RNA–Protein interactions for RNA: ENST00000508071.1

CLDND1-217, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 556 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-217ENST00000508071 SYNGR2O43760 224 aa12.41□□□□□ -0.42
CLDND1-217ENST00000508071 RLN2P04090 185 aa12.41□□□□□ -0.42
CLDND1-217ENST00000508071 IL5P05113 134 aa12.41□□□□□ -0.42
CLDND1-217ENST00000508071 HOXA5P20719 270 aa12.41□□□□□ -0.42
CLDND1-217ENST00000508071 SPANXN5Q5MJ07 72 aa12.41□□□□□ -0.42
CLDND1-217ENST00000508071 CYP2G1PQ6ZSU1 146 aa12.41□□□□□ -0.42
CLDND1-217ENST00000508071 ACOT7LQ6ZUV0 252 aa12.41□□□□□ -0.42
CLDND1-217ENST00000508071 LINC00612Q8N6U2 182 aa12.41□□□□□ -0.42
CLDND1-217ENST00000508071 RPUSD4Q96CM3 377 aaKnown RBP12.41□□□□□ -0.42
CLDND1-217ENST00000508071 C20orf144Q9BQM9 153 aa12.41□□□□□ -0.42
CLDND1-217ENST00000508071 GAGE12BA1L429 117 aa12.4□□□□□ -0.42
CLDND1-217ENST00000508071 SMCO3A2RU48 225 aa12.4□□□□□ -0.42
CLDND1-217ENST00000508071 EREGO14944 169 aa12.4□□□□□ -0.42
CLDND1-217ENST00000508071 GAGE7O76087 117 aa12.4□□□□□ -0.42
CLDND1-217ENST00000508071 OR5G3P0C626 314 aa12.4□□□□□ -0.42
CLDND1-217ENST00000508071 GAGE12FP0CL80 117 aa12.4□□□□□ -0.42
CLDND1-217ENST00000508071 GAGE12GP0CL81 117 aa12.4□□□□□ -0.42
CLDND1-217ENST00000508071 GAGE12IP0CL82 117 aa12.4□□□□□ -0.42
CLDND1-217ENST00000508071 PRB4P10163 310 aaPredicted RBP12.4□□□□□ -0.42
CLDND1-217ENST00000508071 LINC00315P59091 139 aa12.4□□□□□ -0.42
CLDND1-217ENST00000508071 TMED4Q7Z7H5 227 aa12.4□□□□□ -0.42
CLDND1-217ENST00000508071 S100A7AQ86SG5 101 aa12.4□□□□□ -0.42
CLDND1-217ENST00000508071 PGPEP1Q9NXJ5 209 aa12.4□□□□□ -0.42
CLDND1-217ENST00000508071 STRAPQ9Y3F4 350 aaKnown RBP12.4□□□□□ -0.42
CLDND1-217ENST00000508071 SNURFLB1AK76 121 aa12.39□□□□□ -0.43
CLDND1-217ENST00000508071 H3BP45 60 aa12.38□□□□□ -0.43
CLDND1-217ENST00000508071 LINC00869P0C866 280 aa12.38□□□□□ -0.43
CLDND1-217ENST00000508071 VAMP1P23763 118 aa12.38□□□□□ -0.43
CLDND1-217ENST00000508071 TMEM128Q5BJH2 165 aa12.38□□□□□ -0.43
CLDND1-217ENST00000508071 LYPD1Q8N2G4 141 aa12.38□□□□□ -0.43
CLDND1-217ENST00000508071 LRTM2Q8N967 370 aa12.38□□□□□ -0.43
CLDND1-217ENST00000508071 MYCBP2O75592 4640 aa12.37□□□□□ -0.43
CLDND1-217ENST00000508071 ANXA7P20073 488 aaKnown RBP12.37□□□□□ -0.43
CLDND1-217ENST00000508071 PLP1P60201 277 aa12.37□□□□□ -0.43
CLDND1-217ENST00000508071 SELENOTP62341 195 aa12.37□□□□□ -0.43
CLDND1-217ENST00000508071 KIR3DS1Q14943 382 aa12.37□□□□□ -0.43
CLDND1-217ENST00000508071 RSL24D1Q9UHA3 163 aaKnown RBP12.37□□□□□ -0.43
CLDND1-217ENST00000508071 RNF24Q9Y225 148 aa12.37□□□□□ -0.43
CLDND1-217ENST00000508071 CXCL2P19875 107 aa12.36□□□□□ -0.43
CLDND1-217ENST00000508071 ERVFC1-1P60608 527 aa12.36□□□□□ -0.43
CLDND1-217ENST00000508071 Q5VSD8 79 aa12.36□□□□□ -0.43
CLDND1-217ENST00000508071 GFI1BQ5VTD9 330 aa12.36□□□□□ -0.43
CLDND1-217ENST00000508071 CDPF1Q6NVV7 123 aa12.36□□□□□ -0.43
CLDND1-217ENST00000508071 Q6ZRN7 208 aaPredicted RBP12.36□□□□□ -0.43
CLDND1-217ENST00000508071 CCDC190Q86UF4 302 aa12.36□□□□□ -0.43
CLDND1-217ENST00000508071 FRZBQ92765 325 aa12.36□□□□□ -0.43
CLDND1-217ENST00000508071 PARD6GQ9BYG4 376 aaPredicted RBP12.36□□□□□ -0.43
CLDND1-217ENST00000508071 PMS2P5A8MQ11 134 aa12.35□□□□□ -0.43
CLDND1-217ENST00000508071 SIVA1O15304 175 aa12.35□□□□□ -0.43
CLDND1-217ENST00000508071 HOXB5P09067 269 aa12.35□□□□□ -0.43
CLDND1-217ENST00000508071 FAUP35544 74 aaKnown RBP12.35□□□□□ -0.43
CLDND1-217ENST00000508071 FUSP35637 526 aaKnown RBP eCLIP12.35□□□□□ -0.43
CLDND1-217ENST00000508071 XGP55808 180 aa12.35□□□□□ -0.43
CLDND1-217ENST00000508071 SPCS2Q15005 226 aa12.35□□□□□ -0.43
CLDND1-217ENST00000508071 LCN15Q6UWW0 184 aa12.35□□□□□ -0.43
CLDND1-217ENST00000508071 TMPRSS5Q9H3S3 457 aa12.35□□□□□ -0.43
CLDND1-217ENST00000508071 VPS13BQ7Z7G8 4022 aa12.35□□□□□ -0.43
CLDND1-217ENST00000508071 SRRM2Q9UQ35 2752 aaKnown RBP12.35□□□□□ -0.43
CLDND1-217ENST00000508071 A0A096LPF7 62 aa12.34□□□□□ -0.43
CLDND1-217ENST00000508071 SLC50A1Q9BRV3 221 aa12.34□□□□□ -0.43
CLDND1-217ENST00000508071 ARL6Q9H0F7 186 aa12.34□□□□□ -0.43
CLDND1-217ENST00000508071 ZNF331Q9NQX6 463 aaPredicted RBP12.34□□□□□ -0.43
CLDND1-217ENST00000508071 FLG2Q5D862 2391 aaPredicted RBP12.34□□□□□ -0.43
CLDND1-217ENST00000508071 J3KRW8 73 aa12.33□□□□□ -0.44
CLDND1-217ENST00000508071 MRPS12O15235 138 aaKnown RBP12.33□□□□□ -0.44
CLDND1-217ENST00000508071 SFT2D2O95562 160 aa12.33□□□□□ -0.44
CLDND1-217ENST00000508071 PATE2Q6UY27 113 aa12.33□□□□□ -0.44
CLDND1-217ENST00000508071 Q6ZTI0 123 aa12.33□□□□□ -0.44
CLDND1-217ENST00000508071 VSIG2Q96IQ7 327 aa12.33□□□□□ -0.44
CLDND1-217ENST00000508071 ARV1Q9H2C2 271 aa12.33□□□□□ -0.44
CLDND1-217ENST00000508071 TRGV2A0A075B6R0 118 aa12.32□□□□□ -0.44
CLDND1-217ENST00000508071 IFNA5P01569 189 aa12.32□□□□□ -0.44
CLDND1-217ENST00000508071 SNRPCP09234 159 aaKnown RBP12.32□□□□□ -0.44
CLDND1-217ENST00000508071 SMIM18P0DKX4 95 aa12.32□□□□□ -0.44
CLDND1-217ENST00000508071 RRAS2P62070 204 aaPredicted RBP12.32□□□□□ -0.44
CLDND1-217ENST00000508071 DAZ2Q13117 558 aaKnown RBP12.32□□□□□ -0.44
CLDND1-217ENST00000508071 PSENENQ9NZ42 101 aa12.32□□□□□ -0.44
CLDND1-217ENST00000508071 TRAV12-3A0A0B4J271 114 aa12.31□□□□□ -0.44
CLDND1-217ENST00000508071 PRAC2D3DTV9 90 aa12.31□□□□□ -0.44
CLDND1-217ENST00000508071 LEPP41159 167 aa12.31□□□□□ -0.44
CLDND1-217ENST00000508071 PPP1R1AQ13522 171 aa12.31□□□□□ -0.44
CLDND1-217ENST00000508071 PYGO2Q9BRQ0 406 aa12.31□□□□□ -0.44
CLDND1-217ENST00000508071 CCDC59Q9P031 241 aaKnown RBP12.31□□□□□ -0.44
CLDND1-217ENST00000508071 FABP12A6NFH5 140 aa12.3□□□□□ -0.44
CLDND1-217ENST00000508071 NXPH4O95158 308 aa12.3□□□□□ -0.44
CLDND1-217ENST00000508071 POLR2GP62487 172 aaKnown RBP eCLIP12.3□□□□□ -0.44
CLDND1-217ENST00000508071 PXDC1Q5TGL8 231 aa12.3□□□□□ -0.44
CLDND1-217ENST00000508071 LINC00305Q7Z4B0 112 aa12.3□□□□□ -0.44
CLDND1-217ENST00000508071 BPIFA4PQ86YQ2 179 aa12.3□□□□□ -0.44
CLDND1-217ENST00000508071 NPVFQ9HCQ7 196 aa12.3□□□□□ -0.44
CLDND1-217ENST00000508071 K7EPK0 472 aa12.29□□□□□ -0.44
CLDND1-217ENST00000508071 AP3S2P59780 193 aa12.29□□□□□ -0.44
CLDND1-217ENST00000508071 ID3Q02535 119 aa12.29□□□□□ -0.44
CLDND1-217ENST00000508071 SLC38A11Q08AI6 406 aa12.29□□□□□ -0.44
CLDND1-217ENST00000508071 TEPPQ6URK8 271 aa12.29□□□□□ -0.44
CLDND1-217ENST00000508071 NFE4Q86UQ8 179 aa12.29□□□□□ -0.44
CLDND1-217ENST00000508071 SLC25A21Q9BQT8 299 aaPredicted RBP12.29□□□□□ -0.44
CLDND1-217ENST00000508071 MGAT4CQ9UBM8 478 aa12.29□□□□□ -0.44
CLDND1-217ENST00000508071 PXMP4Q9Y6I8 212 aa12.29□□□□□ -0.44
CLDND1-217ENST00000508071 FNDC10F2Z333 226 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms