 CT45A10P0DMU9 189 aa16.65■□□□□ 0.26
VPS28-205ENST00000526204 NDPQ00604 133 aa16.65■□□□□ 0.26
VPS28-205ENST00000526204 DYNAPQ8N1N2 210 aa16.65■□□□□ 0.26
VPS28-205ENST00000526204 OVOL3O00110 214 aa16.64■□□□□ 0.25
VPS28-205ENST00000526204 TMEM11P17152 192 aa16.64■□□□□ 0.25
VPS28-205ENST00000526204 GATD1Q8NB37 220 aa16.64■□□□□ 0.25
VPS28-205ENST00000526204 C1RLQ9NZP8 487 aa16.64■□□□□ 0.25
VPS28-205ENST00000526204 CRXO43186 299 aaPredicted RBP16.64■□□□□ 0.25
VPS28-205ENST00000526204 OR5AL1P0C617 328 aa16.64■□□□□ 0.25
VPS28-205ENST00000526204 RPL7P18124 248 aaKnown RBP16.64■□□□□ 0.25
VPS28-205ENST00000526204 Q6ZN92 141 aa16.64■□□□□ 0.25
VPS28-205ENST00000526204 M0R3E3 92 aa16.63■□□□□ 0.25
VPS28-205ENST00000526204 S100A7P31151 101 aa16.63■□□□□ 0.25
VPS28-205ENST00000526204 PRR31Q5SQ13 230 aa16.63■□□□□ 0.25
VPS28-205ENST00000526204 Q71RC1 249 aaPredicted RBP16.63■□□□□ 0.25
VPS28-205ENST00000526204 ATOH7Q8N100 152 aa16.63■□□□□ 0.25
VPS28-205ENST00000526204 IGHV1-24A0A0C4DH33 117 aa16.63■□□□□ 0.25
VPS28-205ENST00000526204 NDUFB8O95169 186 aa16.63■□□□□ 0.25
VPS28-205ENST00000526204 ZFP36P26651 326 aaKnown RBP16.63■□□□□ 0.25
VPS28-205ENST00000526204 HNRNPA3P51991 378 aaKnown RBP16.63■□□□□ 0.25
VPS28-205ENST00000526204 COL5A1-AS1Q5SY13 56 aa16.63■□□□□ 0.25
VPS28-205ENST00000526204 FAM120AOSQ5T036 256 aa16.63■□□□□ 0.25
VPS28-205ENST00000526204 BCL6BQ8N143 479 aaPredicted RBP16.63■□□□□ 0.25
VPS28-205ENST00000526204 ABCA4P78363 2273 aa16.62■□□□□ 0.25
VPS28-205ENST00000526204 FBLL1A6NHQ2 334 aaKnown RBP16.62■□□□□ 0.25
VPS28-205ENST00000526204 FAM106CPP0CH98 169 aa16.62■□□□□ 0.25
VPS28-205ENST00000526204 CRIP1P50238 77 aa16.62■□□□□ 0.25
VPS28-205ENST00000526204 SPTA1P02549 2419 aa16.62■□□□□ 0.25
VPS28-205ENST00000526204 LEPROTL1O95214 131 aa16.61■□□□□ 0.25
VPS28-205ENST00000526204 ARMS2P0C7Q2 107 aa16.61■□□□□ 0.25
VPS28-205ENST00000526204 BATFQ16520 125 aa16.61■□□□□ 0.25
VPS28-205ENST00000526204 SIRPDQ9H106 197 aa16.61■□□□□ 0.25
VPS28-205ENST00000526204 CLEC5AQ9NY25 188 aa16.61■□□□□ 0.25
VPS28-205ENST00000526204 M0QZ24 198 aa16.61■□□□□ 0.25
VPS28-205ENST00000526204 IGHV7-81A0A0B4J1V7 117 aa16.6■□□□□ 0.25
VPS28-205ENST00000526204 OR2T8A6NH00 312 aa16.6■□□□□ 0.25
VPS28-205ENST00000526204 CTSGP08311 255 aa16.6■□□□□ 0.25
VPS28-205ENST00000526204 EGR2P11161 476 aaPredicted RBP16.6■□□□□ 0.25
VPS28-205ENST00000526204 ZNF25P17030 456 aaPredicted RBP16.6■□□□□ 0.25
VPS28-205ENST00000526204 COX8CQ7Z4L0 72 aa16.6■□□□□ 0.25
VPS28-205ENST00000526204 RABAC1Q9UI14 185 aa16.6■□□□□ 0.25
VPS28-205ENST00000526204 SAPCD1Q5SSQ6 148 aa16.6■□□□□ 0.25
VPS28-205ENST00000526204 Q8N9W7 124 aa16.59■□□□□ 0.25
VPS28-205ENST00000526204 LAMTOR2Q9Y2Q5 125 aa16.59■□□□□ 0.25
VPS28-205ENST00000526204 MRPS16Q9Y3D3 137 aaKnown RBP16.59■□□□□ 0.25
VPS28-205ENST00000526204 SYS1-DBNDD2H3BUS1 97 aa16.58■□□□□ 0.25
VPS28-205ENST00000526204 G0S2P27469 103 aa16.58■□□□□ 0.25
VPS28-205ENST00000526204 UBE2E1P51965 193 aa16.58■□□□□ 0.25
VPS28-205ENST00000526204 MAJINQ3KP22 176 aa16.58■□□□□ 0.25
VPS28-205ENST00000526204 C8orf49Q96NF6 230 aa16.58■□□□□ 0.25
VPS28-205ENST00000526204 LPAR2Q9HBW0 351 aa16.58■□□□□ 0.25
VPS28-205ENST00000526204 IGHV3-23P01764 117 aa16.58■□□□□ 0.24
VPS28-205ENST00000526204 ASCL2Q99929 193 aa16.58■□□□□ 0.24
VPS28-205ENST00000526204 IGHV2-70DA0A0C4DH43 119 aa16.57■□□□□ 0.24
VPS28-205ENST00000526204 TSPOP30536 169 aa16.57■□□□□ 0.24
VPS28-205ENST00000526204 ZNF493Q6ZR52 646 aa16.57■□□□□ 0.24
VPS28-205ENST00000526204 ARHGAP32A7KAX9 2087 aa16.57■□□□□ 0.24
VPS28-205ENST00000526204 LRBAP50851 2863 aa16.57■□□□□ 0.24
VPS28-205ENST00000526204 TMEM189A5PLL7 270 aa16.57■□□□□ 0.24
VPS28-205ENST00000526204 IGLL1P15814 213 aa16.57■□□□□ 0.24
VPS28-205ENST00000526204 HSPB8Q9UJY1 196 aa16.57■□□□□ 0.24
VPS28-205ENST00000526204 OR4C46A6NHA9 309 aa16.56■□□□□ 0.24
VPS28-205ENST00000526204 GAGE1Q13065 139 aa16.56■□□□□ 0.24
VPS28-205ENST00000526204 SPATA12Q7Z6I5 190 aa16.56■□□□□ 0.24
VPS28-205ENST00000526204 FAM110DQ8TAY7 271 aaPredicted RBP16.56■□□□□ 0.24
VPS28-205ENST00000526204 EFNA4P52798 201 aa16.55■□□□□ 0.24
VPS28-205ENST00000526204 KLK9Q2XQG4 91 aa16.55■□□□□ 0.24
VPS28-205ENST00000526204 TMEM208Q9BTX3 173 aa16.55■□□□□ 0.24
VPS28-205ENST00000526204 TPPP3Q9BW30 176 aa16.55■□□□□ 0.24
VPS28-205ENST00000526204 MAP1LC3CQ9BXW4 147 aa16.55■□□□□ 0.24
VPS28-205ENST00000526204 KLK9Q9UKQ9 250 aa16.55■□□□□ 0.24
VPS28-205ENST00000526204 RELNP78509 3460 aa16.55■□□□□ 0.24
VPS28-205ENST00000526204 TACC2O95359 2948 aa16.55■□□□□ 0.24
VPS28-205ENST00000526204 A0A1W2PPR1 153 aa16.55■□□□□ 0.24
VPS28-205ENST00000526204 SH2D1AO60880 128 aa16.55■□□□□ 0.24
VPS28-205ENST00000526204 PRR25Q96S07 402 aa16.55■□□□□ 0.24
VPS28-205ENST00000526204 CHD8Q9HCK8 2581 aa16.55■□□□□ 0.24
VPS28-205ENST00000526204 RAB9AP51151 201 aa16.54■□□□□ 0.24
VPS28-205ENST00000526204 RELQ04864 619 aaPredicted RBP16.54■□□□□ 0.24
VPS28-205ENST00000526204 PET117Q6UWS5 81 aa16.54■□□□□ 0.24
VPS28-205ENST00000526204 TMUB1Q9BVT8 246 aa16.54■□□□□ 0.24
VPS28-205ENST00000526204 TMEM191AQ9H0A3 160 aa16.54■□□□□ 0.24
VPS28-205ENST00000526204 ST20Q9HBF5 79 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms