RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 TMEM14CQ9P0S9 112 aa10.1□□□□□ -0.79
MSH6-208ENST00000493177 TEX46H3BTG2 121 aa10.09□□□□□ -0.79
MSH6-208ENST00000493177 H3BTX0 84 aa10.09□□□□□ -0.79
MSH6-208ENST00000493177 DNASE2O00115 360 aaPredicted RBP10.09□□□□□ -0.79
MSH6-208ENST00000493177 PAFAH1B2P68402 229 aa10.09□□□□□ -0.79
MSH6-208ENST00000493177 IFITM2Q01629 132 aa10.09□□□□□ -0.79
MSH6-208ENST00000493177 GUCA2BQ16661 112 aa10.09□□□□□ -0.79
MSH6-208ENST00000493177 ZNF767PQ75MW2 155 aa10.09□□□□□ -0.79
MSH6-208ENST00000493177 BLNKQ8WV28 456 aa10.09□□□□□ -0.79
MSH6-208ENST00000493177 PCNPQ8WW12 178 aaKnown RBP10.09□□□□□ -0.79
MSH6-208ENST00000493177 MBD3L1Q8WWY6 194 aa10.09□□□□□ -0.79
MSH6-208ENST00000493177 ASCL2Q99929 193 aa10.09□□□□□ -0.79
MSH6-208ENST00000493177 MRPS12O15235 138 aaKnown RBP10.08□□□□□ -0.8
MSH6-208ENST00000493177 IGLV1-51P01701 117 aa10.08□□□□□ -0.8
MSH6-208ENST00000493177 HBE1P02100 147 aa10.08□□□□□ -0.8
MSH6-208ENST00000493177 HIST1H1EP10412 219 aaKnown RBP10.08□□□□□ -0.8
MSH6-208ENST00000493177 GCHFRP30047 84 aa10.08□□□□□ -0.8
MSH6-208ENST00000493177 RAB14P61106 215 aa10.08□□□□□ -0.8
MSH6-208ENST00000493177 FAM90A2PQ658T7 463 aa10.08□□□□□ -0.8
MSH6-208ENST00000493177 TMEM61Q8N0U2 210 aa10.08□□□□□ -0.8
MSH6-208ENST00000493177 OR2K2Q8NGT1 345 aa10.08□□□□□ -0.8
MSH6-208ENST00000493177 SAT2Q96F10 170 aaPredicted RBP10.08□□□□□ -0.8
MSH6-208ENST00000493177 ZNF503Q96F45 646 aa10.08□□□□□ -0.8
MSH6-208ENST00000493177 TMPRSS5Q9H3S3 457 aa10.08□□□□□ -0.8
MSH6-208ENST00000493177 SORL1Q92673 2214 aa10.07□□□□□ -0.8
MSH6-208ENST00000493177 TRAV25A0A0B4J276 109 aa10.07□□□□□ -0.8
MSH6-208ENST00000493177 IZUMO1RA6ND01 250 aa10.07□□□□□ -0.8
MSH6-208ENST00000493177 NBEAP1P0C6P0 100 aa10.07□□□□□ -0.8
MSH6-208ENST00000493177 NHLRC4P0CG21 123 aaPredicted RBP10.07□□□□□ -0.8
MSH6-208ENST00000493177 LCN12Q6JVE5 192 aa10.07□□□□□ -0.8
MSH6-208ENST00000493177 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.07□□□□□ -0.8
MSH6-208ENST00000493177 FXYD5Q96DB9 178 aa10.07□□□□□ -0.8
MSH6-208ENST00000493177 MS4A6AQ9H2W1 248 aa10.07□□□□□ -0.8
MSH6-208ENST00000493177 HRH4Q9H3N8 390 aa10.07□□□□□ -0.8
MSH6-208ENST00000493177 NRN1Q9NPD7 142 aa10.07□□□□□ -0.8
MSH6-208ENST00000493177 TMEM167BQ9NRX6 74 aa10.07□□□□□ -0.8
MSH6-208ENST00000493177 ZNF586Q9NXT0 402 aa10.07□□□□□ -0.8
MSH6-208ENST00000493177 A0A087X0K7 114 aa10.06□□□□□ -0.8
MSH6-208ENST00000493177 H3BQ15 152 aa10.06□□□□□ -0.8
MSH6-208ENST00000493177 TSPAN4O14817 238 aa10.06□□□□□ -0.8
MSH6-208ENST00000493177 IGLC2P0DOY2 106 aa10.06□□□□□ -0.8
MSH6-208ENST00000493177 MEOX2P50222 304 aa10.06□□□□□ -0.8
MSH6-208ENST00000493177 GUK1Q16774 197 aa10.06□□□□□ -0.8
MSH6-208ENST00000493177 GTSCR1Q86UQ5 136 aa10.06□□□□□ -0.8
MSH6-208ENST00000493177 C16orf92Q96LL3 132 aa10.06□□□□□ -0.8
MSH6-208ENST00000493177 C17orf77Q96MU5 243 aa10.06□□□□□ -0.8
MSH6-208ENST00000493177 TGP01266 2768 aa10.06□□□□□ -0.8
MSH6-208ENST00000493177 TRBV19A0A075B6N1 114 aa10.05□□□□□ -0.8
MSH6-208ENST00000493177 OR4C46A6NHA9 309 aa10.05□□□□□ -0.8
MSH6-208ENST00000493177 ID1P41134 155 aa10.05□□□□□ -0.8
MSH6-208ENST00000493177 SPAG8Q99932 426 aaPredicted RBP10.05□□□□□ -0.8
MSH6-208ENST00000493177 TRAV1-1A0A0B4J248 108 aa10.04□□□□□ -0.8
MSH6-208ENST00000493177 SLC17A3O00476 420 aa10.04□□□□□ -0.8
MSH6-208ENST00000493177 PSMB3P49720 205 aa10.04□□□□□ -0.8
MSH6-208ENST00000493177 PPT1P50897 306 aa10.04□□□□□ -0.8
MSH6-208ENST00000493177 UBE2G2P60604 165 aa10.04□□□□□ -0.8
MSH6-208ENST00000493177 RANP62826 216 aaKnown RBP10.04□□□□□ -0.8
MSH6-208ENST00000493177 CCL20P78556 96 aa10.04□□□□□ -0.8
MSH6-208ENST00000493177 PSG9Q00887 426 aa10.04□□□□□ -0.8
MSH6-208ENST00000493177 SAMD13Q5VXD3 122 aa10.04□□□□□ -0.8
MSH6-208ENST00000493177 IGFL4Q6B9Z1 124 aa10.04□□□□□ -0.8
MSH6-208ENST00000493177 LINC00052Q96N35 136 aa10.04□□□□□ -0.8
MSH6-208ENST00000493177 SLC50A1Q9BRV3 221 aa10.04□□□□□ -0.8
MSH6-208ENST00000493177 GNG13Q9P2W3 67 aa10.04□□□□□ -0.8
MSH6-208ENST00000493177 U3KQK5 164 aa10.04□□□□□ -0.8
MSH6-208ENST00000493177 K7EQG2 157 aa10.03□□□□□ -0.8
MSH6-208ENST00000493177 IFNA1P01562 189 aa10.03□□□□□ -0.8
MSH6-208ENST00000493177 NMBP08949 121 aa10.03□□□□□ -0.8
MSH6-208ENST00000493177 FRMD6-AS1P0C7T7 363 aa10.03□□□□□ -0.8
MSH6-208ENST00000493177 PDE6HQ13956 83 aa10.03□□□□□ -0.8
MSH6-208ENST00000493177 DCANP1Q8TF63 244 aa10.03□□□□□ -0.8
MSH6-208ENST00000493177 WWC2-AS2Q96NR7 200 aa10.03□□□□□ -0.8
MSH6-208ENST00000493177 AAMDCQ9H7C9 122 aa10.03□□□□□ -0.8
MSH6-208ENST00000493177 ZMAT4Q9H898 229 aa10.03□□□□□ -0.8
MSH6-208ENST00000493177 TRAV2A0A0B4J234 112 aa10.02□□□□□ -0.81
MSH6-208ENST00000493177 ZNF253O75346 499 aa10.02□□□□□ -0.81
MSH6-208ENST00000493177 NDUFB4O95168 129 aa10.02□□□□□ -0.81
MSH6-208ENST00000493177 ZNF688P0C7X2 276 aa10.02□□□□□ -0.81
MSH6-208ENST00000493177 SNRPD3P62318 126 aaKnown RBP10.02□□□□□ -0.81
MSH6-208ENST00000493177 CST9LP1Q5W188 147 aa10.02□□□□□ -0.81
MSH6-208ENST00000493177 EXOC3-AS1Q8N2X6 119 aa10.02□□□□□ -0.81
MSH6-208ENST00000493177 SUN5Q8TC36 379 aa10.02□□□□□ -0.81
MSH6-208ENST00000493177 Q9H3A6 140 aa10.02□□□□□ -0.81
MSH6-208ENST00000493177 TUBA4BQ9H853 241 aa10.02□□□□□ -0.81
MSH6-208ENST00000493177 ZNF331Q9NQX6 463 aaPredicted RBP10.02□□□□□ -0.81
MSH6-208ENST00000493177 TRAV8-2A0A0B4J237 113 aa10.01□□□□□ -0.81
MSH6-208ENST00000493177 PGPA6NDG6 321 aa10.01□□□□□ -0.81
MSH6-208ENST00000493177 ISLRO14498 428 aa10.01□□□□□ -0.81
MSH6-208ENST00000493177 SOCS3O14543 225 aa10.01□□□□□ -0.81
MSH6-208ENST00000493177 RGS13O14921 159 aa10.01□□□□□ -0.81
MSH6-208ENST00000493177 PAGE4O60829 102 aa10.01□□□□□ -0.81
MSH6-208ENST00000493177 HLA-DMBP28068 263 aa10.01□□□□□ -0.81
MSH6-208ENST00000493177 ICAM4Q14773 271 aa10.01□□□□□ -0.81
MSH6-208ENST00000493177 PSMG4Q5JS54 123 aa10.01□□□□□ -0.81
MSH6-208ENST00000493177 CLLU1Q5K131 121 aa10.01□□□□□ -0.81
MSH6-208ENST00000493177 SBSPONQ8IVN8 264 aa10.01□□□□□ -0.81
MSH6-208ENST00000493177 FAM24BQ8N5W8 94 aa10.01□□□□□ -0.81
MSH6-208ENST00000493177 RNF182Q8N6D2 247 aa10.01□□□□□ -0.81
MSH6-208ENST00000493177 MANBALQ9NQG1 85 aa10.01□□□□□ -0.81
MSH6-208ENST00000493177 OTORQ9NRC9 128 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 912.5 ms