RNA–Protein interactions for RNA: ENST00000491075.1

CLIP2-208, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-208ENST00000491075 HOXA5P20719 270 aa14.25□□□□□ -0.13
CLIP2-208ENST00000491075 LINC00315P59091 139 aa14.25□□□□□ -0.13
CLIP2-208ENST00000491075 CYP2G1PQ6ZSU1 146 aa14.25□□□□□ -0.13
CLIP2-208ENST00000491075 DIRAS2Q96HU8 199 aa14.25□□□□□ -0.13
CLIP2-208ENST00000491075 HYPMO75409 117 aa14.24□□□□□ -0.13
CLIP2-208ENST00000491075 RLN2P04090 185 aa14.24□□□□□ -0.13
CLIP2-208ENST00000491075 IL5P05113 134 aa14.24□□□□□ -0.13
CLIP2-208ENST00000491075 TMEM128Q5BJH2 165 aa14.24□□□□□ -0.13
CLIP2-208ENST00000491075 SPANXN5Q5MJ07 72 aa14.24□□□□□ -0.13
CLIP2-208ENST00000491075 S100A7AQ86SG5 101 aa14.24□□□□□ -0.13
CLIP2-208ENST00000491075 CCDC28AQ8IWP9 274 aa14.24□□□□□ -0.13
CLIP2-208ENST00000491075 LRTM2Q8N967 370 aa14.24□□□□□ -0.13
CLIP2-208ENST00000491075 RPUSD4Q96CM3 377 aaKnown RBP14.24□□□□□ -0.13
CLIP2-208ENST00000491075 PGPEP1Q9NXJ5 209 aa14.24□□□□□ -0.13
CLIP2-208ENST00000491075 GAGE12BA1L429 117 aa14.23□□□□□ -0.13
CLIP2-208ENST00000491075 GAGE7O76087 117 aa14.23□□□□□ -0.13
CLIP2-208ENST00000491075 GAGE12FP0CL80 117 aa14.23□□□□□ -0.13
CLIP2-208ENST00000491075 GAGE12GP0CL81 117 aa14.23□□□□□ -0.13
CLIP2-208ENST00000491075 GAGE12IP0CL82 117 aa14.23□□□□□ -0.13
CLIP2-208ENST00000491075 PLP1P60201 277 aa14.23□□□□□ -0.13
CLIP2-208ENST00000491075 STRAPQ9Y3F4 350 aaKnown RBP14.23□□□□□ -0.13
CLIP2-208ENST00000491075 SNURFLB1AK76 121 aa14.22□□□□□ -0.13
CLIP2-208ENST00000491075 H3BP45 60 aa14.22□□□□□ -0.13
CLIP2-208ENST00000491075 OR5G3P0C626 314 aa14.22□□□□□ -0.13
CLIP2-208ENST00000491075 LINC00869P0C866 280 aa14.22□□□□□ -0.13
CLIP2-208ENST00000491075 CXCL2P19875 107 aa14.22□□□□□ -0.13
CLIP2-208ENST00000491075 SELENOTP62341 195 aa14.22□□□□□ -0.13
CLIP2-208ENST00000491075 CDPF1Q6NVV7 123 aa14.22□□□□□ -0.13
CLIP2-208ENST00000491075 Q6ZRN7 208 aaPredicted RBP14.22□□□□□ -0.13
CLIP2-208ENST00000491075 TMED4Q7Z7H5 227 aa14.22□□□□□ -0.13
CLIP2-208ENST00000491075 LYPD1Q8N2G4 141 aa14.22□□□□□ -0.13
CLIP2-208ENST00000491075 RNF24Q9Y225 148 aa14.22□□□□□ -0.13
CLIP2-208ENST00000491075 FAT1Q14517 4588 aa14.21□□□□□ -0.13
CLIP2-208ENST00000491075 SMCO3A2RU48 225 aa14.21□□□□□ -0.13
CLIP2-208ENST00000491075 EREGO14944 169 aa14.21□□□□□ -0.13
CLIP2-208ENST00000491075 VAMP1P23763 118 aa14.21□□□□□ -0.13
CLIP2-208ENST00000491075 RSL24D1Q9UHA3 163 aaKnown RBP14.21□□□□□ -0.13
CLIP2-208ENST00000491075 GFI1BQ5VTD9 330 aa14.2□□□□□ -0.14
CLIP2-208ENST00000491075 LCN15Q6UWW0 184 aa14.2□□□□□ -0.14
CLIP2-208ENST00000491075 PRB4P10163 310 aaPredicted RBP14.19□□□□□ -0.14
CLIP2-208ENST00000491075 FAUP35544 74 aaKnown RBP14.19□□□□□ -0.14
CLIP2-208ENST00000491075 ERVFC1-1P60608 527 aa14.19□□□□□ -0.14
CLIP2-208ENST00000491075 KIR3DS1Q14943 382 aa14.19□□□□□ -0.14
CLIP2-208ENST00000491075 Q5VSD8 79 aa14.19□□□□□ -0.14
CLIP2-208ENST00000491075 FRZBQ92765 325 aa14.19□□□□□ -0.14
CLIP2-208ENST00000491075 SLC50A1Q9BRV3 221 aa14.19□□□□□ -0.14
CLIP2-208ENST00000491075 TMPRSS5Q9H3S3 457 aa14.19□□□□□ -0.14
CLIP2-208ENST00000491075 ZNF331Q9NQX6 463 aaPredicted RBP14.19□□□□□ -0.14
CLIP2-208ENST00000491075 PMS2P5A8MQ11 134 aa14.18□□□□□ -0.14
CLIP2-208ENST00000491075 MRPS12O15235 138 aaKnown RBP14.18□□□□□ -0.14
CLIP2-208ENST00000491075 ANXA7P20073 488 aaKnown RBP14.18□□□□□ -0.14
CLIP2-208ENST00000491075 XGP55808 180 aa14.18□□□□□ -0.14
CLIP2-208ENST00000491075 SPCS2Q15005 226 aa14.18□□□□□ -0.14
CLIP2-208ENST00000491075 MYCBP2O75592 4640 aa14.18□□□□□ -0.14
CLIP2-208ENST00000491075 VPS13BQ7Z7G8 4022 aa14.17□□□□□ -0.14
CLIP2-208ENST00000491075 A0A096LPF7 62 aa14.17□□□□□ -0.14
CLIP2-208ENST00000491075 SIVA1O15304 175 aa14.17□□□□□ -0.14
CLIP2-208ENST00000491075 SMIM18P0DKX4 95 aa14.17□□□□□ -0.14
CLIP2-208ENST00000491075 CCDC190Q86UF4 302 aa14.17□□□□□ -0.14
CLIP2-208ENST00000491075 PARD6GQ9BYG4 376 aaPredicted RBP14.17□□□□□ -0.14
CLIP2-208ENST00000491075 ARL6Q9H0F7 186 aa14.17□□□□□ -0.14
CLIP2-208ENST00000491075 HOXB5P09067 269 aa14.16□□□□□ -0.14
CLIP2-208ENST00000491075 DAZ2Q13117 558 aaKnown RBP14.16□□□□□ -0.14
CLIP2-208ENST00000491075 VSIG2Q96IQ7 327 aa14.16□□□□□ -0.14
CLIP2-208ENST00000491075 ARV1Q9H2C2 271 aa14.16□□□□□ -0.14
CLIP2-208ENST00000491075 CCDC59Q9P031 241 aaKnown RBP14.16□□□□□ -0.14
CLIP2-208ENST00000491075 K7EPK0 472 aa14.15□□□□□ -0.14
CLIP2-208ENST00000491075 SFT2D2O95562 160 aa14.15□□□□□ -0.14
CLIP2-208ENST00000491075 PXDC1Q5TGL8 231 aa14.15□□□□□ -0.14
CLIP2-208ENST00000491075 PATE2Q6UY27 113 aa14.15□□□□□ -0.14
CLIP2-208ENST00000491075 Q6ZTI0 123 aa14.15□□□□□ -0.14
CLIP2-208ENST00000491075 PYGO2Q9BRQ0 406 aa14.15□□□□□ -0.14
CLIP2-208ENST00000491075 FUSP35637 526 aaKnown RBP eCLIP14.14□□□□□ -0.15
CLIP2-208ENST00000491075 C18orf15Q96N68 181 aa14.14□□□□□ -0.15
CLIP2-208ENST00000491075 ODF3Q96PU9 254 aa14.14□□□□□ -0.15
CLIP2-208ENST00000491075 PSENENQ9NZ42 101 aa14.14□□□□□ -0.15
CLIP2-208ENST00000491075 SRRM2Q9UQ35 2752 aaKnown RBP14.13□□□□□ -0.15
CLIP2-208ENST00000491075 TRGV2A0A075B6R0 118 aa14.13□□□□□ -0.15
CLIP2-208ENST00000491075 TRAV12-3A0A0B4J271 114 aa14.13□□□□□ -0.15
CLIP2-208ENST00000491075 FNDC10F2Z333 226 aa14.13□□□□□ -0.15
CLIP2-208ENST00000491075 LEPP41159 167 aa14.13□□□□□ -0.15
CLIP2-208ENST00000491075 AP3S2P59780 193 aa14.13□□□□□ -0.15
CLIP2-208ENST00000491075 ID3Q02535 119 aa14.13□□□□□ -0.15
CLIP2-208ENST00000491075 PPP1R1AQ13522 171 aa14.13□□□□□ -0.15
CLIP2-208ENST00000491075 BPIFA4PQ86YQ2 179 aa14.13□□□□□ -0.15
CLIP2-208ENST00000491075 SLC25A21Q9BQT8 299 aaPredicted RBP14.13□□□□□ -0.15
CLIP2-208ENST00000491075 NPVFQ9HCQ7 196 aa14.13□□□□□ -0.15
CLIP2-208ENST00000491075 FABP12A6NFH5 140 aa14.12□□□□□ -0.15
CLIP2-208ENST00000491075 PRAC2D3DTV9 90 aa14.12□□□□□ -0.15
CLIP2-208ENST00000491075 J3KRW8 73 aa14.12□□□□□ -0.15
CLIP2-208ENST00000491075 NXPH4O95158 308 aa14.12□□□□□ -0.15
CLIP2-208ENST00000491075 IFNA5P01569 189 aa14.12□□□□□ -0.15
CLIP2-208ENST00000491075 RRAS2P62070 204 aaPredicted RBP14.12□□□□□ -0.15
CLIP2-208ENST00000491075 POLR2GP62487 172 aaKnown RBP eCLIP14.12□□□□□ -0.15
CLIP2-208ENST00000491075 TEPPQ6URK8 271 aa14.12□□□□□ -0.15
CLIP2-208ENST00000491075 LINC00305Q7Z4B0 112 aa14.12□□□□□ -0.15
CLIP2-208ENST00000491075 NFE4Q86UQ8 179 aa14.12□□□□□ -0.15
CLIP2-208ENST00000491075 DYNC2LI1Q8TCX1 351 aa14.12□□□□□ -0.15
CLIP2-208ENST00000491075 SOSTQ9BQB4 213 aa14.12□□□□□ -0.15
CLIP2-208ENST00000491075 PXMP4Q9Y6I8 212 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms