RNA–Protein interactions for RNA: ENST00000512332.5

CPNE4-210, Transcript of copine 4, humanhuman

TSL 1 (best) BASIC

Gene CPNE4, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-210ENST00000512332 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.24□□□□□ -1.25
CPNE4-210ENST00000512332 A0A1B0GUT8 65 aa7.24□□□□□ -1.25
CPNE4-210ENST00000512332 SH2D7A6NKC9 451 aaPredicted RBP7.24□□□□□ -1.25
CPNE4-210ENST00000512332 CHEK1O14757 476 aa7.24□□□□□ -1.25
CPNE4-210ENST00000512332 OR5AL1P0C617 328 aa7.24□□□□□ -1.25
CPNE4-210ENST00000512332 CD24P25063 80 aa7.24□□□□□ -1.25
CPNE4-210ENST00000512332 S100A7P31151 101 aa7.24□□□□□ -1.25
CPNE4-210ENST00000512332 RIGQ13278 110 aa7.24□□□□□ -1.25
CPNE4-210ENST00000512332 EBLN2Q6P2I7 272 aa7.24□□□□□ -1.25
CPNE4-210ENST00000512332 DYNAPQ8N1N2 210 aa7.24□□□□□ -1.25
CPNE4-210ENST00000512332 SIRPDQ9H106 197 aa7.24□□□□□ -1.25
CPNE4-210ENST00000512332 DCHS1Q96JQ0 3298 aa7.24□□□□□ -1.25
CPNE4-210ENST00000512332 RPL7P18124 248 aaKnown RBP7.24□□□□□ -1.25
CPNE4-210ENST00000512332 NDPQ00604 133 aa7.24□□□□□ -1.25
CPNE4-210ENST00000512332 FBLN7Q53RD9 439 aa7.24□□□□□ -1.25
CPNE4-210ENST00000512332 ARHGAP32A7KAX9 2087 aa7.23□□□□□ -1.25
CPNE4-210ENST00000512332 TRAV9-2A0A087WT02 112 aa7.23□□□□□ -1.25
CPNE4-210ENST00000512332 NCBP2LA6PVI3 153 aaKnown RBP7.23□□□□□ -1.25
CPNE4-210ENST00000512332 RPLP1P05386 114 aaKnown RBP7.23□□□□□ -1.25
CPNE4-210ENST00000512332 LINC00614P0C842 121 aa7.23□□□□□ -1.25
CPNE4-210ENST00000512332 FAM106CPP0CH98 169 aa7.23□□□□□ -1.25
CPNE4-210ENST00000512332 EGR2P11161 476 aaPredicted RBP7.23□□□□□ -1.25
CPNE4-210ENST00000512332 ZFP36P26651 326 aaKnown RBP7.23□□□□□ -1.25
CPNE4-210ENST00000512332 CSN1S1P47710 185 aa7.23□□□□□ -1.25
CPNE4-210ENST00000512332 CRIP1P50238 77 aa7.23□□□□□ -1.25
CPNE4-210ENST00000512332 Q56UQ5 140 aa7.23□□□□□ -1.25
CPNE4-210ENST00000512332 TMEM70Q9BUB7 260 aa7.23□□□□□ -1.25
CPNE4-210ENST00000512332 IGHV7-81A0A0B4J1V7 117 aa7.23□□□□□ -1.25
CPNE4-210ENST00000512332 NDUFB8O95169 186 aa7.23□□□□□ -1.25
CPNE4-210ENST00000512332 CTSGP08311 255 aa7.23□□□□□ -1.25
CPNE4-210ENST00000512332 TMEM11P17152 192 aa7.23□□□□□ -1.25
CPNE4-210ENST00000512332 UBE2E1P51965 193 aa7.23□□□□□ -1.25
CPNE4-210ENST00000512332 SAPCD1Q5SSQ6 148 aa7.23□□□□□ -1.25
CPNE4-210ENST00000512332 FAM120AOSQ5T036 256 aa7.23□□□□□ -1.25
CPNE4-210ENST00000512332 ZNF493Q6ZR52 646 aa7.23□□□□□ -1.25
CPNE4-210ENST00000512332 CT45A10P0DMU9 189 aa7.22□□□□□ -1.25
CPNE4-210ENST00000512332 Q8N9W7 124 aa7.22□□□□□ -1.25
CPNE4-210ENST00000512332 ZZEF1O43149 2961 aa7.22□□□□□ -1.25
CPNE4-210ENST00000512332 IGHV1-24A0A0C4DH33 117 aa7.21□□□□□ -1.25
CPNE4-210ENST00000512332 IGHV2-70DA0A0C4DH43 119 aa7.21□□□□□ -1.25
CPNE4-210ENST00000512332 A0A1W2PRD5 423 aa7.21□□□□□ -1.25
CPNE4-210ENST00000512332 A0A1W2PRF3 423 aa7.21□□□□□ -1.25
CPNE4-210ENST00000512332 A0A1W2PRM7 423 aa7.21□□□□□ -1.25
CPNE4-210ENST00000512332 M0R3E3 92 aa7.21□□□□□ -1.25
CPNE4-210ENST00000512332 TOX4O94842 621 aa7.21□□□□□ -1.25
CPNE4-210ENST00000512332 EFNA4P52798 201 aa7.21□□□□□ -1.25
CPNE4-210ENST00000512332 LCN12Q6JVE5 192 aa7.21□□□□□ -1.25
CPNE4-210ENST00000512332 BCL6BQ8N143 479 aaPredicted RBP7.21□□□□□ -1.25
CPNE4-210ENST00000512332 RABAC1Q9UI14 185 aa7.21□□□□□ -1.25
CPNE4-210ENST00000512332 MRPS16Q9Y3D3 137 aaKnown RBP7.21□□□□□ -1.25
CPNE4-210ENST00000512332 A0A1W2PPR1 153 aa7.21□□□□□ -1.26
CPNE4-210ENST00000512332 LEPROTL1O95214 131 aa7.21□□□□□ -1.26
CPNE4-210ENST00000512332 ARMS2P0C7Q2 107 aa7.21□□□□□ -1.26
CPNE4-210ENST00000512332 SFTPCP11686 197 aa7.21□□□□□ -1.26
CPNE4-210ENST00000512332 RAB9AP51151 201 aa7.21□□□□□ -1.26
CPNE4-210ENST00000512332 COL5A1-AS1Q5SY13 56 aa7.21□□□□□ -1.26
CPNE4-210ENST00000512332 Q71RC1 249 aaPredicted RBP7.21□□□□□ -1.26
CPNE4-210ENST00000512332 FAM110DQ8TAY7 271 aaPredicted RBP7.21□□□□□ -1.26
CPNE4-210ENST00000512332 AJUBAQ96IF1 538 aa7.21□□□□□ -1.26
CPNE4-210ENST00000512332 S4R3C0 116 aa7.21□□□□□ -1.26
CPNE4-210ENST00000512332 SYS1-DBNDD2H3BUS1 97 aa7.2□□□□□ -1.26
CPNE4-210ENST00000512332 SRSF2Q01130 221 aaKnown RBP7.2□□□□□ -1.26
CPNE4-210ENST00000512332 GAGE1Q13065 139 aa7.2□□□□□ -1.26
CPNE4-210ENST00000512332 COL25A1Q9BXS0 654 aaPredicted RBP7.2□□□□□ -1.26
CPNE4-210ENST00000512332 LPAR2Q9HBW0 351 aa7.2□□□□□ -1.26
CPNE4-210ENST00000512332 OR2T8A6NH00 312 aa7.2□□□□□ -1.26
CPNE4-210ENST00000512332 Q6ZN92 141 aa7.2□□□□□ -1.26
CPNE4-210ENST00000512332 ZNF502Q8TBZ5 544 aa7.2□□□□□ -1.26
CPNE4-210ENST00000512332 PRR25Q96S07 402 aa7.2□□□□□ -1.26
CPNE4-210ENST00000512332 A0A087X0K7 114 aa7.19□□□□□ -1.26
CPNE4-210ENST00000512332 TMEM189A5PLL7 270 aa7.19□□□□□ -1.26
CPNE4-210ENST00000512332 HNRNPA3P51991 378 aaKnown RBP7.19□□□□□ -1.26
CPNE4-210ENST00000512332 RPS20P60866 119 aaKnown RBP7.19□□□□□ -1.26
CPNE4-210ENST00000512332 NHLH1Q02575 133 aa7.19□□□□□ -1.26
CPNE4-210ENST00000512332 PET117Q6UWS5 81 aa7.19□□□□□ -1.26
CPNE4-210ENST00000512332 C8orf49Q96NF6 230 aa7.19□□□□□ -1.26
CPNE4-210ENST00000512332 HSPB8Q9UJY1 196 aa7.19□□□□□ -1.26
CPNE4-210ENST00000512332 LAMTOR2Q9Y2Q5 125 aa7.19□□□□□ -1.26
CPNE4-210ENST00000512332 SMAD5-AS1Q9Y6J3 95 aa7.19□□□□□ -1.26
CPNE4-210ENST00000512332 IGF2RP11717 2491 aa7.19□□□□□ -1.26
CPNE4-210ENST00000512332 M0QZ24 198 aa7.19□□□□□ -1.26
CPNE4-210ENST00000512332 IGLL1P15814 213 aa7.19□□□□□ -1.26
CPNE4-210ENST00000512332 TSPOP30536 169 aa7.19□□□□□ -1.26
CPNE4-210ENST00000512332 BMI1P35226 326 aa7.19□□□□□ -1.26
CPNE4-210ENST00000512332 LMO4P61968 165 aa7.19□□□□□ -1.26
CPNE4-210ENST00000512332 SPATA12Q7Z6I5 190 aa7.19□□□□□ -1.26
CPNE4-210ENST00000512332 ATOH7Q8N100 152 aa7.19□□□□□ -1.26
CPNE4-210ENST00000512332 ST20Q9HBF5 79 aa7.19□□□□□ -1.26
CPNE4-210ENST00000512332 CLEC5AQ9NY25 188 aa7.19□□□□□ -1.26
CPNE4-210ENST00000512332 U3KQK5 164 aa7.19□□□□□ -1.26
CPNE4-210ENST00000512332 NBASA2RRP1 2371 aa7.18□□□□□ -1.26
CPNE4-210ENST00000512332 OR4C46A6NHA9 309 aa7.18□□□□□ -1.26
CPNE4-210ENST00000512332 SH2D1AO60880 128 aa7.18□□□□□ -1.26
CPNE4-210ENST00000512332 NDUFS7O75251 213 aa7.18□□□□□ -1.26
CPNE4-210ENST00000512332 IGHG4P01861 327 aa7.18□□□□□ -1.26
CPNE4-210ENST00000512332 ZNF25P17030 456 aaPredicted RBP7.18□□□□□ -1.26
CPNE4-210ENST00000512332 RELQ04864 619 aaPredicted RBP7.18□□□□□ -1.26
CPNE4-210ENST00000512332 MAJINQ3KP22 176 aa7.18□□□□□ -1.26
CPNE4-210ENST00000512332 ATP6V0BQ99437 205 aa7.18□□□□□ -1.26
CPNE4-210ENST00000512332 MAP1LC3CQ9BXW4 147 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms