RNA–Protein interactions for RNA: ENST00000491857.1

PSMD4-212, Transcript of proteasome 26S subunit, non-ATPase 4, humanhuman

TSL 2

Gene PSMD4, Length 461 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4-212ENST00000491857 CCDC28AQ8IWP9 274 aa11.72□□□□□ -0.53
PSMD4-212ENST00000491857 RNF24Q9Y225 148 aa11.72□□□□□ -0.53
PSMD4-212ENST00000491857 HYPMO75409 117 aa11.71□□□□□ -0.53
PSMD4-212ENST00000491857 RLN2P04090 185 aa11.71□□□□□ -0.53
PSMD4-212ENST00000491857 TMEM128Q5BJH2 165 aa11.71□□□□□ -0.53
PSMD4-212ENST00000491857 SPANXN5Q5MJ07 72 aa11.71□□□□□ -0.53
PSMD4-212ENST00000491857 CYP2G1PQ6ZSU1 146 aa11.71□□□□□ -0.53
PSMD4-212ENST00000491857 LINC00612Q8N6U2 182 aa11.71□□□□□ -0.53
PSMD4-212ENST00000491857 LRTM2Q8N967 370 aa11.71□□□□□ -0.53
PSMD4-212ENST00000491857 ZNF586Q9NXT0 402 aa11.71□□□□□ -0.53
PSMD4-212ENST00000491857 RSL24D1Q9UHA3 163 aaKnown RBP11.71□□□□□ -0.53
PSMD4-212ENST00000491857 STRAPQ9Y3F4 350 aaKnown RBP11.71□□□□□ -0.53
PSMD4-212ENST00000491857 SMCO3A2RU48 225 aa11.7□□□□□ -0.54
PSMD4-212ENST00000491857 SNURFLB1AK76 121 aa11.7□□□□□ -0.54
PSMD4-212ENST00000491857 OR5G3P0C626 314 aa11.7□□□□□ -0.54
PSMD4-212ENST00000491857 LINC00869P0C866 280 aa11.7□□□□□ -0.54
PSMD4-212ENST00000491857 INAFM2P0DMQ5 153 aa11.7□□□□□ -0.54
PSMD4-212ENST00000491857 SELENOTP62341 195 aa11.7□□□□□ -0.54
PSMD4-212ENST00000491857 TMED4Q7Z7H5 227 aa11.7□□□□□ -0.54
PSMD4-212ENST00000491857 RPUSD4Q96CM3 377 aaKnown RBP11.7□□□□□ -0.54
PSMD4-212ENST00000491857 H3BP45 60 aa11.69□□□□□ -0.54
PSMD4-212ENST00000491857 EREGO14944 169 aa11.69□□□□□ -0.54
PSMD4-212ENST00000491857 CXCL2P19875 107 aa11.69□□□□□ -0.54
PSMD4-212ENST00000491857 HOXA5P20719 270 aa11.69□□□□□ -0.54
PSMD4-212ENST00000491857 VAMP1P23763 118 aa11.69□□□□□ -0.54
PSMD4-212ENST00000491857 FAUP35544 74 aaKnown RBP11.69□□□□□ -0.54
PSMD4-212ENST00000491857 LINC00315P59091 139 aa11.69□□□□□ -0.54
PSMD4-212ENST00000491857 PLP1P60201 277 aa11.69□□□□□ -0.54
PSMD4-212ENST00000491857 PGPEP1Q9NXJ5 209 aa11.69□□□□□ -0.54
PSMD4-212ENST00000491857 GAGE12BA1L429 117 aa11.68□□□□□ -0.54
PSMD4-212ENST00000491857 GAGE7O76087 117 aa11.68□□□□□ -0.54
PSMD4-212ENST00000491857 GAGE12FP0CL80 117 aa11.68□□□□□ -0.54
PSMD4-212ENST00000491857 GAGE12GP0CL81 117 aa11.68□□□□□ -0.54
PSMD4-212ENST00000491857 GAGE12IP0CL82 117 aa11.68□□□□□ -0.54
PSMD4-212ENST00000491857 LCN15Q6UWW0 184 aa11.68□□□□□ -0.54
PSMD4-212ENST00000491857 SLC50A1Q9BRV3 221 aa11.68□□□□□ -0.54
PSMD4-212ENST00000491857 ANXA7P20073 488 aaKnown RBP11.67□□□□□ -0.54
PSMD4-212ENST00000491857 CDPF1Q6NVV7 123 aa11.67□□□□□ -0.54
PSMD4-212ENST00000491857 SPCS2Q15005 226 aa11.66□□□□□ -0.54
PSMD4-212ENST00000491857 GFI1BQ5VTD9 330 aa11.66□□□□□ -0.54
PSMD4-212ENST00000491857 LYPD1Q8N2G4 141 aa11.66□□□□□ -0.54
PSMD4-212ENST00000491857 ARL6Q9H0F7 186 aa11.66□□□□□ -0.54
PSMD4-212ENST00000491857 ZNF331Q9NQX6 463 aaPredicted RBP11.66□□□□□ -0.54
PSMD4-212ENST00000491857 PMS2P5A8MQ11 134 aa11.65□□□□□ -0.54
PSMD4-212ENST00000491857 HOXB5P09067 269 aa11.65□□□□□ -0.54
PSMD4-212ENST00000491857 ERVFC1-1P60608 527 aa11.65□□□□□ -0.54
PSMD4-212ENST00000491857 Q6ZRN7 208 aaPredicted RBP11.65□□□□□ -0.54
PSMD4-212ENST00000491857 CCDC190Q86UF4 302 aa11.65□□□□□ -0.54
PSMD4-212ENST00000491857 FRZBQ92765 325 aa11.65□□□□□ -0.54
PSMD4-212ENST00000491857 ARV1Q9H2C2 271 aa11.65□□□□□ -0.54
PSMD4-212ENST00000491857 CCDC59Q9P031 241 aaKnown RBP11.65□□□□□ -0.54
PSMD4-212ENST00000491857 MRPS12O15235 138 aaKnown RBP11.64□□□□□ -0.55
PSMD4-212ENST00000491857 SIVA1O15304 175 aa11.64□□□□□ -0.55
PSMD4-212ENST00000491857 SFT2D2O95562 160 aa11.64□□□□□ -0.55
PSMD4-212ENST00000491857 SMIM18P0DKX4 95 aa11.64□□□□□ -0.55
PSMD4-212ENST00000491857 PRB4P10163 310 aaPredicted RBP11.64□□□□□ -0.55
PSMD4-212ENST00000491857 AP3S2P59780 193 aa11.64□□□□□ -0.55
PSMD4-212ENST00000491857 DAZ2Q13117 558 aaKnown RBP11.64□□□□□ -0.55
PSMD4-212ENST00000491857 KIR3DS1Q14943 382 aa11.64□□□□□ -0.55
PSMD4-212ENST00000491857 PXDC1Q5TGL8 231 aa11.64□□□□□ -0.55
PSMD4-212ENST00000491857 SLC25A21Q9BQT8 299 aaPredicted RBP11.64□□□□□ -0.55
PSMD4-212ENST00000491857 TMPRSS5Q9H3S3 457 aa11.64□□□□□ -0.55
PSMD4-212ENST00000491857 PSENENQ9NZ42 101 aa11.64□□□□□ -0.55
PSMD4-212ENST00000491857 FAT1Q14517 4588 aa11.64□□□□□ -0.55
PSMD4-212ENST00000491857 PPP1R1AQ13522 171 aa11.63□□□□□ -0.55
PSMD4-212ENST00000491857 Q5VSD8 79 aa11.63□□□□□ -0.55
PSMD4-212ENST00000491857 BPIFA4PQ86YQ2 179 aa11.63□□□□□ -0.55
PSMD4-212ENST00000491857 PYGO2Q9BRQ0 406 aa11.63□□□□□ -0.55
PSMD4-212ENST00000491857 PARD6GQ9BYG4 376 aaPredicted RBP11.63□□□□□ -0.55
PSMD4-212ENST00000491857 NPVFQ9HCQ7 196 aa11.63□□□□□ -0.55
PSMD4-212ENST00000491857 TRGV2A0A075B6R0 118 aa11.62□□□□□ -0.55
PSMD4-212ENST00000491857 A0A096LPF7 62 aa11.62□□□□□ -0.55
PSMD4-212ENST00000491857 FABP12A6NFH5 140 aa11.62□□□□□ -0.55
PSMD4-212ENST00000491857 FNDC10F2Z333 226 aa11.62□□□□□ -0.55
PSMD4-212ENST00000491857 K7EPK0 472 aa11.62□□□□□ -0.55
PSMD4-212ENST00000491857 LEPP41159 167 aa11.62□□□□□ -0.55
PSMD4-212ENST00000491857 ID3Q02535 119 aa11.62□□□□□ -0.55
PSMD4-212ENST00000491857 TEPPQ6URK8 271 aa11.62□□□□□ -0.55
PSMD4-212ENST00000491857 PATE2Q6UY27 113 aa11.62□□□□□ -0.55
PSMD4-212ENST00000491857 Q6ZTI0 123 aa11.62□□□□□ -0.55
PSMD4-212ENST00000491857 TOMM5Q8N4H5 51 aa11.62□□□□□ -0.55
PSMD4-212ENST00000491857 VSIG2Q96IQ7 327 aa11.62□□□□□ -0.55
PSMD4-212ENST00000491857 MGAT4CQ9UBM8 478 aa11.62□□□□□ -0.55
PSMD4-212ENST00000491857 PXMP4Q9Y6I8 212 aa11.62□□□□□ -0.55
PSMD4-212ENST00000491857 IFNA5P01569 189 aa11.61□□□□□ -0.55
PSMD4-212ENST00000491857 XGP55808 180 aa11.61□□□□□ -0.55
PSMD4-212ENST00000491857 RRAS2P62070 204 aaPredicted RBP11.61□□□□□ -0.55
PSMD4-212ENST00000491857 POLR2GP62487 172 aaKnown RBP eCLIP11.61□□□□□ -0.55
PSMD4-212ENST00000491857 LINC00305Q7Z4B0 112 aa11.61□□□□□ -0.55
PSMD4-212ENST00000491857 ZNF546Q86UE3 836 aa11.61□□□□□ -0.55
PSMD4-212ENST00000491857 NFE4Q86UQ8 179 aa11.61□□□□□ -0.55
PSMD4-212ENST00000491857 ZNF680Q8NEM1 530 aa11.61□□□□□ -0.55
PSMD4-212ENST00000491857 DYNC2LI1Q8TCX1 351 aa11.61□□□□□ -0.55
PSMD4-212ENST00000491857 C18orf15Q96N68 181 aa11.61□□□□□ -0.55
PSMD4-212ENST00000491857 ODF3Q96PU9 254 aa11.61□□□□□ -0.55
PSMD4-212ENST00000491857 TRAV12-3A0A0B4J271 114 aa11.6□□□□□ -0.55
PSMD4-212ENST00000491857 J3KRW8 73 aa11.6□□□□□ -0.55
PSMD4-212ENST00000491857 GOSR2O14653 212 aa11.6□□□□□ -0.55
PSMD4-212ENST00000491857 SSSCA1O60232 199 aa11.6□□□□□ -0.55
PSMD4-212ENST00000491857 SLC38A11Q08AI6 406 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms