RNA–Protein interactions for RNA: ENST00000497597.5

TRAPPC12-223, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 3,401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-223ENST00000497597 DLX1P56177 255 aa8.52□□□□□ -1.05
TRAPPC12-223ENST00000497597 C3orf36Q3SXR2 165 aa8.52□□□□□ -1.05
TRAPPC12-223ENST00000497597 CYSLTR1Q9Y271 337 aa8.52□□□□□ -1.05
TRAPPC12-223ENST00000497597 UFC1Q9Y3C8 167 aa8.52□□□□□ -1.05
TRAPPC12-223ENST00000497597 DOPEY2Q9Y3R5 2298 aa8.52□□□□□ -1.05
TRAPPC12-223ENST00000497597 TMEM238LA0A1B0GVL6 79 aa8.52□□□□□ -1.05
TRAPPC12-223ENST00000497597 CECR9P0C854 216 aa8.52□□□□□ -1.05
TRAPPC12-223ENST00000497597 SCGB1C2P0DMR2 95 aa8.52□□□□□ -1.05
TRAPPC12-223ENST00000497597 WT1-ASQ06250 92 aa8.52□□□□□ -1.05
TRAPPC12-223ENST00000497597 IGFL4Q6B9Z1 124 aa8.52□□□□□ -1.05
TRAPPC12-223ENST00000497597 ZCCHC24Q8N2G6 241 aaKnown RBP8.52□□□□□ -1.05
TRAPPC12-223ENST00000497597 TMEM178AQ8NBL3 297 aa8.52□□□□□ -1.05
TRAPPC12-223ENST00000497597 ANAPC13Q9BS18 74 aa8.52□□□□□ -1.05
TRAPPC12-223ENST00000497597 HIGD1AQ9Y241 93 aa8.52□□□□□ -1.05
TRAPPC12-223ENST00000497597 ADAMTS20P59510 1910 aa8.51□□□□□ -1.05
TRAPPC12-223ENST00000497597 B5MCH6 92 aa8.51□□□□□ -1.05
TRAPPC12-223ENST00000497597 LOXL3P58215 753 aa8.51□□□□□ -1.05
TRAPPC12-223ENST00000497597 C2orf83Q53S99 150 aa8.51□□□□□ -1.05
TRAPPC12-223ENST00000497597 ATP1A1-AS1Q5TC04 95 aa8.51□□□□□ -1.05
TRAPPC12-223ENST00000497597 SCGB1D4Q6XE38 83 aa8.51□□□□□ -1.05
TRAPPC12-223ENST00000497597 FMC1Q96HJ9 113 aa8.51□□□□□ -1.05
TRAPPC12-223ENST00000497597 ZNF48Q96MX3 618 aaPredicted RBP8.51□□□□□ -1.05
TRAPPC12-223ENST00000497597 MRPL16Q9NX20 251 aaKnown RBP8.51□□□□□ -1.05
TRAPPC12-223ENST00000497597 NPYP01303 97 aa8.51□□□□□ -1.05
TRAPPC12-223ENST00000497597 FGF6P10767 208 aa8.51□□□□□ -1.05
TRAPPC12-223ENST00000497597 DIAPH2-AS1Q14236 149 aa8.51□□□□□ -1.05
TRAPPC12-223ENST00000497597 RNFT1Q5M7Z0 435 aa8.51□□□□□ -1.05
TRAPPC12-223ENST00000497597 Q86TA4 180 aa8.51□□□□□ -1.05
TRAPPC12-223ENST00000497597 GCSAMQ8N6F7 178 aa8.51□□□□□ -1.05
TRAPPC12-223ENST00000497597 TPSG1Q9NRR2 321 aa8.51□□□□□ -1.05
TRAPPC12-223ENST00000497597 SOX21Q9Y651 276 aaPredicted RBP8.51□□□□□ -1.05
TRAPPC12-223ENST00000497597 FAM90A9PA6NNJ1 464 aa8.51□□□□□ -1.05
TRAPPC12-223ENST00000497597 C9orf172C9J069 976 aa8.51□□□□□ -1.05
TRAPPC12-223ENST00000497597 SRSF9Q13242 221 aaKnown RBP eCLIP8.51□□□□□ -1.054e-7■■■□□ 16.1
TRAPPC12-223ENST00000497597 C6orf15Q6UXA7 325 aaPredicted RBP8.51□□□□□ -1.05
TRAPPC12-223ENST00000497597 TTC9CQ8N5M4 171 aa8.51□□□□□ -1.05
TRAPPC12-223ENST00000497597 MRAP2Q96G30 205 aa8.51□□□□□ -1.05
TRAPPC12-223ENST00000497597 TRAV40A0A0B4J280 105 aa8.5□□□□□ -1.05
TRAPPC12-223ENST00000497597 J3KRW8 73 aa8.5□□□□□ -1.05
TRAPPC12-223ENST00000497597 CCL8P80075 99 aa8.5□□□□□ -1.05
TRAPPC12-223ENST00000497597 Q8TAT8 98 aa8.5□□□□□ -1.05
TRAPPC12-223ENST00000497597 C8orf49Q96NF6 230 aa8.5□□□□□ -1.05
TRAPPC12-223ENST00000497597 NDUFS7O75251 213 aa8.5□□□□□ -1.05
TRAPPC12-223ENST00000497597 GATA1P15976 413 aaPredicted RBP8.5□□□□□ -1.05
TRAPPC12-223ENST00000497597 RNF183Q96D59 192 aa8.5□□□□□ -1.05
TRAPPC12-223ENST00000497597 PLSCR4Q9NRQ2 329 aa8.5□□□□□ -1.05
TRAPPC12-223ENST00000497597 TRBV25-1A0A075B6N4 114 aa8.5□□□□□ -1.05
TRAPPC12-223ENST00000497597 SS18L1O75177 396 aaPredicted RBP8.5□□□□□ -1.05
TRAPPC12-223ENST00000497597 MT-ATP8P03928 68 aa8.5□□□□□ -1.05
TRAPPC12-223ENST00000497597 C1orf122Q6ZSJ8 110 aa8.5□□□□□ -1.05
TRAPPC12-223ENST00000497597 TMEM75Q8N9X5 138 aa8.5□□□□□ -1.05
TRAPPC12-223ENST00000497597 SPANXB1Q9NS25 103 aaPredicted RBP8.5□□□□□ -1.05
TRAPPC12-223ENST00000497597 HIF1ANQ9NWT6 349 aa8.5□□□□□ -1.05
TRAPPC12-223ENST00000497597 PSG8Q9UQ74 426 aa8.5□□□□□ -1.05
TRAPPC12-223ENST00000497597 PTPRBP23467 1997 aa8.49□□□□□ -1.05
TRAPPC12-223ENST00000497597 CGB1A6NKQ9 187 aa8.49□□□□□ -1.05
TRAPPC12-223ENST00000497597 K7ESF4 209 aa8.49□□□□□ -1.05
TRAPPC12-223ENST00000497597 SLC25A48Q6ZT89 311 aaKnown RBP8.49□□□□□ -1.05
TRAPPC12-223ENST00000497597 SMRP1Q8NCR6 262 aa8.49□□□□□ -1.05
TRAPPC12-223ENST00000497597 CACNG8Q8WXS5 425 aa8.49□□□□□ -1.05
TRAPPC12-223ENST00000497597 ABHD17AQ96GS6 310 aa8.49□□□□□ -1.05
TRAPPC12-223ENST00000497597 ACACAQ13085 2346 aa8.49□□□□□ -1.05
TRAPPC12-223ENST00000497597 NPIPB5A8MRT5 1133 aa8.49□□□□□ -1.05
TRAPPC12-223ENST00000497597 KLRC4-KLRK1H3BQV0 150 aa8.49□□□□□ -1.05
TRAPPC12-223ENST00000497597 RUSC1-AS1Q66K80 236 aa8.49□□□□□ -1.05
TRAPPC12-223ENST00000497597 COL6A6A6NMZ7 2263 aa8.49□□□□□ -1.05
TRAPPC12-223ENST00000497597 IGLL5B9A064 214 aa8.48□□□□□ -1.05
TRAPPC12-223ENST00000497597 LGALS9BQ3B8N2 356 aa8.48□□□□□ -1.05
TRAPPC12-223ENST00000497597 MRPL51Q4U2R6 128 aaKnown RBP8.48□□□□□ -1.05
TRAPPC12-223ENST00000497597 LGALS9CQ6DKI2 356 aa8.48□□□□□ -1.05
TRAPPC12-223ENST00000497597 ZNF502Q8TBZ5 544 aa8.48□□□□□ -1.05
TRAPPC12-223ENST00000497597 ZNF714Q96N38 554 aa8.48□□□□□ -1.05
TRAPPC12-223ENST00000497597 PRR33A8MZF0 331 aa8.48□□□□□ -1.05
TRAPPC12-223ENST00000497597 IGKCP01834 107 aa8.48□□□□□ -1.05
TRAPPC12-223ENST00000497597 PRTN3P24158 256 aa8.48□□□□□ -1.05
TRAPPC12-223ENST00000497597 SAP25Q8TEE9 199 aa8.48□□□□□ -1.05
TRAPPC12-223ENST00000497597 RPEQ96AT9 228 aa8.48□□□□□ -1.05
TRAPPC12-223ENST00000497597 RASL11BQ9BPW5 248 aa8.48□□□□□ -1.05
TRAPPC12-223ENST00000497597 MAP1LC3AQ9H492 121 aa8.48□□□□□ -1.05
TRAPPC12-223ENST00000497597 RAB9BQ9NP90 201 aa8.48□□□□□ -1.05
TRAPPC12-223ENST00000497597 PGPEP1Q9NXJ5 209 aa8.48□□□□□ -1.05
TRAPPC12-223ENST00000497597 MSRB1Q9NZV6 116 aa8.48□□□□□ -1.05
TRAPPC12-223ENST00000497597 TMEM8BA6NDV4 472 aa8.48□□□□□ -1.05
TRAPPC12-223ENST00000497597 HAX1O00165 279 aa8.48□□□□□ -1.05
TRAPPC12-223ENST00000497597 C17orf58Q2M2W7 97 aa8.48□□□□□ -1.05
TRAPPC12-223ENST00000497597 PIEZO2Q9H5I5 2752 aa8.48□□□□□ -1.05
TRAPPC12-223ENST00000497597 TRBV20-1A0A075B6N2 111 aa8.47□□□□□ -1.05
TRAPPC12-223ENST00000497597 IGKV2-40A0A087WW87 121 aaPredicted RBP8.47□□□□□ -1.05
TRAPPC12-223ENST00000497597 IGKV2D-40P01614 121 aaPredicted RBP8.47□□□□□ -1.05
TRAPPC12-223ENST00000497597 VMA21Q3ZAQ7 101 aa8.47□□□□□ -1.05
TRAPPC12-223ENST00000497597 C3orf56Q8N813 242 aa8.47□□□□□ -1.05
TRAPPC12-223ENST00000497597 TMEM105Q8N8V8 129 aa8.47□□□□□ -1.05
TRAPPC12-223ENST00000497597 DDB2Q92466 427 aa8.47□□□□□ -1.05
TRAPPC12-223ENST00000497597 LAMA5O15230 3695 aa8.47□□□□□ -1.05
TRAPPC12-223ENST00000497597 ADGRG4Q8IZF6 3080 aa8.47□□□□□ -1.05
TRAPPC12-223ENST00000497597 IL4P05112 153 aa8.47□□□□□ -1.05
TRAPPC12-223ENST00000497597 C12orf74Q32Q52 190 aa8.47□□□□□ -1.05
TRAPPC12-223ENST00000497597 PIP4P2Q8N4L2 257 aa8.47□□□□□ -1.05
TRAPPC12-223ENST00000497597 OSR1Q8TAX0 266 aaPredicted RBP8.47□□□□□ -1.05
TRAPPC12-223ENST00000497597 TMEM158Q8WZ71 300 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms