RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 RICTORQ6R327 1708 aa6.37□□□□□ -1.39
BRCA1-221ENST00000493795 PROP1O75360 226 aa6.36□□□□□ -1.39
BRCA1-221ENST00000493795 ANGP03950 147 aaKnown RBP6.36□□□□□ -1.39
BRCA1-221ENST00000493795 PSMB8P28062 276 aa6.36□□□□□ -1.39
BRCA1-221ENST00000493795 SPINK13Q1W4C9 94 aa6.36□□□□□ -1.39
BRCA1-221ENST00000493795 COLQQ9Y215 455 aaPredicted RBP6.36□□□□□ -1.39
BRCA1-221ENST00000493795 H3BQ85 93 aa6.36□□□□□ -1.39
BRCA1-221ENST00000493795 ATOX1O00244 68 aa6.36□□□□□ -1.39
BRCA1-221ENST00000493795 NDUFB8O95169 186 aa6.36□□□□□ -1.39
BRCA1-221ENST00000493795 C18orf32Q8TCD1 76 aa6.36□□□□□ -1.39
BRCA1-221ENST00000493795 ALS2Q96Q42 1657 aa6.36□□□□□ -1.39
BRCA1-221ENST00000493795 J3QQQ9 107 aa6.36□□□□□ -1.39
BRCA1-221ENST00000493795 CACNA1SQ13698 1873 aa6.36□□□□□ -1.39
BRCA1-221ENST00000493795 SCN3AQ9NY46 2000 aa6.36□□□□□ -1.39
BRCA1-221ENST00000493795 CNTRLQ7Z7A1 2325 aa6.36□□□□□ -1.39
BRCA1-221ENST00000493795 SRSF2Q01130 221 aaKnown RBP6.36□□□□□ -1.39
BRCA1-221ENST00000493795 PAQR4Q8N4S7 273 aaPredicted RBP6.36□□□□□ -1.39
BRCA1-221ENST00000493795 CD177Q8N6Q3 437 aa6.36□□□□□ -1.39
BRCA1-221ENST00000493795 IGHV4-28A0A0C4DH34 117 aa6.36□□□□□ -1.39
BRCA1-221ENST00000493795 NRXN3Q9Y4C0 1643 aa6.36□□□□□ -1.39
BRCA1-221ENST00000493795 H3BMG7 143 aa6.35□□□□□ -1.39
BRCA1-221ENST00000493795 SIVA1O15304 175 aa6.35□□□□□ -1.39
BRCA1-221ENST00000493795 SPRR3Q9UBC9 169 aa6.35□□□□□ -1.39
BRCA1-221ENST00000493795 DKK4Q9UBT3 224 aa6.35□□□□□ -1.39
BRCA1-221ENST00000493795 GATA4P43694 442 aa6.35□□□□□ -1.39
BRCA1-221ENST00000493795 MRPL51Q4U2R6 128 aaKnown RBP6.35□□□□□ -1.39
BRCA1-221ENST00000493795 PRRC2BQ5JSZ5 2229 aaKnown RBP6.35□□□□□ -1.39
BRCA1-221ENST00000493795 IGKV2D-24A0A075B6R9 120 aa6.35□□□□□ -1.39
BRCA1-221ENST00000493795 MST1LQ2TV78 715 aa6.35□□□□□ -1.39
BRCA1-221ENST00000493795 LHFPL1Q86WI0 220 aa6.35□□□□□ -1.39
BRCA1-221ENST00000493795 MUSTN1Q8IVN3 82 aa6.35□□□□□ -1.39
BRCA1-221ENST00000493795 GAFA1Q96PS6 74 aa6.35□□□□□ -1.39
BRCA1-221ENST00000493795 ARID1AO14497 2285 aa6.35□□□□□ -1.39
BRCA1-221ENST00000493795 DICER1Q9UPY3 1922 aaKnown RBP6.35□□□□□ -1.39
BRCA1-221ENST00000493795 MRPL55Q7Z7F7 128 aaKnown RBP6.35□□□□□ -1.39
BRCA1-221ENST00000493795 FAM110DQ8TAY7 271 aaPredicted RBP6.35□□□□□ -1.39
BRCA1-221ENST00000493795 SCN8AQ9UQD0 1980 aa6.35□□□□□ -1.39
BRCA1-221ENST00000493795 MYO5AQ9Y4I1 1855 aaKnown RBP6.35□□□□□ -1.39
BRCA1-221ENST00000493795 K7ERJ3 54 aa6.34□□□□□ -1.39
BRCA1-221ENST00000493795 CRYGSP22914 178 aa6.34□□□□□ -1.39
BRCA1-221ENST00000493795 RPL18AQ02543 176 aaKnown RBP6.34□□□□□ -1.39
BRCA1-221ENST00000493795 SMIM20Q8N5G0 67 aa6.34□□□□□ -1.39
BRCA1-221ENST00000493795 FGFBP3Q8TAT2 258 aa6.34□□□□□ -1.39
BRCA1-221ENST00000493795 VSIG2Q96IQ7 327 aa6.34□□□□□ -1.39
BRCA1-221ENST00000493795 DOCK2Q92608 1830 aa6.34□□□□□ -1.39
BRCA1-221ENST00000493795 TRAV12-2A0A075B6T6 113 aa6.34□□□□□ -1.39
BRCA1-221ENST00000493795 IGKV1OR2-108A0A075B7D4 117 aa6.34□□□□□ -1.39
BRCA1-221ENST00000493795 IGLV3-32A0A0A0MS00 114 aa6.34□□□□□ -1.39
BRCA1-221ENST00000493795 TRAV26-2A0A0B4J265 109 aa6.34□□□□□ -1.39
BRCA1-221ENST00000493795 A0A0B4J2C4 111 aa6.34□□□□□ -1.39
BRCA1-221ENST00000493795 NPYP01303 97 aa6.34□□□□□ -1.39
BRCA1-221ENST00000493795 CFC1BP0CG36 223 aa6.34□□□□□ -1.39
BRCA1-221ENST00000493795 CFC1P0CG37 223 aa6.34□□□□□ -1.39
BRCA1-221ENST00000493795 TIRAPP58753 221 aa6.34□□□□□ -1.39
BRCA1-221ENST00000493795 IGFBPL1Q8WX77 278 aa6.34□□□□□ -1.39
BRCA1-221ENST00000493795 IGKV1-12A0A0C4DH73 117 aa6.34□□□□□ -1.39
BRCA1-221ENST00000493795 C15orf62A8K5M9 175 aa6.34□□□□□ -1.39
BRCA1-221ENST00000493795 IGKV1D-12P01611 117 aa6.34□□□□□ -1.39
BRCA1-221ENST00000493795 HERV-K104P63124 156 aa6.34□□□□□ -1.39
BRCA1-221ENST00000493795 IGF2BP2-AS1Q96M15 143 aa6.34□□□□□ -1.39
BRCA1-221ENST00000493795 ANKRD31Q8N7Z5 1873 aa6.34□□□□□ -1.39
BRCA1-221ENST00000493795 F8VRH5 84 aa6.34□□□□□ -1.39
BRCA1-221ENST00000493795 NREPQ16612 68 aa6.34□□□□□ -1.39
BRCA1-221ENST00000493795 ZNF503Q96F45 646 aa6.34□□□□□ -1.39
BRCA1-221ENST00000493795 CCDC88CQ9P219 2028 aa6.34□□□□□ -1.39
BRCA1-221ENST00000493795 COL22A1Q8NFW1 1626 aaPredicted RBP6.34□□□□□ -1.39
BRCA1-221ENST00000493795 KNTC1P50748 2209 aa6.34□□□□□ -1.39
BRCA1-221ENST00000493795 LAMA4Q16363 1823 aa6.34□□□□□ -1.39
BRCA1-221ENST00000493795 K7ERS5 55 aa6.34□□□□□ -1.4
BRCA1-221ENST00000493795 C12orf74Q32Q52 190 aa6.34□□□□□ -1.4
BRCA1-221ENST00000493795 MRPL35Q9NZE8 188 aaKnown RBP6.34□□□□□ -1.4
BRCA1-221ENST00000493795 USP54Q70EL1 1684 aa6.34□□□□□ -1.4
BRCA1-221ENST00000493795 TGFBR3LH3BV60 316 aa6.33□□□□□ -1.4
BRCA1-221ENST00000493795 IGKV1-39P01597 117 aa6.33□□□□□ -1.4
BRCA1-221ENST00000493795 IGKV1D-39P04432 117 aa6.33□□□□□ -1.4
BRCA1-221ENST00000493795 NPSP0C0P6 89 aa6.33□□□□□ -1.4
BRCA1-221ENST00000493795 LYL1P12980 280 aa6.33□□□□□ -1.4
BRCA1-221ENST00000493795 CDKN1BP46527 198 aa6.33□□□□□ -1.4
BRCA1-221ENST00000493795 EIF4EBP2Q13542 120 aaPredicted RBP6.33□□□□□ -1.4
BRCA1-221ENST00000493795 CLPSL2Q6UWE3 100 aa6.33□□□□□ -1.4
BRCA1-221ENST00000493795 SLC25A29Q8N8R3 303 aa6.33□□□□□ -1.4
BRCA1-221ENST00000493795 BRK1Q8WUW1 75 aa6.33□□□□□ -1.4
BRCA1-221ENST00000493795 ZMAT4Q9H898 229 aa6.33□□□□□ -1.4
BRCA1-221ENST00000493795 TRIP11Q15643 1979 aa6.33□□□□□ -1.4
BRCA1-221ENST00000493795 TRBV6-6A0A0A6YYG2 114 aa6.33□□□□□ -1.4
BRCA1-221ENST00000493795 YPEL3P61236 119 aaPredicted RBP6.33□□□□□ -1.4
BRCA1-221ENST00000493795 REG4Q9BYZ8 158 aa6.33□□□□□ -1.4
BRCA1-221ENST00000493795 PAPPAQ13219 1627 aa6.33□□□□□ -1.4
BRCA1-221ENST00000493795 IGHV4-4A0A075B6R2 117 aa6.33□□□□□ -1.4
BRCA1-221ENST00000493795 RGPD2P0DJD1 1756 aa6.33□□□□□ -1.4
BRCA1-221ENST00000493795 BRWD1Q9NSI6 2320 aa6.33□□□□□ -1.4
BRCA1-221ENST00000493795 LINC00473A8K010 186 aa6.32□□□□□ -1.4
BRCA1-221ENST00000493795 RHOHQ15669 191 aa6.32□□□□□ -1.4
BRCA1-221ENST00000493795 C4orf48Q5BLP8 95 aa6.32□□□□□ -1.4
BRCA1-221ENST00000493795 LINC00479Q96M42 142 aa6.32□□□□□ -1.4
BRCA1-221ENST00000493795 TIMM17AQ99595 171 aa6.32□□□□□ -1.4
BRCA1-221ENST00000493795 C20orf78Q9BR46 151 aa6.32□□□□□ -1.4
BRCA1-221ENST00000493795 PYGO2Q9BRQ0 406 aa6.32□□□□□ -1.4
BRCA1-221ENST00000493795 ASCC3Q8N3C0 2202 aaKnown RBP6.32□□□□□ -1.4
BRCA1-221ENST00000493795 A0A096LPF7 62 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms