RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 OR8I2Q8N0Y5 310 aa16.52■□□□□ 0.24
UBE2D3-216ENST00000503742 CLPSL1A2RUU4 121 aa16.51■□□□□ 0.23
UBE2D3-216ENST00000503742 ZNF705GA8MUZ8 300 aaPredicted RBP16.51■□□□□ 0.23
UBE2D3-216ENST00000503742 TRGV3P03979 118 aa16.51■□□□□ 0.23
UBE2D3-216ENST00000503742 COA6Q5JTJ3 125 aaKnown RBP16.51■□□□□ 0.23
UBE2D3-216ENST00000503742 PRSS57Q6UWY2 283 aa16.51■□□□□ 0.23
UBE2D3-216ENST00000503742 GOLT1AQ6ZVE7 132 aa16.51■□□□□ 0.23
UBE2D3-216ENST00000503742 NUDT10Q8NFP7 164 aa16.51■□□□□ 0.23
UBE2D3-216ENST00000503742 NUDT11Q96G61 164 aa16.51■□□□□ 0.23
UBE2D3-216ENST00000503742 NOL4LQ96MY1 436 aaPredicted RBP16.51■□□□□ 0.23
UBE2D3-216ENST00000503742 GNB4Q9HAV0 340 aa16.51■□□□□ 0.23
UBE2D3-216ENST00000503742 ABCA12Q86UK0 2595 aa16.51■□□□□ 0.23
UBE2D3-216ENST00000503742 IGHV3OR16-8A0A075B7F1 116 aa16.51■□□□□ 0.23
UBE2D3-216ENST00000503742 PLA2G2AP14555 144 aa16.51■□□□□ 0.23
UBE2D3-216ENST00000503742 GFI1BQ5VTD9 330 aa16.51■□□□□ 0.23
UBE2D3-216ENST00000503742 Q86TA4 180 aa16.51■□□□□ 0.23
UBE2D3-216ENST00000503742 LINC00469Q8N7U9 141 aa16.51■□□□□ 0.23
UBE2D3-216ENST00000503742 OR5R1Q8NH85 324 aa16.51■□□□□ 0.23
UBE2D3-216ENST00000503742 PRDM13Q9H4Q3 707 aa16.51■□□□□ 0.23
UBE2D3-216ENST00000503742 SMAD5-AS1Q9Y6J3 95 aa16.51■□□□□ 0.23
UBE2D3-216ENST00000503742 NAV2Q8IVL1 2488 aa16.51■□□□□ 0.23
UBE2D3-216ENST00000503742 CHD6Q8TD26 2715 aa16.5■□□□□ 0.23
UBE2D3-216ENST00000503742 TRAV8-1A0A0A6YYK1 113 aa16.5■□□□□ 0.23
UBE2D3-216ENST00000503742 IGHV4-59P01825 116 aa16.5■□□□□ 0.23
UBE2D3-216ENST00000503742 FABP4P15090 132 aa16.5■□□□□ 0.23
UBE2D3-216ENST00000503742 PACRGQ96M98 296 aaPredicted RBP16.5■□□□□ 0.23
UBE2D3-216ENST00000503742 SERTAD4Q9NUC0 356 aa16.5■□□□□ 0.23
UBE2D3-216ENST00000503742 TRAPPC1Q9Y5R8 145 aa16.5■□□□□ 0.23
UBE2D3-216ENST00000503742 PRRC2AP48634 2157 aaKnown RBP16.5■□□□□ 0.23
UBE2D3-216ENST00000503742 IER3P46695 156 aa16.49■□□□□ 0.23
UBE2D3-216ENST00000503742 DEFA6Q01524 100 aa16.49■□□□□ 0.23
UBE2D3-216ENST00000503742 RELQ04864 619 aaPredicted RBP16.49■□□□□ 0.23
UBE2D3-216ENST00000503742 TMEM75Q8N9X5 138 aa16.49■□□□□ 0.23
UBE2D3-216ENST00000503742 Q96MF0 132 aa16.49■□□□□ 0.23
UBE2D3-216ENST00000503742 ZNF580Q9UK33 172 aa16.49■□□□□ 0.23
UBE2D3-216ENST00000503742 BUB3O43684 328 aa16.49■□□□□ 0.23
UBE2D3-216ENST00000503742 RAB9AP51151 201 aa16.49■□□□□ 0.23
UBE2D3-216ENST00000503742 PSG9Q00887 426 aa16.49■□□□□ 0.23
UBE2D3-216ENST00000503742 C9orf139Q6ZV77 190 aa16.49■□□□□ 0.23
UBE2D3-216ENST00000503742 HIST1H2BLQ99880 126 aa16.49■□□□□ 0.23
UBE2D3-216ENST00000503742 NBPF19A0A087WUL8 3843 aa16.48■□□□□ 0.23
UBE2D3-216ENST00000503742 DIRC3C9JPN6 131 aa16.48■□□□□ 0.23
UBE2D3-216ENST00000503742 TPPP2P59282 170 aa16.48■□□□□ 0.23
UBE2D3-216ENST00000503742 PRR27Q6MZM9 219 aa16.48■□□□□ 0.23
UBE2D3-216ENST00000503742 GRAMD2BQ96HH9 432 aa16.48■□□□□ 0.23
UBE2D3-216ENST00000503742 ZNF492Q9P255 531 aa16.48■□□□□ 0.23
UBE2D3-216ENST00000503742 APCP25054 2843 aa16.48■□□□□ 0.23
UBE2D3-216ENST00000503742 M0R3E3 92 aa16.47■□□□□ 0.23
UBE2D3-216ENST00000503742 ZNF253O75346 499 aa16.47■□□□□ 0.23
UBE2D3-216ENST00000503742 CA1P00915 261 aaPredicted RBP16.47■□□□□ 0.23
UBE2D3-216ENST00000503742 PKIAP61925 76 aa16.47■□□□□ 0.23
UBE2D3-216ENST00000503742 CFHR3Q02985 330 aa16.47■□□□□ 0.23
UBE2D3-216ENST00000503742 PDZD11Q5EBL8 140 aa16.47■□□□□ 0.23
UBE2D3-216ENST00000503742 LINC00322Q6ZN03 302 aaPredicted RBP16.47■□□□□ 0.23
UBE2D3-216ENST00000503742 USMG5Q96IX5 58 aa16.47■□□□□ 0.23
UBE2D3-216ENST00000503742 PRSS22Q9GZN4 317 aa16.47■□□□□ 0.23
UBE2D3-216ENST00000503742 AAMDCQ9H7C9 122 aa16.47■□□□□ 0.23
UBE2D3-216ENST00000503742 ZANQ9Y493 2812 aa16.47■□□□□ 0.23
UBE2D3-216ENST00000503742 C19orf71A6NCJ1 209 aa16.47■□□□□ 0.23
UBE2D3-216ENST00000503742 TSTD3H0UI37 97 aa16.47■□□□□ 0.23
UBE2D3-216ENST00000503742 IGLV1-40P01703 118 aa16.47■□□□□ 0.23
UBE2D3-216ENST00000503742 J3QKU1 62 aa16.46■□□□□ 0.23
UBE2D3-216ENST00000503742 FRMD6-AS1P0C7T7 363 aa16.46■□□□□ 0.23
UBE2D3-216ENST00000503742 TCL1AP56279 114 aa16.46■□□□□ 0.23
UBE2D3-216ENST00000503742 TENM4Q6N022 2769 aa16.46■□□□□ 0.23
UBE2D3-216ENST00000503742 PRNTQ86SH4 94 aa16.46■□□□□ 0.23
UBE2D3-216ENST00000503742 ARL6IP6Q8N6S5 226 aa16.46■□□□□ 0.23
UBE2D3-216ENST00000503742 PSMG3-AS1Q96PY0 264 aa16.46■□□□□ 0.23
UBE2D3-216ENST00000503742 K7EQM0 130 aa16.46■□□□□ 0.22
UBE2D3-216ENST00000503742 PSG3Q16557 428 aa16.46■□□□□ 0.22
UBE2D3-216ENST00000503742 KLK15Q9H2R5 256 aa16.46■□□□□ 0.22
UBE2D3-216ENST00000503742 U3KQE9 123 aa16.46■□□□□ 0.22
UBE2D3-216ENST00000503742 DOPEY2Q9Y3R5 2298 aa16.45■□□□□ 0.22
UBE2D3-216ENST00000503742 A0A087X0K7 114 aa16.45■□□□□ 0.22
UBE2D3-216ENST00000503742 CBLN1P23435 193 aa16.45■□□□□ 0.22
UBE2D3-216ENST00000503742 IZUMO1RA6ND01 250 aa16.44■□□□□ 0.22
UBE2D3-216ENST00000503742 RPL19P84098 196 aaKnown RBP16.44■□□□□ 0.22
UBE2D3-216ENST00000503742 JOSD1Q15040 202 aaPredicted RBP16.44■□□□□ 0.22
UBE2D3-216ENST00000503742 C1orf194Q5T5A4 169 aa16.44■□□□□ 0.22
UBE2D3-216ENST00000503742 METTL26Q96S19 204 aa16.44■□□□□ 0.22
UBE2D3-216ENST00000503742 GNB1LQ9BYB4 327 aa16.44■□□□□ 0.22
UBE2D3-216ENST00000503742 PSG8Q9UQ74 426 aa16.44■□□□□ 0.22
UBE2D3-216ENST00000503742 ZFP30Q9Y2G7 519 aa16.44■□□□□ 0.22
UBE2D3-216ENST00000503742 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.44■□□□□ 0.22
UBE2D3-216ENST00000503742 SERTM2A0A1B0GWG4 89 aa16.44■□□□□ 0.22
UBE2D3-216ENST00000503742 ARL3P36405 182 aa16.44■□□□□ 0.22
UBE2D3-216ENST00000503742 CDPF1Q6NVV7 123 aa16.44■□□□□ 0.22
UBE2D3-216ENST00000503742 Q71RC1 249 aaPredicted RBP16.44■□□□□ 0.22
UBE2D3-216ENST00000503742 CIARTQ8N365 385 aaPredicted RBP16.44■□□□□ 0.22
UBE2D3-216ENST00000503742 TSKUQ8WUA8 353 aa16.44■□□□□ 0.22
UBE2D3-216ENST00000503742 XKRY2A2RUG3 117 aa16.43■□□□□ 0.22
UBE2D3-216ENST00000503742 ZNF785A8K8V0 405 aa16.43■□□□□ 0.22
UBE2D3-216ENST00000503742 TRBV12-3P01733 135 aa16.43■□□□□ 0.22
UBE2D3-216ENST00000503742 IGHG4P01861 327 aa16.43■□□□□ 0.22
UBE2D3-216ENST00000503742 CT83Q5H943 113 aa16.43■□□□□ 0.22
UBE2D3-216ENST00000503742 Q6YL49 198 aa16.43■□□□□ 0.22
UBE2D3-216ENST00000503742 ZNF331Q9NQX6 463 aaPredicted RBP16.43■□□□□ 0.22
UBE2D3-216ENST00000503742 APOHP02749 345 aaPredicted RBP16.42■□□□□ 0.22
UBE2D3-216ENST00000503742 PF4V1P10720 104 aa16.42■□□□□ 0.22
UBE2D3-216ENST00000503742 CSN1S1P47710 185 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms