RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 B5MCH6 92 aa7.26□□□□□ -1.25
HPS4-217ENST00000496385 COL8A1P27658 744 aa7.26□□□□□ -1.25
HPS4-217ENST00000496385 ARL3P36405 182 aa7.26□□□□□ -1.25
HPS4-217ENST00000496385 PAX8Q06710 450 aa7.26□□□□□ -1.25
HPS4-217ENST00000496385 LINC00322Q6ZN03 302 aaPredicted RBP7.26□□□□□ -1.25
HPS4-217ENST00000496385 TMEM178AQ8NBL3 297 aa7.26□□□□□ -1.25
HPS4-217ENST00000496385 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.26□□□□□ -1.25
HPS4-217ENST00000496385 HARBI1Q96MB7 349 aa7.26□□□□□ -1.25
HPS4-217ENST00000496385 PROK2Q9HC23 129 aa7.26□□□□□ -1.25
HPS4-217ENST00000496385 GAGE12JA6NER3 117 aa7.26□□□□□ -1.25
HPS4-217ENST00000496385 CXCL13O43927 109 aa7.26□□□□□ -1.25
HPS4-217ENST00000496385 MRPL33O75394 65 aaKnown RBP7.26□□□□□ -1.25
HPS4-217ENST00000496385 GAGE7O76087 117 aa7.26□□□□□ -1.25
HPS4-217ENST00000496385 GAGE12FP0CL80 117 aa7.26□□□□□ -1.25
HPS4-217ENST00000496385 GAGE12GP0CL81 117 aa7.26□□□□□ -1.25
HPS4-217ENST00000496385 GAGE12IP0CL82 117 aa7.26□□□□□ -1.25
HPS4-217ENST00000496385 IFI27P40305 119 aaPredicted RBP7.26□□□□□ -1.25
HPS4-217ENST00000496385 GAGE4Q13068 117 aa7.26□□□□□ -1.25
HPS4-217ENST00000496385 KLF17Q5JT82 389 aaPredicted RBP7.26□□□□□ -1.25
HPS4-217ENST00000496385 ZNF562Q6V9R5 426 aa7.26□□□□□ -1.25
HPS4-217ENST00000496385 KLF13Q9Y2Y9 288 aaPredicted RBP7.26□□□□□ -1.25
HPS4-217ENST00000496385 TRAV5A0A0B4J249 113 aa7.25□□□□□ -1.25
HPS4-217ENST00000496385 C15orf65H3BRN8 121 aa7.25□□□□□ -1.25
HPS4-217ENST00000496385 K7ERJ3 54 aa7.25□□□□□ -1.25
HPS4-217ENST00000496385 OVOL3O00110 214 aa7.25□□□□□ -1.25
HPS4-217ENST00000496385 CEACAM4O75871 244 aa7.25□□□□□ -1.25
HPS4-217ENST00000496385 LYRM7Q5U5X0 104 aa7.25□□□□□ -1.25
HPS4-217ENST00000496385 DLX4Q92988 240 aaPredicted RBP7.25□□□□□ -1.25
HPS4-217ENST00000496385 PGPA6NDG6 321 aa7.25□□□□□ -1.25
HPS4-217ENST00000496385 NDUFS7O75251 213 aa7.25□□□□□ -1.25
HPS4-217ENST00000496385 PYYP10082 97 aa7.25□□□□□ -1.25
HPS4-217ENST00000496385 COL8A2P25067 703 aa7.25□□□□□ -1.25
HPS4-217ENST00000496385 LINC00205P59089 165 aa7.25□□□□□ -1.25
HPS4-217ENST00000496385 TM4SF20Q53R12 229 aa7.25□□□□□ -1.25
HPS4-217ENST00000496385 ASPHD1Q5U4P2 390 aa7.25□□□□□ -1.25
HPS4-217ENST00000496385 WDR86Q86TI4 376 aa7.25□□□□□ -1.25
HPS4-217ENST00000496385 MOGAT3Q86VF5 341 aa7.25□□□□□ -1.25
HPS4-217ENST00000496385 FAM90A1Q86YD7 464 aa7.25□□□□□ -1.25
HPS4-217ENST00000496385 OSR1Q8TAX0 266 aaPredicted RBP7.25□□□□□ -1.25
HPS4-217ENST00000496385 TMEM158Q8WZ71 300 aa7.25□□□□□ -1.25
HPS4-217ENST00000496385 HHLA3Q9XRX5 114 aa7.25□□□□□ -1.25
HPS4-217ENST00000496385 COL12A1Q99715 3063 aa7.25□□□□□ -1.25
HPS4-217ENST00000496385 INS-IGF2F8WCM5 200 aa7.25□□□□□ -1.25
HPS4-217ENST00000496385 RHODO00212 210 aa7.25□□□□□ -1.25
HPS4-217ENST00000496385 SSR4P51571 173 aa7.25□□□□□ -1.25
HPS4-217ENST00000496385 PRR30Q53SZ7 412 aaPredicted RBP7.25□□□□□ -1.25
HPS4-217ENST00000496385 Q6Q795 121 aa7.25□□□□□ -1.25
HPS4-217ENST00000496385 VKORC1L1Q8N0U8 176 aa7.25□□□□□ -1.25
HPS4-217ENST00000496385 RBMXL3Q8N7X1 1067 aaKnown RBP7.25□□□□□ -1.25
HPS4-217ENST00000496385 FAM234AQ9H0X4 552 aa7.25□□□□□ -1.25
HPS4-217ENST00000496385 LINC01546A6NGU7 62 aa7.24□□□□□ -1.25
HPS4-217ENST00000496385 FSTL3O95633 263 aa7.24□□□□□ -1.25
HPS4-217ENST00000496385 TCRAP04437 139 aa7.24□□□□□ -1.25
HPS4-217ENST00000496385 CCL3P10147 92 aa7.24□□□□□ -1.25
HPS4-217ENST00000496385 MEOX1P50221 254 aa7.24□□□□□ -1.25
HPS4-217ENST00000496385 MORN5Q5VZ52 161 aa7.24□□□□□ -1.25
HPS4-217ENST00000496385 MOB3BQ86TA1 216 aa7.24□□□□□ -1.25
HPS4-217ENST00000496385 ORMDL3Q8N138 153 aa7.24□□□□□ -1.25
HPS4-217ENST00000496385 CITED1Q99966 193 aa7.24□□□□□ -1.25
HPS4-217ENST00000496385 MED12Q93074 2177 aa7.24□□□□□ -1.25
HPS4-217ENST00000496385 CENPVL3A0A0U1RRI6 287 aa7.24□□□□□ -1.25
HPS4-217ENST00000496385 ZNHIT1O43257 154 aa7.24□□□□□ -1.25
HPS4-217ENST00000496385 GNG5P63218 68 aa7.24□□□□□ -1.25
HPS4-217ENST00000496385 FAM53AQ6NSI3 398 aaPredicted RBP7.24□□□□□ -1.25
HPS4-217ENST00000496385 TEN1Q86WV5 123 aa7.24□□□□□ -1.25
HPS4-217ENST00000496385 OR13A1Q8NGR1 328 aa7.24□□□□□ -1.25
HPS4-217ENST00000496385 HIF1ANQ9NWT6 349 aa7.24□□□□□ -1.25
HPS4-217ENST00000496385 ZNF462Q96JM2 2506 aa7.23□□□□□ -1.25
HPS4-217ENST00000496385 ATP5LO75964 103 aa7.23□□□□□ -1.25
HPS4-217ENST00000496385 IGKCP01834 107 aa7.23□□□□□ -1.25
HPS4-217ENST00000496385 RNASE2P10153 161 aaKnown RBP7.23□□□□□ -1.25
HPS4-217ENST00000496385 SMIM20Q8N5G0 67 aa7.23□□□□□ -1.25
HPS4-217ENST00000496385 RAB9BQ9NP90 201 aa7.23□□□□□ -1.25
HPS4-217ENST00000496385 IGHV3-43A0A0B4J1X8 118 aa7.23□□□□□ -1.25
HPS4-217ENST00000496385 WI2-2373I1.2A0A1W2PRP0 233 aa7.23□□□□□ -1.25
HPS4-217ENST00000496385 PRSS29PA6NIE9 313 aa7.23□□□□□ -1.25
HPS4-217ENST00000496385 UPK2O00526 184 aa7.23□□□□□ -1.25
HPS4-217ENST00000496385 ZNF688P0C7X2 276 aa7.23□□□□□ -1.25
HPS4-217ENST00000496385 NHLRC4P0CG21 123 aaPredicted RBP7.23□□□□□ -1.25
HPS4-217ENST00000496385 IGHV3-43DP0DP04 118 aa7.23□□□□□ -1.25
HPS4-217ENST00000496385 ASIPP42127 132 aa7.23□□□□□ -1.25
HPS4-217ENST00000496385 AMTNQ6UX39 209 aa7.23□□□□□ -1.25
HPS4-217ENST00000496385 PATE2Q6UY27 113 aa7.23□□□□□ -1.25
HPS4-217ENST00000496385 THAP8Q8NA92 274 aa7.23□□□□□ -1.25
HPS4-217ENST00000496385 GNG12Q9UBI6 72 aa7.23□□□□□ -1.25
HPS4-217ENST00000496385 FABP5P3A8MUU1 101 aa7.22□□□□□ -1.25
HPS4-217ENST00000496385 DEFB108AA8MXU0 73 aa7.22□□□□□ -1.25
HPS4-217ENST00000496385 ARMS2P0C7Q2 107 aa7.22□□□□□ -1.25
HPS4-217ENST00000496385 LOXL1Q08397 574 aaPredicted RBP7.22□□□□□ -1.25
HPS4-217ENST00000496385 ODF1Q14990 250 aa7.22□□□□□ -1.25
HPS4-217ENST00000496385 TWIST1Q15672 202 aa7.22□□□□□ -1.25
HPS4-217ENST00000496385 FAM104BQ5XKR9 115 aa7.22□□□□□ -1.25
HPS4-217ENST00000496385 Q86TA4 180 aa7.22□□□□□ -1.25
HPS4-217ENST00000496385 NFE4Q86UQ8 179 aa7.22□□□□□ -1.25
HPS4-217ENST00000496385 DKK2Q9UBU2 259 aa7.22□□□□□ -1.25
HPS4-217ENST00000496385 A0A096LPE4 126 aa7.22□□□□□ -1.25
HPS4-217ENST00000496385 IGKV2D-26A0A0A0MRZ7 120 aa7.22□□□□□ -1.25
HPS4-217ENST00000496385 A0A1W2PPZ6 126 aa7.22□□□□□ -1.25
HPS4-217ENST00000496385 PINLYPA6NC86 204 aa7.22□□□□□ -1.25
HPS4-217ENST00000496385 M0QXV9 152 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms