RNA–Protein interactions for RNA: ENST00000493553.1

PRPF3-206, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-206ENST00000493553 HIST1H2BDP58876 126 aa7.81□□□□□ -1.16
PRPF3-206ENST00000493553 HIST1H2BCP62807 126 aa7.81□□□□□ -1.16
PRPF3-206ENST00000493553 FABP9Q0Z7S8 132 aa7.81□□□□□ -1.16
PRPF3-206ENST00000493553 HIST2H2BEQ16778 126 aa7.81□□□□□ -1.16
PRPF3-206ENST00000493553 DEFB113Q30KQ7 82 aa7.81□□□□□ -1.16
PRPF3-206ENST00000493553 KLF17Q5JT82 389 aaPredicted RBP7.81□□□□□ -1.16
PRPF3-206ENST00000493553 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.81□□□□□ -1.16
PRPF3-206ENST00000493553 MORN5Q5VZ52 161 aa7.81□□□□□ -1.16
PRPF3-206ENST00000493553 C19orf35Q6ZS72 473 aa7.81□□□□□ -1.16
PRPF3-206ENST00000493553 OR4B1Q8NGF8 309 aa7.81□□□□□ -1.16
PRPF3-206ENST00000493553 BLNKQ8WV28 456 aa7.81□□□□□ -1.16
PRPF3-206ENST00000493553 HIST1H2BHQ93079 126 aa7.81□□□□□ -1.16
PRPF3-206ENST00000493553 DAZAP1Q96EP5 407 aaKnown RBP7.81□□□□□ -1.16
PRPF3-206ENST00000493553 GRAMD2BQ96HH9 432 aa7.81□□□□□ -1.16
PRPF3-206ENST00000493553 C16orf92Q96LL3 132 aa7.81□□□□□ -1.16
PRPF3-206ENST00000493553 HIST1H2BNQ99877 126 aa7.81□□□□□ -1.16
PRPF3-206ENST00000493553 HIST1H2BMQ99879 126 aa7.81□□□□□ -1.16
PRPF3-206ENST00000493553 HSPB9Q9BQS6 159 aa7.81□□□□□ -1.16
PRPF3-206ENST00000493553 ZNF492Q9P255 531 aa7.81□□□□□ -1.16
PRPF3-206ENST00000493553 SOX21Q9Y651 276 aaPredicted RBP7.81□□□□□ -1.16
PRPF3-206ENST00000493553 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.8□□□□□ -1.16
PRPF3-206ENST00000493553 USP9YO00507 2555 aaPredicted RBP7.8□□□□□ -1.16
PRPF3-206ENST00000493553 GATCO43716 136 aaKnown RBP7.8□□□□□ -1.16
PRPF3-206ENST00000493553 RNF224P0DH78 156 aa7.8□□□□□ -1.16
PRPF3-206ENST00000493553 CDX1P47902 265 aaPredicted RBP7.8□□□□□ -1.16
PRPF3-206ENST00000493553 COA6Q5JTJ3 125 aaKnown RBP7.8□□□□□ -1.16
PRPF3-206ENST00000493553 Q6ZSN1 163 aa7.8□□□□□ -1.16
PRPF3-206ENST00000493553 C9orf139Q6ZV77 190 aa7.8□□□□□ -1.16
PRPF3-206ENST00000493553 OR8I2Q8N0Y5 310 aa7.8□□□□□ -1.16
PRPF3-206ENST00000493553 TMEM75Q8N9X5 138 aa7.8□□□□□ -1.16
PRPF3-206ENST00000493553 PIFOQ8TCI5 191 aa7.8□□□□□ -1.16
PRPF3-206ENST00000493553 METTL26Q96S19 204 aa7.8□□□□□ -1.16
PRPF3-206ENST00000493553 V9GYV3 84 aa7.8□□□□□ -1.16
PRPF3-206ENST00000493553 OR2T8A6NH00 312 aa7.79□□□□□ -1.16
PRPF3-206ENST00000493553 ZNF705GA8MUZ8 300 aaPredicted RBP7.79□□□□□ -1.16
PRPF3-206ENST00000493553 A8MWL6 223 aa7.79□□□□□ -1.16
PRPF3-206ENST00000493553 H3BUX3 64 aa7.79□□□□□ -1.16
PRPF3-206ENST00000493553 K7EN84 100 aa7.79□□□□□ -1.16
PRPF3-206ENST00000493553 LTAP01374 205 aa7.79□□□□□ -1.16
PRPF3-206ENST00000493553 CLEC3BP05452 202 aa7.79□□□□□ -1.16
PRPF3-206ENST00000493553 TRGC1P0CF51 173 aa7.79□□□□□ -1.16
PRPF3-206ENST00000493553 IGHV4-38-2P0DP08 117 aa7.79□□□□□ -1.16
PRPF3-206ENST00000493553 BMI1P35226 326 aa7.79□□□□□ -1.16
PRPF3-206ENST00000493553 C19orf54Q5BKX5 351 aa7.79□□□□□ -1.16
PRPF3-206ENST00000493553 ACTL10Q5JWF8 245 aa7.79□□□□□ -1.16
PRPF3-206ENST00000493553 SAPCD1Q5SSQ6 148 aa7.79□□□□□ -1.16
PRPF3-206ENST00000493553 SAMD13Q5VXD3 122 aa7.79□□□□□ -1.16
PRPF3-206ENST00000493553 RUSC1-AS1Q66K80 236 aa7.79□□□□□ -1.16
PRPF3-206ENST00000493553 BRD3OSQ6XYD6 125 aa7.79□□□□□ -1.16
PRPF3-206ENST00000493553 ATP5L2Q7Z4Y8 100 aa7.79□□□□□ -1.16
PRPF3-206ENST00000493553 ZNF747Q9BV97 191 aa7.79□□□□□ -1.16
PRPF3-206ENST00000493553 GNB1LQ9BYB4 327 aa7.79□□□□□ -1.16
PRPF3-206ENST00000493553 GFRA4Q9GZZ7 299 aa7.79□□□□□ -1.16
PRPF3-206ENST00000493553 ZNF586Q9NXT0 402 aa7.79□□□□□ -1.16
PRPF3-206ENST00000493553 TRAPPC1Q9Y5R8 145 aa7.79□□□□□ -1.16
PRPF3-206ENST00000493553 A0A087X0K7 114 aa7.78□□□□□ -1.16
PRPF3-206ENST00000493553 SMIM27A0A1W2PRY6 76 aa7.78□□□□□ -1.16
PRPF3-206ENST00000493553 PGPEP1LA6NFU8 196 aa7.78□□□□□ -1.16
PRPF3-206ENST00000493553 TGFAP01135 160 aa7.78□□□□□ -1.16
PRPF3-206ENST00000493553 IGLV2-8P01709 118 aa7.78□□□□□ -1.16
PRPF3-206ENST00000493553 TRGV3P03979 118 aa7.78□□□□□ -1.16
PRPF3-206ENST00000493553 NDUFA6P56556 154 aa7.78□□□□□ -1.16
PRPF3-206ENST00000493553 USF2Q15853 346 aaPredicted RBP7.78□□□□□ -1.16
PRPF3-206ENST00000493553 TMEM183AQ8IXX5 376 aa7.78□□□□□ -1.16
PRPF3-206ENST00000493553 LINC00518Q8N0U6 118 aa7.78□□□□□ -1.16
PRPF3-206ENST00000493553 TSKUQ8WUA8 353 aa7.78□□□□□ -1.16
PRPF3-206ENST00000493553 FRZBQ92765 325 aa7.78□□□□□ -1.16
PRPF3-206ENST00000493553 ZNF414Q96IQ9 312 aa7.78□□□□□ -1.16
PRPF3-206ENST00000493553 SLC50A1Q9BRV3 221 aa7.78□□□□□ -1.16
PRPF3-206ENST00000493553 ZNF331Q9NQX6 463 aaPredicted RBP7.78□□□□□ -1.16
PRPF3-206ENST00000493553 SERTAD4Q9NUC0 356 aa7.78□□□□□ -1.16
PRPF3-206ENST00000493553 NAT8BQ9UHF3 227 aa7.78□□□□□ -1.16
PRPF3-206ENST00000493553 UBR5O95071 2799 aaPredicted RBP7.77□□□□□ -1.16
PRPF3-206ENST00000493553 A0A096LNT2 108 aa7.77□□□□□ -1.17
PRPF3-206ENST00000493553 A0A1B0GW15 77 aa7.77□□□□□ -1.17
PRPF3-206ENST00000493553 A0A1W2PS18 150 aa7.77□□□□□ -1.17
PRPF3-206ENST00000493553 A1L4Q6 167 aa7.77□□□□□ -1.17
PRPF3-206ENST00000493553 XKRY2A2RUG3 117 aa7.77□□□□□ -1.17
PRPF3-206ENST00000493553 IZUMO1RA6ND01 250 aa7.77□□□□□ -1.17
PRPF3-206ENST00000493553 NDUFA4O00483 81 aa7.77□□□□□ -1.17
PRPF3-206ENST00000493553 MRPS12O15235 138 aaKnown RBP7.77□□□□□ -1.17
PRPF3-206ENST00000493553 P01737 135 aa7.77□□□□□ -1.17
PRPF3-206ENST00000493553 HLA-DQA1P01909 254 aa7.77□□□□□ -1.17
PRPF3-206ENST00000493553 CT45A10P0DMU9 189 aa7.77□□□□□ -1.17
PRPF3-206ENST00000493553 GPR183P32249 361 aa7.77□□□□□ -1.17
PRPF3-206ENST00000493553 SRSF1Q07955 248 aaKnown RBP eCLIP7.77□□□□□ -1.17
PRPF3-206ENST00000493553 C9orf152Q5JTZ5 239 aa7.77□□□□□ -1.17
PRPF3-206ENST00000493553 DNLZQ5SXM8 178 aa7.77□□□□□ -1.17
PRPF3-206ENST00000493553 LEMD1Q68G75 181 aa7.77□□□□□ -1.17
PRPF3-206ENST00000493553 Q6AWC8 147 aa7.77□□□□□ -1.17
PRPF3-206ENST00000493553 CYB5R2Q6BCY4 276 aa7.77□□□□□ -1.17
PRPF3-206ENST00000493553 TOMM20LQ6UXN7 152 aa7.77□□□□□ -1.17
PRPF3-206ENST00000493553 SIGLEC15Q6ZMC9 328 aa7.77□□□□□ -1.17
PRPF3-206ENST00000493553 WIPF2Q8TF74 440 aaPredicted RBP7.77□□□□□ -1.17
PRPF3-206ENST00000493553 MRPL53Q96EL3 112 aaKnown RBP7.77□□□□□ -1.17
PRPF3-206ENST00000493553 NDFIP1Q9BT67 221 aa7.77□□□□□ -1.17
PRPF3-206ENST00000493553 MLST8Q9BVC4 326 aa7.77□□□□□ -1.17
PRPF3-206ENST00000493553 AURKAIP1Q9NWT8 199 aaPredicted RBP7.77□□□□□ -1.17
PRPF3-206ENST00000493553 IGHV3OR16-10A0A075B7F0 116 aa7.76□□□□□ -1.17
PRPF3-206ENST00000493553 J3QKU1 62 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms