RNA–Protein interactions for RNA: ENST00000517275.3

RNU6-840P-201, Transcript of RNA, U6 small nuclear 840, pseudogene, humanhuman

BASIC

Gene RNU6-840P, Length 65 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-840P-201ENST00000517275 SNURFQ9Y675 71 aa1.16□□□□□ -2.22
RNU6-840P-201ENST00000517275 ANAPC1Q9H1A4 1944 aa1.16□□□□□ -2.22
RNU6-840P-201ENST00000517275 ARAP1Q96P48 1450 aa1.16□□□□□ -2.22
RNU6-840P-201ENST00000517275 COL4A1P02462 1669 aa1.16□□□□□ -2.22
RNU6-840P-201ENST00000517275 LAMB2P55268 1798 aa1.16□□□□□ -2.22
RNU6-840P-201ENST00000517275 KDM6AO15550 1401 aaPredicted RBP1.15□□□□□ -2.22
RNU6-840P-201ENST00000517275 RP1L1Q8IWN7 2480 aaPredicted RBP1.15□□□□□ -2.22
RNU6-840P-201ENST00000517275 A0A087WX48 190 aa1.15□□□□□ -2.23
RNU6-840P-201ENST00000517275 ODAMA1E959 279 aa1.15□□□□□ -2.23
RNU6-840P-201ENST00000517275 KPNA4O00629 521 aaPredicted RBP1.15□□□□□ -2.23
RNU6-840P-201ENST00000517275 CCL16O15467 120 aa1.15□□□□□ -2.23
RNU6-840P-201ENST00000517275 S100GP29377 79 aa1.15□□□□□ -2.23
RNU6-840P-201ENST00000517275 S100A11P31949 105 aa1.15□□□□□ -2.23
RNU6-840P-201ENST00000517275 CDK6Q00534 326 aa1.15□□□□□ -2.23
RNU6-840P-201ENST00000517275 KLRD1Q13241 179 aa1.15□□□□□ -2.23
RNU6-840P-201ENST00000517275 C2orf82Q6UX34 121 aa1.15□□□□□ -2.23
RNU6-840P-201ENST00000517275 OR4K15Q8NH41 348 aa1.15□□□□□ -2.23
RNU6-840P-201ENST00000517275 PSMF1Q92530 271 aa1.15□□□□□ -2.23
RNU6-840P-201ENST00000517275 POP5Q969H6 163 aaKnown RBP1.15□□□□□ -2.23
RNU6-840P-201ENST00000517275 LINC00526Q96FQ7 95 aa1.15□□□□□ -2.23
RNU6-840P-201ENST00000517275 CCDC115Q96NT0 180 aa1.15□□□□□ -2.23
RNU6-840P-201ENST00000517275 SPANXCQ9NY87 97 aa1.15□□□□□ -2.23
RNU6-840P-201ENST00000517275 ADGBQ8N7X0 1667 aa1.15□□□□□ -2.23
RNU6-840P-201ENST00000517275 INTS1Q8N201 2190 aaKnown RBP1.14□□□□□ -2.23
RNU6-840P-201ENST00000517275 DIDO1Q9BTC0 2240 aaKnown RBP1.14□□□□□ -2.23
RNU6-840P-201ENST00000517275 IGKV2D-26A0A0A0MRZ7 120 aa1.14□□□□□ -2.23
RNU6-840P-201ENST00000517275 TRBV6-8A0A0A6YYG3 113 aa1.14□□□□□ -2.23
RNU6-840P-201ENST00000517275 TRAV10A0A0B4J240 114 aa1.14□□□□□ -2.23
RNU6-840P-201ENST00000517275 ZNF736B4DX44 427 aaPredicted RBP1.14□□□□□ -2.23
RNU6-840P-201ENST00000517275 RPL7P18124 248 aaKnown RBP1.14□□□□□ -2.23
RNU6-840P-201ENST00000517275 MRPS36P82909 103 aaKnown RBP1.14□□□□□ -2.23
RNU6-840P-201ENST00000517275 SURF2Q15527 256 aaPredicted RBP1.14□□□□□ -2.23
RNU6-840P-201ENST00000517275 ALX1Q15699 326 aa1.14□□□□□ -2.23
RNU6-840P-201ENST00000517275 SAMD13Q5VXD3 122 aa1.14□□□□□ -2.23
RNU6-840P-201ENST00000517275 CROCCP2Q86T23 111 aa1.14□□□□□ -2.23
RNU6-840P-201ENST00000517275 FAM216BQ8N7L0 139 aa1.14□□□□□ -2.23
RNU6-840P-201ENST00000517275 KLK9Q9UKQ9 250 aa1.14□□□□□ -2.23
RNU6-840P-201ENST00000517275 TAF1LQ8IZX4 1826 aa1.14□□□□□ -2.23
RNU6-840P-201ENST00000517275 ARHGEF11O15085 1522 aa1.14□□□□□ -2.23
RNU6-840P-201ENST00000517275 HMCN1Q96RW7 5635 aa1.13□□□□□ -2.23
RNU6-840P-201ENST00000517275 NUP98P52948 1817 aa1.13□□□□□ -2.23
RNU6-840P-201ENST00000517275 IGKV3-7A0A075B6H7 116 aa1.13□□□□□ -2.23
RNU6-840P-201ENST00000517275 IGKV2-40A0A087WW87 121 aaPredicted RBP1.13□□□□□ -2.23
RNU6-840P-201ENST00000517275 TRBV27A0A0K0K1C4 114 aa1.13□□□□□ -2.23
RNU6-840P-201ENST00000517275 GABARAPH6UMI1 98 aa1.13□□□□□ -2.23
RNU6-840P-201ENST00000517275 LYRM1O43325 122 aa1.13□□□□□ -2.23
RNU6-840P-201ENST00000517275 NUPR1O60356 82 aa1.13□□□□□ -2.23
RNU6-840P-201ENST00000517275 KRTAP5-8O75690 187 aa1.13□□□□□ -2.23
RNU6-840P-201ENST00000517275 ERC2-IT1O76042 136 aa1.13□□□□□ -2.23
RNU6-840P-201ENST00000517275 IGKV2D-40P01614 121 aaPredicted RBP1.13□□□□□ -2.23
RNU6-840P-201ENST00000517275 SCGB1A1P11684 91 aa1.13□□□□□ -2.23
RNU6-840P-201ENST00000517275 IL9P15248 144 aa1.13□□□□□ -2.23
RNU6-840P-201ENST00000517275 RPS3P23396 243 aaKnown RBP eCLIP1.13□□□□□ -2.23
RNU6-840P-201ENST00000517275 ARPINQ7Z6K5 226 aa1.13□□□□□ -2.23
RNU6-840P-201ENST00000517275 OR5D14Q8NGL3 314 aa1.13□□□□□ -2.23
RNU6-840P-201ENST00000517275 GRPEL2Q8TAA5 225 aa1.13□□□□□ -2.23
RNU6-840P-201ENST00000517275 MUCL1Q96DR8 90 aa1.13□□□□□ -2.23
RNU6-840P-201ENST00000517275 LXNQ9BS40 222 aa1.13□□□□□ -2.23
RNU6-840P-201ENST00000517275 TAF9BQ9HBM6 251 aa1.13□□□□□ -2.23
RNU6-840P-201ENST00000517275 ARFGEF3Q5TH69 2177 aa1.13□□□□□ -2.23
RNU6-840P-201ENST00000517275 FREM3P0C091 2139 aa1.12□□□□□ -2.23
RNU6-840P-201ENST00000517275 A0A1B0GX51 115 aa1.12□□□□□ -2.23
RNU6-840P-201ENST00000517275 hDV103S1A0JD37 113 aa1.12□□□□□ -2.23
RNU6-840P-201ENST00000517275 K7ERJ3 54 aa1.12□□□□□ -2.23
RNU6-840P-201ENST00000517275 M0R233 179 aa1.12□□□□□ -2.23
RNU6-840P-201ENST00000517275 CXCL8P10145 99 aa1.12□□□□□ -2.23
RNU6-840P-201ENST00000517275 SDC2P34741 201 aa1.12□□□□□ -2.23
RNU6-840P-201ENST00000517275 NDUFA6P56556 154 aa1.12□□□□□ -2.23
RNU6-840P-201ENST00000517275 TEX261Q6UWH6 196 aa1.12□□□□□ -2.23
RNU6-840P-201ENST00000517275 HRCT1Q6UXD1 115 aa1.12□□□□□ -2.23
RNU6-840P-201ENST00000517275 CLECL1Q8IZS7 167 aa1.12□□□□□ -2.23
RNU6-840P-201ENST00000517275 OR10AG1Q8NH19 301 aa1.12□□□□□ -2.23
RNU6-840P-201ENST00000517275 RAB37Q96AX2 223 aa1.12□□□□□ -2.23
RNU6-840P-201ENST00000517275 ZC2HC1AQ96GY0 325 aa1.12□□□□□ -2.23
RNU6-840P-201ENST00000517275 LINC00052Q96N35 136 aa1.12□□□□□ -2.23
RNU6-840P-201ENST00000517275 U3KQ87 197 aa1.12□□□□□ -2.23
RNU6-840P-201ENST00000517275 KIAA1107Q9UPP5 1409 aa1.12□□□□□ -2.23
RNU6-840P-201ENST00000517275 FRMPD1Q5SYB0 1578 aa1.12□□□□□ -2.23
RNU6-840P-201ENST00000517275 MYH10P35580 1976 aa1.12□□□□□ -2.23
RNU6-840P-201ENST00000517275 LOC105371267A0A1B0GV96 52 aa1.11□□□□□ -2.23
RNU6-840P-201ENST00000517275 IGKV2-29A2NJV5 120 aaPredicted RBP1.11□□□□□ -2.23
RNU6-840P-201ENST00000517275 OR2T8A6NH00 312 aa1.11□□□□□ -2.23
RNU6-840P-201ENST00000517275 ARL5CA6NH57 179 aa1.11□□□□□ -2.23
RNU6-840P-201ENST00000517275 H3BMG7 143 aa1.11□□□□□ -2.23
RNU6-840P-201ENST00000517275 ARL14EPLP0DKL9 152 aa1.11□□□□□ -2.23
RNU6-840P-201ENST00000517275 SRP9P49458 86 aaKnown RBP1.11□□□□□ -2.23
RNU6-840P-201ENST00000517275 MPV17LQ2QL34 196 aa1.11□□□□□ -2.23
RNU6-840P-201ENST00000517275 LINC00305Q7Z4B0 112 aa1.11□□□□□ -2.23
RNU6-840P-201ENST00000517275 OR5AS1Q8N127 324 aa1.11□□□□□ -2.23
RNU6-840P-201ENST00000517275 TMEM229BQ8NBD8 167 aa1.11□□□□□ -2.23
RNU6-840P-201ENST00000517275 TMEM35BQ8NCS4 154 aa1.11□□□□□ -2.23
RNU6-840P-201ENST00000517275 C10orf105Q8TEF2 133 aa1.11□□□□□ -2.23
RNU6-840P-201ENST00000517275 ZNF431Q8TF32 576 aaPredicted RBP1.11□□□□□ -2.23
RNU6-840P-201ENST00000517275 NAT14Q8WUY8 206 aa1.11□□□□□ -2.23
RNU6-840P-201ENST00000517275 ORMDL1Q9P0S3 153 aa1.11□□□□□ -2.23
RNU6-840P-201ENST00000517275 MUC6Q6W4X9 2439 aa1.1□□□□□ -2.23
RNU6-840P-201ENST00000517275 KIAA1549Q9HCM3 1950 aa1.1□□□□□ -2.23
RNU6-840P-201ENST00000517275 BORCS7-ASMTA0A0B4J1R7 106 aa1.1□□□□□ -2.23
RNU6-840P-201ENST00000517275 TRBV6-4A0A1B0GX49 114 aa1.1□□□□□ -2.23
RNU6-840P-201ENST00000517275 IGHV3-33P01772 117 aa1.1□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms