RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 PTPRSQ13332 1948 aa3.8□□□□□ -1.8
SNRNP40-206ENST00000489853 TRBV7-3A0A075B6L6 115 aa3.8□□□□□ -1.8
SNRNP40-206ENST00000489853 IGHV3-15A0A0B4J1V0 119 aa3.8□□□□□ -1.8
SNRNP40-206ENST00000489853 IGHV5-51A0A0C4DH38 117 aa3.8□□□□□ -1.8
SNRNP40-206ENST00000489853 A0A1W2PQF6 199 aa3.8□□□□□ -1.8
SNRNP40-206ENST00000489853 TMEM213A2RRL7 107 aa3.8□□□□□ -1.8
SNRNP40-206ENST00000489853 FCGR3BO75015 233 aa3.8□□□□□ -1.8
SNRNP40-206ENST00000489853 SCGB2A1O75556 95 aa3.8□□□□□ -1.8
SNRNP40-206ENST00000489853 MT-CO3P00414 261 aa3.8□□□□□ -1.8
SNRNP40-206ENST00000489853 IGHG3P01860 377 aa3.8□□□□□ -1.8
SNRNP40-206ENST00000489853 CELA2AP08217 269 aa3.8□□□□□ -1.8
SNRNP40-206ENST00000489853 MYOD1P15172 320 aa3.8□□□□□ -1.8
SNRNP40-206ENST00000489853 CXCL12P48061 93 aa3.8□□□□□ -1.8
SNRNP40-206ENST00000489853 PSMB2P49721 201 aa3.8□□□□□ -1.8
SNRNP40-206ENST00000489853 ZNF766Q5HY98 468 aa3.8□□□□□ -1.8
SNRNP40-206ENST00000489853 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.8□□□□□ -1.8
SNRNP40-206ENST00000489853 SEM1Q6ZVN7 128 aa3.8□□□□□ -1.8
SNRNP40-206ENST00000489853 AAED1Q7RTV5 226 aa3.8□□□□□ -1.8
SNRNP40-206ENST00000489853 PPP1R27Q86WC6 154 aa3.8□□□□□ -1.8
SNRNP40-206ENST00000489853 RBMXL3Q8N7X1 1067 aaKnown RBP3.8□□□□□ -1.8
SNRNP40-206ENST00000489853 OR10J6PQ8NGY7 276 aa3.8□□□□□ -1.8
SNRNP40-206ENST00000489853 RASL10AQ92737 203 aa3.8□□□□□ -1.8
SNRNP40-206ENST00000489853 FXYD5Q96DB9 178 aa3.8□□□□□ -1.8
SNRNP40-206ENST00000489853 ZNF714Q96N38 554 aa3.8□□□□□ -1.8
SNRNP40-206ENST00000489853 KIR2DL4Q99706 377 aa3.8□□□□□ -1.8
SNRNP40-206ENST00000489853 RASL11BQ9BPW5 248 aa3.8□□□□□ -1.8
SNRNP40-206ENST00000489853 SPANXCQ9NY87 97 aa3.8□□□□□ -1.8
SNRNP40-206ENST00000489853 FOXA2Q9Y261 457 aaPredicted RBP3.8□□□□□ -1.8
SNRNP40-206ENST00000489853 SIGLEC9Q9Y336 463 aa3.8□□□□□ -1.8
SNRNP40-206ENST00000489853 SPTBN4Q9H254 2564 aa3.79□□□□□ -1.8
SNRNP40-206ENST00000489853 IGKV1OR2-108A0A075B7D4 117 aa3.79□□□□□ -1.8
SNRNP40-206ENST00000489853 TRAV3A0A0B4J244 114 aa3.79□□□□□ -1.8
SNRNP40-206ENST00000489853 IGHV3-20A0A0C4DH32 117 aa3.79□□□□□ -1.8
SNRNP40-206ENST00000489853 MYMXA0A1B0GTQ4 84 aa3.79□□□□□ -1.8
SNRNP40-206ENST00000489853 LOC389332A0A1B0GUA5 103 aa3.79□□□□□ -1.8
SNRNP40-206ENST00000489853 PGPA6NDG6 321 aa3.79□□□□□ -1.8
SNRNP40-206ENST00000489853 LINC01546A6NGU7 62 aa3.79□□□□□ -1.8
SNRNP40-206ENST00000489853 SMIM9A6NGZ8 99 aa3.79□□□□□ -1.8
SNRNP40-206ENST00000489853 C15orf61A6NNL5 157 aa3.79□□□□□ -1.8
SNRNP40-206ENST00000489853 ATP5LO75964 103 aa3.79□□□□□ -1.8
SNRNP40-206ENST00000489853 DPM2O94777 84 aa3.79□□□□□ -1.8
SNRNP40-206ENST00000489853 PLA2G1BP04054 148 aaKnown RBP3.79□□□□□ -1.8
SNRNP40-206ENST00000489853 SCGB1C2P0DMR2 95 aa3.79□□□□□ -1.8
SNRNP40-206ENST00000489853 LINC00205P59089 165 aa3.79□□□□□ -1.8
SNRNP40-206ENST00000489853 C10orf113Q5VZT2 155 aa3.79□□□□□ -1.8
SNRNP40-206ENST00000489853 PDPNQ86YL7 162 aa3.79□□□□□ -1.8
SNRNP40-206ENST00000489853 CIARTQ8N365 385 aaPredicted RBP3.79□□□□□ -1.8
SNRNP40-206ENST00000489853 TMEM190Q8WZ59 177 aa3.79□□□□□ -1.8
SNRNP40-206ENST00000489853 TTTY13Q9BZ97 58 aa3.79□□□□□ -1.8
SNRNP40-206ENST00000489853 TMEM14BQ9NUH8 114 aa3.79□□□□□ -1.8
SNRNP40-206ENST00000489853 DKK4Q9UBT3 224 aa3.79□□□□□ -1.8
SNRNP40-206ENST00000489853 PRNDQ9UKY0 176 aa3.79□□□□□ -1.8
SNRNP40-206ENST00000489853 C2orf16Q68DN1 1984 aa3.79□□□□□ -1.8
SNRNP40-206ENST00000489853 VPS13AQ96RL7 3174 aa3.79□□□□□ -1.8
SNRNP40-206ENST00000489853 ZFHX2Q9C0A1 2572 aaPredicted RBP3.78□□□□□ -1.8
SNRNP40-206ENST00000489853 ABCA7Q8IZY2 2146 aa3.78□□□□□ -1.8
SNRNP40-206ENST00000489853 TRAV4A0A0B4J268 109 aa3.78□□□□□ -1.8
SNRNP40-206ENST00000489853 TRBV6-1A0A0K0K1D8 114 aa3.78□□□□□ -1.8
SNRNP40-206ENST00000489853 LILRA5A6NI73 299 aa3.78□□□□□ -1.8
SNRNP40-206ENST00000489853 COX7A2P2O60397 106 aa3.78□□□□□ -1.8
SNRNP40-206ENST00000489853 SS18L1O75177 396 aaPredicted RBP3.78□□□□□ -1.8
SNRNP40-206ENST00000489853 ZFAND5O76080 213 aa3.78□□□□□ -1.8
SNRNP40-206ENST00000489853 NPYP01303 97 aa3.78□□□□□ -1.8
SNRNP40-206ENST00000489853 PRSS1P07477 247 aa3.78□□□□□ -1.8
SNRNP40-206ENST00000489853 ARMS2P0C7Q2 107 aa3.78□□□□□ -1.8
SNRNP40-206ENST00000489853 PYYP10082 97 aa3.78□□□□□ -1.8
SNRNP40-206ENST00000489853 FCER1GP30273 86 aa3.78□□□□□ -1.8
SNRNP40-206ENST00000489853 TNFRSF4P43489 277 aa3.78□□□□□ -1.8
SNRNP40-206ENST00000489853 ZNF134P52741 427 aa3.78□□□□□ -1.8
SNRNP40-206ENST00000489853 FOXG1P55316 489 aaPredicted RBP3.78□□□□□ -1.8
SNRNP40-206ENST00000489853 UBE2D3P61077 147 aa3.78□□□□□ -1.8
SNRNP40-206ENST00000489853 UBE2D2P62837 147 aa3.78□□□□□ -1.8
SNRNP40-206ENST00000489853 GNG5P63218 68 aa3.78□□□□□ -1.8
SNRNP40-206ENST00000489853 TWIST1Q15672 202 aa3.78□□□□□ -1.8
SNRNP40-206ENST00000489853 MRPL23Q16540 153 aaKnown RBP3.78□□□□□ -1.8
SNRNP40-206ENST00000489853 TBC1D28Q2M2D7 210 aa3.78□□□□□ -1.8
SNRNP40-206ENST00000489853 C2orf83Q53S99 150 aa3.78□□□□□ -1.8
SNRNP40-206ENST00000489853 MORN5Q5VZ52 161 aa3.78□□□□□ -1.8
SNRNP40-206ENST00000489853 GTSCR1Q86UQ5 136 aa3.78□□□□□ -1.8
SNRNP40-206ENST00000489853 ORMDL3Q8N138 153 aa3.78□□□□□ -1.8
SNRNP40-206ENST00000489853 LRRC75A-AS1Q8N1F1 130 aa3.78□□□□□ -1.8
SNRNP40-206ENST00000489853 MAPKAPK5-AS1Q8N8E1 139 aa3.78□□□□□ -1.8
SNRNP40-206ENST00000489853 S1PR3Q99500 378 aa3.78□□□□□ -1.8
SNRNP40-206ENST00000489853 SPANXDQ9BXN6 97 aa3.78□□□□□ -1.8
SNRNP40-206ENST00000489853 PRRG4Q9BZD6 226 aa3.78□□□□□ -1.8
SNRNP40-206ENST00000489853 ADAMTS20P59510 1910 aa3.78□□□□□ -1.8
SNRNP40-206ENST00000489853 TANC2Q9HCD6 1990 aa3.78□□□□□ -1.8
SNRNP40-206ENST00000489853 CACNA1AO00555 2505 aa3.78□□□□□ -1.8
SNRNP40-206ENST00000489853 EML6Q6ZMW3 1958 aa3.78□□□□□ -1.81
SNRNP40-206ENST00000489853 A0A0J9YW62 118 aa3.78□□□□□ -1.81
SNRNP40-206ENST00000489853 A4D1N5 150 aa3.78□□□□□ -1.81
SNRNP40-206ENST00000489853 D6R8Y8 96 aa3.78□□□□□ -1.81
SNRNP40-206ENST00000489853 K7EMI3 77 aa3.78□□□□□ -1.81
SNRNP40-206ENST00000489853 PROP1O75360 226 aa3.78□□□□□ -1.81
SNRNP40-206ENST00000489853 ZC2HC1BQ5TFG8 222 aa3.78□□□□□ -1.81
SNRNP40-206ENST00000489853 FAM104BQ5XKR9 115 aa3.78□□□□□ -1.81
SNRNP40-206ENST00000489853 FAM53AQ6NSI3 398 aaPredicted RBP3.78□□□□□ -1.81
SNRNP40-206ENST00000489853 RPS19BP1Q86WX3 136 aaKnown RBP3.78□□□□□ -1.81
SNRNP40-206ENST00000489853 TUSC5Q8IXB3 177 aa3.78□□□□□ -1.81
SNRNP40-206ENST00000489853 VKORC1L1Q8N0U8 176 aa3.78□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms