RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 CAMPP49913 170 aa10.17□□□□□ -0.78
GARNL3-220ENST00000496711 DEFA6Q01524 100 aa10.17□□□□□ -0.78
GARNL3-220ENST00000496711 C16orf54Q6UWD8 224 aa10.17□□□□□ -0.78
GARNL3-220ENST00000496711 RBPMS2Q6ZRY4 209 aaKnown RBP10.17□□□□□ -0.78
GARNL3-220ENST00000496711 Q6ZWC4 215 aa10.17□□□□□ -0.78
GARNL3-220ENST00000496711 Q71RC1 249 aaPredicted RBP10.17□□□□□ -0.78
GARNL3-220ENST00000496711 ZC2HC1AQ96GY0 325 aa10.17□□□□□ -0.78
GARNL3-220ENST00000496711 RCHY1Q96PM5 261 aa10.17□□□□□ -0.78
GARNL3-220ENST00000496711 MOB4Q9Y3A3 225 aa10.17□□□□□ -0.78
GARNL3-220ENST00000496711 PAX1P15863 534 aa10.16□□□□□ -0.78
GARNL3-220ENST00000496711 ZNF664Q8N3J9 261 aa10.16□□□□□ -0.78
GARNL3-220ENST00000496711 IGHV3OR16-10A0A075B7F0 116 aa10.15□□□□□ -0.78
GARNL3-220ENST00000496711 SH2D7A6NKC9 451 aaPredicted RBP10.15□□□□□ -0.78
GARNL3-220ENST00000496711 G3V318 75 aa10.15□□□□□ -0.78
GARNL3-220ENST00000496711 CSN1S1P47710 185 aa10.15□□□□□ -0.78
GARNL3-220ENST00000496711 ATP5J2P56134 94 aa10.15□□□□□ -0.78
GARNL3-220ENST00000496711 FAM209BQ5JX69 171 aa10.15□□□□□ -0.78
GARNL3-220ENST00000496711 SIGLECL1Q8N7X8 197 aa10.15□□□□□ -0.78
GARNL3-220ENST00000496711 OR2D3Q8NGH3 330 aa10.15□□□□□ -0.78
GARNL3-220ENST00000496711 C18orf32Q8TCD1 76 aa10.15□□□□□ -0.78
GARNL3-220ENST00000496711 PGLYRP4Q96LB8 373 aa10.15□□□□□ -0.78
GARNL3-220ENST00000496711 NOL4LQ96MY1 436 aaPredicted RBP10.15□□□□□ -0.78
GARNL3-220ENST00000496711 SSBP4Q9BWG4 385 aaPredicted RBP10.15□□□□□ -0.78
GARNL3-220ENST00000496711 GPX1P07203 203 aa10.15□□□□□ -0.79
GARNL3-220ENST00000496711 TMEM219Q86XT9 240 aa10.15□□□□□ -0.79
GARNL3-220ENST00000496711 ARL6IP6Q8N6S5 226 aa10.15□□□□□ -0.79
GARNL3-220ENST00000496711 EEF1AKMT3Q96AZ1 226 aa10.15□□□□□ -0.79
GARNL3-220ENST00000496711 CCDC140Q96MF4 163 aa10.15□□□□□ -0.79
GARNL3-220ENST00000496711 ZFAND3Q9H8U3 227 aa10.15□□□□□ -0.79
GARNL3-220ENST00000496711 A0A1W2PS18 150 aa10.14□□□□□ -0.79
GARNL3-220ENST00000496711 LINC01548A6NM66 108 aa10.14□□□□□ -0.79
GARNL3-220ENST00000496711 AMTP48728 403 aa10.14□□□□□ -0.79
GARNL3-220ENST00000496711 KLF5Q13887 457 aaPredicted RBP10.14□□□□□ -0.79
GARNL3-220ENST00000496711 TOMM20LQ6UXN7 152 aa10.14□□□□□ -0.79
GARNL3-220ENST00000496711 BRD3OSQ6XYD6 125 aa10.14□□□□□ -0.79
GARNL3-220ENST00000496711 DOPEY1Q5JWR5 2465 aa10.14□□□□□ -0.79
GARNL3-220ENST00000496711 CFAP46Q8IYW2 2715 aa10.14□□□□□ -0.79
GARNL3-220ENST00000496711 IGSF10Q6WRI0 2623 aa10.14□□□□□ -0.79
GARNL3-220ENST00000496711 IGHV4-30-2A0A087WSY4 118 aa10.13□□□□□ -0.79
GARNL3-220ENST00000496711 ZNF785A8K8V0 405 aa10.13□□□□□ -0.79
GARNL3-220ENST00000496711 ZNF324O75467 553 aaPredicted RBP10.13□□□□□ -0.79
GARNL3-220ENST00000496711 PMCHP20382 165 aa10.13□□□□□ -0.79
GARNL3-220ENST00000496711 RAB9AP51151 201 aa10.13□□□□□ -0.79
GARNL3-220ENST00000496711 ASCL2Q99929 193 aa10.13□□□□□ -0.79
GARNL3-220ENST00000496711 ALKBH7Q9BT30 221 aaPredicted RBP10.13□□□□□ -0.79
GARNL3-220ENST00000496711 TRBV7-1A0A0A6YYK4 115 aa10.13□□□□□ -0.79
GARNL3-220ENST00000496711 IGHV3-35A0A0C4DH35 117 aa10.13□□□□□ -0.79
GARNL3-220ENST00000496711 FBLL1A6NHQ2 334 aaKnown RBP10.13□□□□□ -0.79
GARNL3-220ENST00000496711 ZNF705FA8MVS1 300 aaPredicted RBP10.13□□□□□ -0.79
GARNL3-220ENST00000496711 CLEC3BP05452 202 aa10.13□□□□□ -0.79
GARNL3-220ENST00000496711 ZNF705DP0CH99 300 aaPredicted RBP10.13□□□□□ -0.79
GARNL3-220ENST00000496711 ZNF705BP0CI00 300 aaPredicted RBP10.13□□□□□ -0.79
GARNL3-220ENST00000496711 RNF224P0DH78 156 aa10.13□□□□□ -0.79
GARNL3-220ENST00000496711 CT45A10P0DMU9 189 aa10.13□□□□□ -0.79
GARNL3-220ENST00000496711 PRB4P10163 310 aaPredicted RBP10.13□□□□□ -0.79
GARNL3-220ENST00000496711 SPOCK3Q9BQ16 436 aa10.13□□□□□ -0.79
GARNL3-220ENST00000496711 MEGF9Q9H1U4 602 aa10.13□□□□□ -0.79
GARNL3-220ENST00000496711 SMAD5-AS1Q9Y6J3 95 aa10.13□□□□□ -0.79
GARNL3-220ENST00000496711 IGHV3OR16-8A0A075B7F1 116 aa10.12□□□□□ -0.79
GARNL3-220ENST00000496711 TRAV41A0A0B4J266 112 aa10.12□□□□□ -0.79
GARNL3-220ENST00000496711 A8MWP6 167 aa10.12□□□□□ -0.79
GARNL3-220ENST00000496711 CD33P20138 364 aa10.12□□□□□ -0.79
GARNL3-220ENST00000496711 CRIP2P52943 208 aaPredicted RBP10.12□□□□□ -0.79
GARNL3-220ENST00000496711 FOXA3P55318 350 aaPredicted RBP10.12□□□□□ -0.79
GARNL3-220ENST00000496711 CLEC19AQ6UXS0 136 aa10.12□□□□□ -0.79
GARNL3-220ENST00000496711 REC114Q7Z4M0 266 aa10.12□□□□□ -0.79
GARNL3-220ENST00000496711 PIFOQ8TCI5 191 aa10.12□□□□□ -0.79
GARNL3-220ENST00000496711 C8orf49Q96NF6 230 aa10.12□□□□□ -0.79
GARNL3-220ENST00000496711 NRN1Q9NPD7 142 aa10.12□□□□□ -0.79
GARNL3-220ENST00000496711 IGKV2-40A0A087WW87 121 aaPredicted RBP10.11□□□□□ -0.79
GARNL3-220ENST00000496711 A0A087X0K7 114 aa10.11□□□□□ -0.79
GARNL3-220ENST00000496711 HAX1O00165 279 aa10.11□□□□□ -0.79
GARNL3-220ENST00000496711 CHEK1O14757 476 aa10.11□□□□□ -0.79
GARNL3-220ENST00000496711 IGKV2D-40P01614 121 aaPredicted RBP10.11□□□□□ -0.79
GARNL3-220ENST00000496711 APOHP02749 345 aaPredicted RBP10.11□□□□□ -0.79
GARNL3-220ENST00000496711 IGHV4-38-2P0DP08 117 aa10.11□□□□□ -0.79
GARNL3-220ENST00000496711 C19orf54Q5BKX5 351 aa10.11□□□□□ -0.79
GARNL3-220ENST00000496711 C14orf144Q96I85 54 aa10.11□□□□□ -0.79
GARNL3-220ENST00000496711 CACNA1BQ00975 2339 aa10.11□□□□□ -0.79
GARNL3-220ENST00000496711 KIR2DL5BA0A0G2JN68 375 aa10.1□□□□□ -0.79
GARNL3-220ENST00000496711 KIR2DL5BA0A0G2JPC4 375 aa10.1□□□□□ -0.79
GARNL3-220ENST00000496711 MSMBP08118 114 aa10.1□□□□□ -0.79
GARNL3-220ENST00000496711 CRIP1P50238 77 aa10.1□□□□□ -0.79
GARNL3-220ENST00000496711 Q6AWC8 147 aa10.1□□□□□ -0.79
GARNL3-220ENST00000496711 KIR2DL5AQ8N109 375 aa10.1□□□□□ -0.79
GARNL3-220ENST00000496711 RNF114Q9Y508 228 aa10.1□□□□□ -0.79
GARNL3-220ENST00000496711 FAM223BA6NKX1 122 aa10.1□□□□□ -0.79
GARNL3-220ENST00000496711 BUB3O43684 328 aa10.1□□□□□ -0.79
GARNL3-220ENST00000496711 KRTDAPP60985 99 aa10.1□□□□□ -0.79
GARNL3-220ENST00000496711 RELQ04864 619 aaPredicted RBP10.1□□□□□ -0.79
GARNL3-220ENST00000496711 ATP5G2Q06055 141 aa10.1□□□□□ -0.79
GARNL3-220ENST00000496711 SAPCD1Q5SSQ6 148 aa10.1□□□□□ -0.79
GARNL3-220ENST00000496711 C1orf194Q5T5A4 169 aa10.1□□□□□ -0.79
GARNL3-220ENST00000496711 TEX43Q6ZNM6 134 aa10.1□□□□□ -0.79
GARNL3-220ENST00000496711 COX8CQ7Z4L0 72 aa10.1□□□□□ -0.79
GARNL3-220ENST00000496711 FAM223AQ8IWN6 122 aa10.1□□□□□ -0.79
GARNL3-220ENST00000496711 ATP6V0BQ99437 205 aa10.1□□□□□ -0.79
GARNL3-220ENST00000496711 ASH1LQ9NR48 2969 aaKnown RBP10.1□□□□□ -0.79
GARNL3-220ENST00000496711 A0A1B0GUT8 65 aa10.09□□□□□ -0.79
GARNL3-220ENST00000496711 CLPSL1A2RUU4 121 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 125.1 ms