RNA–Protein interactions for RNA: ENST00000509043.1

HTT-205, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 380 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-205ENST00000509043 C9orf139Q6ZV77 190 aa7.18□□□□□ -1.26
HTT-205ENST00000509043 CIARTQ8N365 385 aaPredicted RBP7.18□□□□□ -1.26
HTT-205ENST00000509043 GBGT1Q8N5D6 347 aa7.18□□□□□ -1.26
HTT-205ENST00000509043 TEX29Q8N6K0 151 aa7.18□□□□□ -1.26
HTT-205ENST00000509043 NHLRC2Q8NBF2 726 aa7.18□□□□□ -1.26
HTT-205ENST00000509043 MRPL53Q96EL3 112 aaKnown RBP7.18□□□□□ -1.26
HTT-205ENST00000509043 CCDC140Q96MF4 163 aa7.18□□□□□ -1.26
HTT-205ENST00000509043 NIT2Q9NQR4 276 aa7.18□□□□□ -1.26
HTT-205ENST00000509043 PSG8Q9UQ74 426 aa7.18□□□□□ -1.26
HTT-205ENST00000509043 DCHS2Q6V1P9 2916 aa7.17□□□□□ -1.26
HTT-205ENST00000509043 HIGD1CA8MV81 97 aa7.17□□□□□ -1.26
HTT-205ENST00000509043 NDUFA4O00483 81 aa7.17□□□□□ -1.26
HTT-205ENST00000509043 APCSP02743 223 aa7.17□□□□□ -1.26
HTT-205ENST00000509043 AMBPP02760 352 aa7.17□□□□□ -1.26
HTT-205ENST00000509043 TRGV3P03979 118 aa7.17□□□□□ -1.26
HTT-205ENST00000509043 PRB1P04280 392 aa7.17□□□□□ -1.26
HTT-205ENST00000509043 COL8A1P27658 744 aa7.17□□□□□ -1.26
HTT-205ENST00000509043 HBBP68871 147 aa7.17□□□□□ -1.26
HTT-205ENST00000509043 DMRTA1Q5VZB9 504 aa7.17□□□□□ -1.26
HTT-205ENST00000509043 RBPMS2Q6ZRY4 209 aaKnown RBP7.17□□□□□ -1.26
HTT-205ENST00000509043 PRNTQ86SH4 94 aa7.17□□□□□ -1.26
HTT-205ENST00000509043 TMEM219Q86XT9 240 aa7.17□□□□□ -1.26
HTT-205ENST00000509043 NUP35Q8NFH5 326 aa7.17□□□□□ -1.26
HTT-205ENST00000509043 NEU1Q99519 415 aa7.17□□□□□ -1.26
HTT-205ENST00000509043 S4R3C0 116 aa7.17□□□□□ -1.26
HTT-205ENST00000509043 U3KQE9 123 aa7.17□□□□□ -1.26
HTT-205ENST00000509043 IGHV3OR16-10A0A075B7F0 116 aa7.16□□□□□ -1.26
HTT-205ENST00000509043 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.16□□□□□ -1.26
HTT-205ENST00000509043 A0A1B0GXF2 115 aa7.16□□□□□ -1.26
HTT-205ENST00000509043 LINC01548A6NM66 108 aa7.16□□□□□ -1.26
HTT-205ENST00000509043 H3BTX0 84 aa7.16□□□□□ -1.26
HTT-205ENST00000509043 IGHV3-23P01764 117 aa7.16□□□□□ -1.26
HTT-205ENST00000509043 PPIFP30405 207 aaKnown RBP7.16□□□□□ -1.26
HTT-205ENST00000509043 TCL1AP56279 114 aa7.16□□□□□ -1.26
HTT-205ENST00000509043 TPPP2P59282 170 aa7.16□□□□□ -1.26
HTT-205ENST00000509043 RPS20P60866 119 aaKnown RBP7.16□□□□□ -1.26
HTT-205ENST00000509043 SRSF2Q01130 221 aaKnown RBP7.16□□□□□ -1.26
HTT-205ENST00000509043 SRSF1Q07955 248 aaKnown RBP eCLIP7.16□□□□□ -1.26
HTT-205ENST00000509043 JOSD1Q15040 202 aaPredicted RBP7.16□□□□□ -1.26
HTT-205ENST00000509043 DEFB113Q30KQ7 82 aa7.16□□□□□ -1.26
HTT-205ENST00000509043 PYY3Q5JQD4 70 aa7.16□□□□□ -1.26
HTT-205ENST00000509043 CLEC19AQ6UXS0 136 aa7.16□□□□□ -1.26
HTT-205ENST00000509043 NDFIP1Q9BT67 221 aa7.16□□□□□ -1.26
HTT-205ENST00000509043 GNB4Q9HAV0 340 aa7.16□□□□□ -1.26
HTT-205ENST00000509043 RELNP78509 3460 aa7.15□□□□□ -1.26
HTT-205ENST00000509043 ZNF785A8K8V0 405 aa7.15□□□□□ -1.26
HTT-205ENST00000509043 IGLV1-40P01703 118 aa7.15□□□□□ -1.26
HTT-205ENST00000509043 SNRPCP09234 159 aaKnown RBP7.15□□□□□ -1.26
HTT-205ENST00000509043 BMI1P35226 326 aa7.15□□□□□ -1.26
HTT-205ENST00000509043 ARL3P36405 182 aa7.15□□□□□ -1.26
HTT-205ENST00000509043 RAB4BP61018 213 aa7.15□□□□□ -1.26
HTT-205ENST00000509043 PDZD11Q5EBL8 140 aa7.15□□□□□ -1.26
HTT-205ENST00000509043 C9orf152Q5JTZ5 239 aa7.15□□□□□ -1.26
HTT-205ENST00000509043 SAMD13Q5VXD3 122 aa7.15□□□□□ -1.26
HTT-205ENST00000509043 MRPL54Q6P161 138 aaKnown RBP7.15□□□□□ -1.26
HTT-205ENST00000509043 BAGE3Q86Y29 109 aa7.15□□□□□ -1.26
HTT-205ENST00000509043 C17orf77Q96MU5 243 aa7.15□□□□□ -1.26
HTT-205ENST00000509043 USP24Q9UPU5 2620 aa7.15□□□□□ -1.26
HTT-205ENST00000509043 TRAV8-1A0A0A6YYK1 113 aa7.14□□□□□ -1.27
HTT-205ENST00000509043 A0A1W2PS18 150 aa7.14□□□□□ -1.27
HTT-205ENST00000509043 CLPSL1A2RUU4 121 aa7.14□□□□□ -1.27
HTT-205ENST00000509043 A8MWP6 167 aa7.14□□□□□ -1.27
HTT-205ENST00000509043 CHEK1O14757 476 aa7.14□□□□□ -1.27
HTT-205ENST00000509043 CA1P00915 261 aaPredicted RBP7.14□□□□□ -1.27
HTT-205ENST00000509043 TGFAP01135 160 aa7.14□□□□□ -1.27
HTT-205ENST00000509043 FSHBP01225 129 aa7.14□□□□□ -1.27
HTT-205ENST00000509043 KLF5Q13887 457 aaPredicted RBP7.14□□□□□ -1.27
HTT-205ENST00000509043 OR2D3Q8NGH3 330 aa7.14□□□□□ -1.27
HTT-205ENST00000509043 BORCS7Q96B45 105 aa7.14□□□□□ -1.27
HTT-205ENST00000509043 MS4A10Q96PG2 267 aa7.14□□□□□ -1.27
HTT-205ENST00000509043 PPP1R14DQ9NXH3 145 aa7.14□□□□□ -1.27
HTT-205ENST00000509043 SMAD5-AS1Q9Y6J3 95 aa7.14□□□□□ -1.27
HTT-205ENST00000509043 UBR5O95071 2799 aaPredicted RBP7.14□□□□□ -1.27
HTT-205ENST00000509043 M0R3E3 92 aa7.13□□□□□ -1.27
HTT-205ENST00000509043 CFHR3Q02985 330 aa7.13□□□□□ -1.27
HTT-205ENST00000509043 RIGQ13278 110 aa7.13□□□□□ -1.27
HTT-205ENST00000509043 LY6EQ16553 131 aa7.13□□□□□ -1.27
HTT-205ENST00000509043 IQCJQ1A5X6 159 aa7.13□□□□□ -1.27
HTT-205ENST00000509043 LCN12Q6JVE5 192 aa7.13□□□□□ -1.27
HTT-205ENST00000509043 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.13□□□□□ -1.27
HTT-205ENST00000509043 LINC00322Q6ZN03 302 aaPredicted RBP7.13□□□□□ -1.27
HTT-205ENST00000509043 BCL6BQ8N143 479 aaPredicted RBP7.13□□□□□ -1.27
HTT-205ENST00000509043 GATD1Q8NB37 220 aa7.13□□□□□ -1.27
HTT-205ENST00000509043 ZC2HC1AQ96GY0 325 aa7.13□□□□□ -1.27
HTT-205ENST00000509043 SGK494Q96LW2 274 aa7.13□□□□□ -1.27
HTT-205ENST00000509043 PRR25Q96S07 402 aa7.13□□□□□ -1.27
HTT-205ENST00000509043 PRDM13Q9H4Q3 707 aa7.13□□□□□ -1.27
HTT-205ENST00000509043 GSN-AS1Q9NRJ2 163 aa7.13□□□□□ -1.27
HTT-205ENST00000509043 LENEPQ9Y5L5 61 aa7.13□□□□□ -1.27
HTT-205ENST00000509043 WNK2Q9Y3S1 2297 aa7.12□□□□□ -1.27
HTT-205ENST00000509043 USP9XQ93008 2570 aaPredicted RBP7.12□□□□□ -1.27
HTT-205ENST00000509043 A0A1B0GUT8 65 aa7.12□□□□□ -1.27
HTT-205ENST00000509043 A1L4Q6 167 aa7.12□□□□□ -1.27
HTT-205ENST00000509043 SH2D7A6NKC9 451 aaPredicted RBP7.12□□□□□ -1.27
HTT-205ENST00000509043 PCP4L1A6NKN8 68 aa7.12□□□□□ -1.27
HTT-205ENST00000509043 K7EMT4 169 aa7.12□□□□□ -1.27
HTT-205ENST00000509043 SPINK4O60575 86 aa7.12□□□□□ -1.27
HTT-205ENST00000509043 AVPP01185 164 aa7.12□□□□□ -1.27
HTT-205ENST00000509043 IGHG4P01861 327 aa7.12□□□□□ -1.27
HTT-205ENST00000509043 IGHV4-31P0DP07 118 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms