RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 ADAT1Q9BUB4 502 aaKnown RBP2.09□□□□□ -2.07
VPS13B-207ENST00000518569 MRPL32Q9BYC8 188 aaKnown RBP2.09□□□□□ -2.07
VPS13B-207ENST00000518569 TMEM133Q9H2Q1 129 aa2.09□□□□□ -2.07
VPS13B-207ENST00000518569 BANF2Q9H503 90 aa2.09□□□□□ -2.07
VPS13B-207ENST00000518569 CBLN4Q9NTU7 201 aa2.09□□□□□ -2.07
VPS13B-207ENST00000518569 ZNRD1Q9P1U0 126 aa2.09□□□□□ -2.07
VPS13B-207ENST00000518569 ZNF222Q9UK12 451 aa2.09□□□□□ -2.07
VPS13B-207ENST00000518569 PSME4Q14997 1843 aa2.09□□□□□ -2.08
VPS13B-207ENST00000518569 PIEZO1Q92508 2521 aa2.09□□□□□ -2.08
VPS13B-207ENST00000518569 SCN9AQ15858 1988 aa2.09□□□□□ -2.08
VPS13B-207ENST00000518569 DOCK3Q8IZD9 2030 aa2.08□□□□□ -2.08
VPS13B-207ENST00000518569 UBR2Q8IWV8 1755 aa2.08□□□□□ -2.08
VPS13B-207ENST00000518569 ZDBF2Q9HCK1 2354 aa2.08□□□□□ -2.08
VPS13B-207ENST00000518569 C5orf42Q9H799 3197 aa2.08□□□□□ -2.08
VPS13B-207ENST00000518569 IGHV1-45A0A0A0MS14 117 aa2.08□□□□□ -2.08
VPS13B-207ENST00000518569 TRAV13-1A0A0B4J241 112 aa2.08□□□□□ -2.08
VPS13B-207ENST00000518569 IGKV1-8A0A0C4DH67 115 aa2.08□□□□□ -2.08
VPS13B-207ENST00000518569 LOC107984640A0A0U1RRK4 108 aa2.08□□□□□ -2.08
VPS13B-207ENST00000518569 C7orf71A4D174 169 aa2.08□□□□□ -2.08
VPS13B-207ENST00000518569 OR51F1A6NGY5 319 aa2.08□□□□□ -2.08
VPS13B-207ENST00000518569 TAX1BP3O14907 124 aa2.08□□□□□ -2.08
VPS13B-207ENST00000518569 YPEL1O60688 119 aa2.08□□□□□ -2.08
VPS13B-207ENST00000518569 MT-ND4LP03901 98 aa2.08□□□□□ -2.08
VPS13B-207ENST00000518569 CD14P08571 375 aa2.08□□□□□ -2.08
VPS13B-207ENST00000518569 FKBP2P26885 142 aaKnown RBP2.08□□□□□ -2.08
VPS13B-207ENST00000518569 RPL22P35268 128 aaKnown RBP2.08□□□□□ -2.08
VPS13B-207ENST00000518569 TGFBR1P36897 503 aa2.08□□□□□ -2.08
VPS13B-207ENST00000518569 TAS2R45P59539 299 aa2.08□□□□□ -2.08
VPS13B-207ENST00000518569 UBA52P62987 128 aaKnown RBP2.08□□□□□ -2.08
VPS13B-207ENST00000518569 UBE2BP63146 152 aa2.08□□□□□ -2.08
VPS13B-207ENST00000518569 AKR1C1Q04828 323 aa2.08□□□□□ -2.08
VPS13B-207ENST00000518569 ATP5G2Q06055 141 aa2.08□□□□□ -2.08
VPS13B-207ENST00000518569 CLLU1Q5K131 121 aa2.08□□□□□ -2.08
VPS13B-207ENST00000518569 MRPL2Q5T653 305 aaKnown RBP2.08□□□□□ -2.08
VPS13B-207ENST00000518569 LINC01545Q5VT33 79 aa2.08□□□□□ -2.08
VPS13B-207ENST00000518569 EBLN2Q6P2I7 272 aa2.08□□□□□ -2.08
VPS13B-207ENST00000518569 AMTNQ6UX39 209 aa2.08□□□□□ -2.08
VPS13B-207ENST00000518569 TMEM14EPQ6UXP3 125 aa2.08□□□□□ -2.08
VPS13B-207ENST00000518569 IZUMO2Q6UXV1 221 aa2.08□□□□□ -2.08
VPS13B-207ENST00000518569 LCA10Q71F78 164 aa2.08□□□□□ -2.08
VPS13B-207ENST00000518569 LHFPL1Q86WI0 220 aa2.08□□□□□ -2.08
VPS13B-207ENST00000518569 ZNF664Q8N3J9 261 aa2.08□□□□□ -2.08
VPS13B-207ENST00000518569 TTC9CQ8N5M4 171 aa2.08□□□□□ -2.08
VPS13B-207ENST00000518569 LINC00337Q8N6G1 96 aa2.08□□□□□ -2.08
VPS13B-207ENST00000518569 ZDHHC22Q8N966 263 aa2.08□□□□□ -2.08
VPS13B-207ENST00000518569 BPIFB6Q8NFQ5 453 aa2.08□□□□□ -2.08
VPS13B-207ENST00000518569 CAMK2N2Q96S95 79 aa2.08□□□□□ -2.08
VPS13B-207ENST00000518569 PEBP4Q96S96 227 aa2.08□□□□□ -2.08
VPS13B-207ENST00000518569 TM2D3Q9BRN9 247 aa2.08□□□□□ -2.08
VPS13B-207ENST00000518569 DPY30Q9C005 99 aa2.08□□□□□ -2.08
VPS13B-207ENST00000518569 ZNF436Q9C0F3 470 aaPredicted RBP2.08□□□□□ -2.08
VPS13B-207ENST00000518569 NAA60Q9H7X0 242 aa2.08□□□□□ -2.08
VPS13B-207ENST00000518569 ZNF355PQ9NSJ1 428 aa2.08□□□□□ -2.08
VPS13B-207ENST00000518569 ZNF586Q9NXT0 402 aa2.08□□□□□ -2.08
VPS13B-207ENST00000518569 RPL26L1Q9UNX3 145 aaKnown RBP2.08□□□□□ -2.08
VPS13B-207ENST00000518569 COQ4Q9Y3A0 265 aa2.08□□□□□ -2.08
VPS13B-207ENST00000518569 TMEM14AQ9Y6G1 99 aa2.08□□□□□ -2.08
VPS13B-207ENST00000518569 CACNA1BQ00975 2339 aa2.08□□□□□ -2.08
VPS13B-207ENST00000518569 DDX60LQ5H9U9 1706 aaKnown RBP2.08□□□□□ -2.08
VPS13B-207ENST00000518569 PLXNA1Q9UIW2 1896 aa2.07□□□□□ -2.08
VPS13B-207ENST00000518569 TRIOO75962 3097 aa2.07□□□□□ -2.08
VPS13B-207ENST00000518569 IGKV1-27A0A075B6S5 117 aa2.07□□□□□ -2.08
VPS13B-207ENST00000518569 TRAV27A0A087WT01 109 aa2.07□□□□□ -2.08
VPS13B-207ENST00000518569 A0A087X0T9 212 aa2.07□□□□□ -2.08
VPS13B-207ENST00000518569 TCRBV3S1A0A5B6 114 aa2.07□□□□□ -2.08
VPS13B-207ENST00000518569 A8MUN3 132 aa2.07□□□□□ -2.08
VPS13B-207ENST00000518569 H3BMG7 143 aa2.07□□□□□ -2.08
VPS13B-207ENST00000518569 C19orf84I3L1E1 186 aa2.07□□□□□ -2.08
VPS13B-207ENST00000518569 FSTL3O95633 263 aa2.07□□□□□ -2.08
VPS13B-207ENST00000518569 NAPSAO96009 420 aa2.07□□□□□ -2.08
VPS13B-207ENST00000518569 LTAP01374 205 aa2.07□□□□□ -2.08
VPS13B-207ENST00000518569 PMP2P02689 132 aa2.07□□□□□ -2.08
VPS13B-207ENST00000518569 OR5AC1P0C628 307 aa2.07□□□□□ -2.08
VPS13B-207ENST00000518569 IFITM1P13164 125 aa2.07□□□□□ -2.08
VPS13B-207ENST00000518569 HIST1H4AP62805 103 aaKnown RBP2.07□□□□□ -2.08
VPS13B-207ENST00000518569 CCL20P78556 96 aa2.07□□□□□ -2.08
VPS13B-207ENST00000518569 QRFPP83859 136 aa2.07□□□□□ -2.08
VPS13B-207ENST00000518569 PDGFRLQ15198 375 aa2.07□□□□□ -2.08
VPS13B-207ENST00000518569 IQCJQ1A5X6 159 aa2.07□□□□□ -2.08
VPS13B-207ENST00000518569 AADACL3Q5VUY0 350 aa2.07□□□□□ -2.08
VPS13B-207ENST00000518569 Q5XG85 94 aa2.07□□□□□ -2.08
VPS13B-207ENST00000518569 FOXI2Q6ZQN5 318 aa2.07□□□□□ -2.08
VPS13B-207ENST00000518569 PRNTQ86SH4 94 aa2.07□□□□□ -2.08
VPS13B-207ENST00000518569 PDPNQ86YL7 162 aa2.07□□□□□ -2.08
VPS13B-207ENST00000518569 KCNRGQ8N5I3 272 aa2.07□□□□□ -2.08
VPS13B-207ENST00000518569 YIPF7Q8N8F6 280 aa2.07□□□□□ -2.08
VPS13B-207ENST00000518569 FER1L6-AS1Q8NA97 138 aa2.07□□□□□ -2.08
VPS13B-207ENST00000518569 C5orf17Q8NAS9 161 aa2.07□□□□□ -2.08
VPS13B-207ENST00000518569 ZNF555Q8NEP9 628 aa2.07□□□□□ -2.08
VPS13B-207ENST00000518569 OR4K13Q8NH42 304 aa2.07□□□□□ -2.08
VPS13B-207ENST00000518569 ZNF721Q8TF20 911 aa2.07□□□□□ -2.08
VPS13B-207ENST00000518569 C2orf15Q8WU43 125 aaKnown RBP2.07□□□□□ -2.08
VPS13B-207ENST00000518569 BRK1Q8WUW1 75 aa2.07□□□□□ -2.08
VPS13B-207ENST00000518569 H1FXQ92522 213 aaKnown RBP2.07□□□□□ -2.08
VPS13B-207ENST00000518569 AQP10Q96PS8 301 aa2.07□□□□□ -2.08
VPS13B-207ENST00000518569 CIB3Q96Q77 187 aaPredicted RBP2.07□□□□□ -2.08
VPS13B-207ENST00000518569 SAR1AQ9NR31 198 aa2.07□□□□□ -2.08
VPS13B-207ENST00000518569 OTORQ9NRC9 128 aa2.07□□□□□ -2.08
VPS13B-207ENST00000518569 SLC39A9Q9NUM3 307 aa2.07□□□□□ -2.08
VPS13B-207ENST00000518569 ZNF706Q9Y5V0 76 aaPredicted RBP2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms