RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 OR4C6Q8NH72 309 aa1.76□□□□□ -2.13
TRAPPC13-209ENST00000508304 ZCCHC13Q8WW36 166 aaKnown RBP1.76□□□□□ -2.13
TRAPPC13-209ENST00000508304 TP53RKQ96S44 253 aa1.76□□□□□ -2.13
TRAPPC13-209ENST00000508304 NAA38Q9BRA0 125 aaKnown RBP1.76□□□□□ -2.13
TRAPPC13-209ENST00000508304 CALML5Q9NZT1 146 aa1.76□□□□□ -2.13
TRAPPC13-209ENST00000508304 KLK9Q9UKQ9 250 aa1.76□□□□□ -2.13
TRAPPC13-209ENST00000508304 TPRKBQ9Y3C4 175 aa1.76□□□□□ -2.13
TRAPPC13-209ENST00000508304 ADGBQ8N7X0 1667 aa1.76□□□□□ -2.13
TRAPPC13-209ENST00000508304 MYH10P35580 1976 aa1.76□□□□□ -2.13
TRAPPC13-209ENST00000508304 ARHGEF11O15085 1522 aa1.76□□□□□ -2.13
TRAPPC13-209ENST00000508304 ANAPC1Q9H1A4 1944 aa1.76□□□□□ -2.13
TRAPPC13-209ENST00000508304 PLXNA3P51805 1871 aa1.75□□□□□ -2.13
TRAPPC13-209ENST00000508304 DIDO1Q9BTC0 2240 aaKnown RBP1.75□□□□□ -2.13
TRAPPC13-209ENST00000508304 FREM1Q5H8C1 2179 aa1.75□□□□□ -2.13
TRAPPC13-209ENST00000508304 ARHGEF10O15013 1369 aa1.75□□□□□ -2.13
TRAPPC13-209ENST00000508304 PIK3C2AO00443 1686 aa1.75□□□□□ -2.13
TRAPPC13-209ENST00000508304 TRAV36DV7A0A075B6V5 113 aa1.75□□□□□ -2.13
TRAPPC13-209ENST00000508304 BORCS7-ASMTA0A0B4J1R7 106 aa1.75□□□□□ -2.13
TRAPPC13-209ENST00000508304 hDV103S1A0JD37 113 aa1.75□□□□□ -2.13
TRAPPC13-209ENST00000508304 ERC2-IT1O76042 136 aa1.75□□□□□ -2.13
TRAPPC13-209ENST00000508304 DPM2O94777 84 aa1.75□□□□□ -2.13
TRAPPC13-209ENST00000508304 RPS3P23396 243 aaKnown RBP eCLIP1.75□□□□□ -2.13
TRAPPC13-209ENST00000508304 SRP9P49458 86 aaKnown RBP1.75□□□□□ -2.13
TRAPPC13-209ENST00000508304 LSM3P62310 102 aaKnown RBP1.75□□□□□ -2.13
TRAPPC13-209ENST00000508304 MRPS36P82909 103 aaKnown RBP1.75□□□□□ -2.13
TRAPPC13-209ENST00000508304 PDE6HQ13956 83 aa1.75□□□□□ -2.13
TRAPPC13-209ENST00000508304 C10orf55Q5SWW7 151 aa1.75□□□□□ -2.13
TRAPPC13-209ENST00000508304 TEX261Q6UWH6 196 aa1.75□□□□□ -2.13
TRAPPC13-209ENST00000508304 GKN2Q86XP6 184 aa1.75□□□□□ -2.13
TRAPPC13-209ENST00000508304 BRK1Q8WUW1 75 aa1.75□□□□□ -2.13
TRAPPC13-209ENST00000508304 RAB37Q96AX2 223 aa1.75□□□□□ -2.13
TRAPPC13-209ENST00000508304 ZC2HC1AQ96GY0 325 aa1.75□□□□□ -2.13
TRAPPC13-209ENST00000508304 ZNF625Q96I27 306 aaPredicted RBP1.75□□□□□ -2.13
TRAPPC13-209ENST00000508304 HYLS1Q96M11 299 aa1.75□□□□□ -2.13
TRAPPC13-209ENST00000508304 TMEM138Q9NPI0 162 aa1.75□□□□□ -2.13
TRAPPC13-209ENST00000508304 SNURFQ9Y675 71 aa1.75□□□□□ -2.13
TRAPPC13-209ENST00000508304 U3KQ87 197 aa1.75□□□□□ -2.13
TRAPPC13-209ENST00000508304 EML6Q6ZMW3 1958 aa1.75□□□□□ -2.13
TRAPPC13-209ENST00000508304 NUP98P52948 1817 aa1.75□□□□□ -2.13
TRAPPC13-209ENST00000508304 A2MP01023 1474 aa1.75□□□□□ -2.13
TRAPPC13-209ENST00000508304 STRCP1A6NGW2 1772 aa1.75□□□□□ -2.13
TRAPPC13-209ENST00000508304 RTL9Q8NET4 1388 aa1.74□□□□□ -2.13
TRAPPC13-209ENST00000508304 IGKV2D-26A0A0A0MRZ7 120 aa1.74□□□□□ -2.13
TRAPPC13-209ENST00000508304 TRBV6-8A0A0A6YYG3 113 aa1.74□□□□□ -2.13
TRAPPC13-209ENST00000508304 TRAV10A0A0B4J240 114 aa1.74□□□□□ -2.13
TRAPPC13-209ENST00000508304 H3BMG7 143 aa1.74□□□□□ -2.13
TRAPPC13-209ENST00000508304 ARPC5O15511 151 aa1.74□□□□□ -2.13
TRAPPC13-209ENST00000508304 TPT1P13693 172 aaKnown RBP1.74□□□□□ -2.13
TRAPPC13-209ENST00000508304 FABP4P15090 132 aa1.74□□□□□ -2.13
TRAPPC13-209ENST00000508304 ROMO1P60602 79 aa1.74□□□□□ -2.13
TRAPPC13-209ENST00000508304 RPS28P62857 69 aaKnown RBP1.74□□□□□ -2.13
TRAPPC13-209ENST00000508304 FAM74A1Q5RGS3 127 aa1.74□□□□□ -2.13
TRAPPC13-209ENST00000508304 Q6ZRN7 208 aaPredicted RBP1.74□□□□□ -2.13
TRAPPC13-209ENST00000508304 OR51A4Q8NGJ6 313 aa1.74□□□□□ -2.13
TRAPPC13-209ENST00000508304 GGACTQ9BVM4 153 aa1.74□□□□□ -2.13
TRAPPC13-209ENST00000508304 N4BP2Q86UW6 1770 aaPredicted RBP1.74□□□□□ -2.13
TRAPPC13-209ENST00000508304 CCDC88CQ9P219 2028 aa1.74□□□□□ -2.13
TRAPPC13-209ENST00000508304 OVOS2A0A0G2JMS6 1433 aa1.74□□□□□ -2.13
TRAPPC13-209ENST00000508304 KDM6AO15550 1401 aaPredicted RBP1.74□□□□□ -2.13
TRAPPC13-209ENST00000508304 MED12LQ86YW9 2145 aa1.73□□□□□ -2.13
TRAPPC13-209ENST00000508304 MYO5AQ9Y4I1 1855 aaKnown RBP1.73□□□□□ -2.13
TRAPPC13-209ENST00000508304 MICAL3Q7RTP6 2002 aa1.73□□□□□ -2.13
TRAPPC13-209ENST00000508304 LOC107984640A0A0U1RRK4 108 aa1.73□□□□□ -2.13
TRAPPC13-209ENST00000508304 A0A1B0GX51 115 aa1.73□□□□□ -2.13
TRAPPC13-209ENST00000508304 TMEM189A5PLL7 270 aa1.73□□□□□ -2.13
TRAPPC13-209ENST00000508304 M0QZK8 103 aa1.73□□□□□ -2.13
TRAPPC13-209ENST00000508304 DSCR4P56555 118 aaPredicted RBP1.73□□□□□ -2.13
TRAPPC13-209ENST00000508304 TCTE3Q8IZS6 198 aa1.73□□□□□ -2.13
TRAPPC13-209ENST00000508304 ZNF563Q8TA94 476 aa1.73□□□□□ -2.13
TRAPPC13-209ENST00000508304 OR4C12Q96R67 309 aa1.73□□□□□ -2.13
TRAPPC13-209ENST00000508304 JPT1Q9UK76 154 aa1.73□□□□□ -2.13
TRAPPC13-209ENST00000508304 BAZ2BQ9UIF8 2168 aaKnown RBP1.72□□□□□ -2.13
TRAPPC13-209ENST00000508304 HEATR5BQ9P2D3 2071 aa1.72□□□□□ -2.13
TRAPPC13-209ENST00000508304 NUP210Q8TEM1 1887 aaPredicted RBP1.72□□□□□ -2.13
TRAPPC13-209ENST00000508304 TRAV27A0A087WT01 109 aa1.72□□□□□ -2.13
TRAPPC13-209ENST00000508304 A0A096LPI6 279 aa1.72□□□□□ -2.13
TRAPPC13-209ENST00000508304 TRBV7-6A0A0J9YX20 115 aa1.72□□□□□ -2.13
TRAPPC13-209ENST00000508304 TRBV27A0A0K0K1C4 114 aa1.72□□□□□ -2.13
TRAPPC13-209ENST00000508304 PAEPP09466 180 aa1.72□□□□□ -2.13
TRAPPC13-209ENST00000508304 SDC4P31431 198 aa1.72□□□□□ -2.13
TRAPPC13-209ENST00000508304 MAXP61244 160 aa1.72□□□□□ -2.13
TRAPPC13-209ENST00000508304 PSPHP78330 225 aa1.72□□□□□ -2.13
TRAPPC13-209ENST00000508304 S100A12P80511 92 aa1.72□□□□□ -2.13
TRAPPC13-209ENST00000508304 C1orf137Q5JT78 98 aa1.72□□□□□ -2.13
TRAPPC13-209ENST00000508304 C1orf134Q5TEV5 83 aa1.72□□□□□ -2.13
TRAPPC13-209ENST00000508304 TEN1Q86WV5 123 aa1.72□□□□□ -2.13
TRAPPC13-209ENST00000508304 Q8N814 137 aa1.72□□□□□ -2.13
TRAPPC13-209ENST00000508304 OR5AK2Q8NH90 309 aa1.72□□□□□ -2.13
TRAPPC13-209ENST00000508304 BORCS5Q969J3 196 aa1.72□□□□□ -2.13
TRAPPC13-209ENST00000508304 MED9Q9NWA0 146 aa1.72□□□□□ -2.13
TRAPPC13-209ENST00000508304 FBN3Q75N90 2809 aa1.72□□□□□ -2.13
TRAPPC13-209ENST00000508304 TNS3Q68CZ2 1445 aa1.72□□□□□ -2.13
TRAPPC13-209ENST00000508304 GBF1Q92538 1859 aa1.71□□□□□ -2.14
TRAPPC13-209ENST00000508304 PCDH15Q96QU1 1955 aa1.71□□□□□ -2.14
TRAPPC13-209ENST00000508304 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.71□□□□□ -2.14
TRAPPC13-209ENST00000508304 E7EUB6 86 aa1.71□□□□□ -2.14
TRAPPC13-209ENST00000508304 CXCL8P10145 99 aa1.71□□□□□ -2.14
TRAPPC13-209ENST00000508304 CRYGSP22914 178 aa1.71□□□□□ -2.14
TRAPPC13-209ENST00000508304 ZNF93P35789 620 aaPredicted RBP1.71□□□□□ -2.14
TRAPPC13-209ENST00000508304 CKS1BP61024 79 aa1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms