RNA–Protein interactions for RNA: ENST00000525367.1

USP47-206, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 434 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-206ENST00000525367 M0R233 179 aa2.54□□□□□ -2
USP47-206ENST00000525367 TCRAP04437 139 aa2.54□□□□□ -2
USP47-206ENST00000525367 TSPAN19P0C672 248 aa2.54□□□□□ -2
USP47-206ENST00000525367 ASAH2BP0C7U1 165 aa2.54□□□□□ -2
USP47-206ENST00000525367 FABP4P15090 132 aa2.54□□□□□ -2
USP47-206ENST00000525367 RPS25P62851 125 aaKnown RBP2.54□□□□□ -2
USP47-206ENST00000525367 QRFPP83859 136 aa2.54□□□□□ -2
USP47-206ENST00000525367 ZNF181Q2M3W8 571 aa2.54□□□□□ -2
USP47-206ENST00000525367 CTAGE3PQ8IX95 158 aa2.54□□□□□ -2
USP47-206ENST00000525367 LYPD1Q8N2G4 141 aa2.54□□□□□ -2
USP47-206ENST00000525367 TMEM254Q8TBM7 123 aa2.54□□□□□ -2
USP47-206ENST00000525367 HYLS1Q96M11 299 aa2.54□□□□□ -2
USP47-206ENST00000525367 TIMM21Q9BVV7 248 aa2.54□□□□□ -2
USP47-206ENST00000525367 LPAR5Q9H1C0 372 aa2.54□□□□□ -2
USP47-206ENST00000525367 TAF9BQ9HBM6 251 aa2.54□□□□□ -2
USP47-206ENST00000525367 GPR179Q6PRD1 2367 aa2.54□□□□□ -2
USP47-206ENST00000525367 SCN9AQ15858 1988 aa2.54□□□□□ -2
USP47-206ENST00000525367 WDR90Q96KV7 1748 aa2.54□□□□□ -2
USP47-206ENST00000525367 A0A0G2JQZ4 141 aa2.53□□□□□ -2
USP47-206ENST00000525367 A0A1B0GV90 55 aa2.53□□□□□ -2
USP47-206ENST00000525367 HBDP02042 147 aa2.53□□□□□ -2
USP47-206ENST00000525367 GPX1P07203 203 aa2.53□□□□□ -2
USP47-206ENST00000525367 SSR2P43308 183 aa2.53□□□□□ -2
USP47-206ENST00000525367 COPZ1P61923 177 aa2.53□□□□□ -2
USP47-206ENST00000525367 RRAS2P62070 204 aaPredicted RBP2.53□□□□□ -2
USP47-206ENST00000525367 ELOBQ15370 118 aa2.53□□□□□ -2
USP47-206ENST00000525367 HAGHLQ6PII5 290 aaPredicted RBP2.53□□□□□ -2
USP47-206ENST00000525367 OR5D14Q8NGL3 314 aa2.53□□□□□ -2
USP47-206ENST00000525367 ARL11Q969Q4 196 aa2.53□□□□□ -2
USP47-206ENST00000525367 NIT2Q9NQR4 276 aa2.53□□□□□ -2
USP47-206ENST00000525367 PIK3C2AO00443 1686 aa2.53□□□□□ -2
USP47-206ENST00000525367 GREB1Q4ZG55 1949 aa2.52□□□□□ -2.01
USP47-206ENST00000525367 KIAA1107Q9UPP5 1409 aa2.52□□□□□ -2.01
USP47-206ENST00000525367 hDV103S1A0JD37 113 aa2.52□□□□□ -2.01
USP47-206ENST00000525367 NCR2O95944 276 aa2.52□□□□□ -2.01
USP47-206ENST00000525367 APOC1P02654 83 aa2.52□□□□□ -2.01
USP47-206ENST00000525367 SLC25A5P05141 298 aaKnown RBP2.52□□□□□ -2.01
USP47-206ENST00000525367 IGLC6P0CF74 106 aa2.52□□□□□ -2.01
USP47-206ENST00000525367 SAA1P0DJI8 122 aaPredicted RBP2.52□□□□□ -2.01
USP47-206ENST00000525367 HIST1H1BP16401 226 aaKnown RBP2.52□□□□□ -2.01
USP47-206ENST00000525367 S100A1P23297 94 aa2.52□□□□□ -2.01
USP47-206ENST00000525367 KDELR1P24390 212 aa2.52□□□□□ -2.01
USP47-206ENST00000525367 ROMO1P60602 79 aa2.52□□□□□ -2.01
USP47-206ENST00000525367 CDK6Q00534 326 aa2.52□□□□□ -2.01
USP47-206ENST00000525367 ZNF846Q147U1 533 aa2.52□□□□□ -2.01
USP47-206ENST00000525367 OR4C12Q96R67 309 aa2.52□□□□□ -2.01
USP47-206ENST00000525367 TNFSF18Q9UNG2 199 aa2.52□□□□□ -2.01
USP47-206ENST00000525367 NUP210Q8TEM1 1887 aaPredicted RBP2.52□□□□□ -2.01
USP47-206ENST00000525367 TCOF1Q13428 1488 aaKnown RBP2.52□□□□□ -2.01
USP47-206ENST00000525367 RTEL1-TNFRSF6BF6WH68 1400 aa2.51□□□□□ -2.01
USP47-206ENST00000525367 TRGV4A0A0C4DH28 118 aa2.51□□□□□ -2.01
USP47-206ENST00000525367 LOC107986453A0A1B0GWG9 222 aa2.51□□□□□ -2.01
USP47-206ENST00000525367 FAM92AA1XBS5 289 aa2.51□□□□□ -2.01
USP47-206ENST00000525367 CRPP02741 224 aa2.51□□□□□ -2.01
USP47-206ENST00000525367 P0C880 135 aa2.51□□□□□ -2.01
USP47-206ENST00000525367 HLA-DRB4P13762 266 aa2.51□□□□□ -2.01
USP47-206ENST00000525367 AKR1D1P51857 326 aa2.51□□□□□ -2.01
USP47-206ENST00000525367 CIRBPQ14011 172 aaKnown RBP2.51□□□□□ -2.01
USP47-206ENST00000525367 WHAMMP3Q1A5X7 153 aa2.51□□□□□ -2.01
USP47-206ENST00000525367 HCP5Q6MZN7 132 aa2.51□□□□□ -2.01
USP47-206ENST00000525367 LINC00311Q8N616 119 aa2.51□□□□□ -2.01
USP47-206ENST00000525367 C9orf163Q8N9P6 203 aa2.51□□□□□ -2.01
USP47-206ENST00000525367 OR4C6Q8NH72 309 aa2.51□□□□□ -2.01
USP47-206ENST00000525367 MUCL1Q96DR8 90 aa2.51□□□□□ -2.01
USP47-206ENST00000525367 C2orf88Q9BSF0 95 aa2.51□□□□□ -2.01
USP47-206ENST00000525367 LINC00470Q9BZP3 86 aa2.51□□□□□ -2.01
USP47-206ENST00000525367 HLA-DRB4X5D2U9 266 aa2.51□□□□□ -2.01
USP47-206ENST00000525367 BICRAQ9NZM4 1560 aa2.51□□□□□ -2.01
USP47-206ENST00000525367 DLC1Q96QB1 1528 aa2.51□□□□□ -2.01
USP47-206ENST00000525367 COL1A2P08123 1366 aa2.5□□□□□ -2.01
USP47-206ENST00000525367 TRAV27A0A087WT01 109 aa2.5□□□□□ -2.01
USP47-206ENST00000525367 ZNF727A8MUV8 499 aa2.5□□□□□ -2.01
USP47-206ENST00000525367 H3BRN7 92 aa2.5□□□□□ -2.01
USP47-206ENST00000525367 DLEU1O43261 78 aa2.5□□□□□ -2.01
USP47-206ENST00000525367 ZNF737O75373 536 aa2.5□□□□□ -2.01
USP47-206ENST00000525367 LINC00694P0DN24 101 aa2.5□□□□□ -2.01
USP47-206ENST00000525367 NEDD8Q15843 81 aa2.5□□□□□ -2.01
USP47-206ENST00000525367 LCE1CQ5T751 118 aa2.5□□□□□ -2.01
USP47-206ENST00000525367 LCE1BQ5T7P3 118 aa2.5□□□□□ -2.01
USP47-206ENST00000525367 Q8N814 137 aa2.5□□□□□ -2.01
USP47-206ENST00000525367 OR10AC1Q8NH08 325 aa2.5□□□□□ -2.01
USP47-206ENST00000525367 CCL4L1Q8NHW4 92 aa2.5□□□□□ -2.01
USP47-206ENST00000525367 SFT2D1Q8WV19 159 aa2.5□□□□□ -2.01
USP47-206ENST00000525367 RAB37Q96AX2 223 aa2.5□□□□□ -2.01
USP47-206ENST00000525367 ARHGEF11O15085 1522 aa2.5□□□□□ -2.01
USP47-206ENST00000525367 NISCHQ9Y2I1 1504 aa2.5□□□□□ -2.01
USP47-206ENST00000525367 MYO16Q9Y6X6 1858 aa2.5□□□□□ -2.01
USP47-206ENST00000525367 XIRP1Q702N8 1843 aaKnown RBP2.49□□□□□ -2.01
USP47-206ENST00000525367 MALRD1Q5VYJ5 2156 aa2.49□□□□□ -2.01
USP47-206ENST00000525367 MYH7BA7E2Y1 1941 aa2.49□□□□□ -2.01
USP47-206ENST00000525367 IGKV2D-26A0A0A0MRZ7 120 aa2.49□□□□□ -2.01
USP47-206ENST00000525367 IGKV3D-11A0A0A0MRZ8 115 aa2.49□□□□□ -2.01
USP47-206ENST00000525367 TRAV12-1A0A0B4J245 112 aa2.49□□□□□ -2.01
USP47-206ENST00000525367 LINC00587B1AMM8 73 aa2.49□□□□□ -2.01
USP47-206ENST00000525367 FAM25AB3EWG3 89 aa2.49□□□□□ -2.01
USP47-206ENST00000525367 FAM25CB3EWG5 89 aa2.49□□□□□ -2.01
USP47-206ENST00000525367 FAM25GB3EWG6 89 aa2.49□□□□□ -2.01
USP47-206ENST00000525367 NPFFO15130 113 aa2.49□□□□□ -2.01
USP47-206ENST00000525367 IGLV1-51P01701 117 aa2.49□□□□□ -2.01
USP47-206ENST00000525367 TRACP01848 142 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms