RNA–Protein interactions for RNA: ENST00000489274.1

NINJ1-204, Transcript of ninjurin 1, humanhuman

TSL 2

Gene NINJ1, Length 2,026 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NINJ1-204ENST00000489274 CLPSL1A2RUU4 121 aa11.27□□□□□ -0.61
NINJ1-204ENST00000489274 BUB3O43684 328 aa11.27□□□□□ -0.61
NINJ1-204ENST00000489274 CA1P00915 261 aaPredicted RBP11.27□□□□□ -0.61
NINJ1-204ENST00000489274 TCL1AP56279 114 aa11.27□□□□□ -0.61
NINJ1-204ENST00000489274 PSG3Q16557 428 aa11.27□□□□□ -0.61
NINJ1-204ENST00000489274 RASL11AQ6T310 242 aa11.27□□□□□ -0.61
NINJ1-204ENST00000489274 LINC00322Q6ZN03 302 aaPredicted RBP11.27□□□□□ -0.61
NINJ1-204ENST00000489274 MRPL18Q9H0U6 180 aaKnown RBP11.27□□□□□ -0.61
NINJ1-204ENST00000489274 GNB4Q9HAV0 340 aa11.27□□□□□ -0.61
NINJ1-204ENST00000489274 ZNF580Q9UK33 172 aa11.27□□□□□ -0.61
NINJ1-204ENST00000489274 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.27□□□□□ -0.613e-10■□□□□ 9.7
NINJ1-204ENST00000489274 IGHV3-35A0A0C4DH35 117 aa11.26□□□□□ -0.61
NINJ1-204ENST00000489274 RNF223E7ERA6 249 aa11.26□□□□□ -0.61
NINJ1-204ENST00000489274 BLCAPP62952 87 aa11.26□□□□□ -0.61
NINJ1-204ENST00000489274 C1orf194Q5T5A4 169 aa11.26□□□□□ -0.61
NINJ1-204ENST00000489274 PRNTQ86SH4 94 aa11.26□□□□□ -0.61
NINJ1-204ENST00000489274 USMG5Q96IX5 58 aa11.26□□□□□ -0.61
NINJ1-204ENST00000489274 NAT8BQ9UHF3 227 aa11.26□□□□□ -0.61
NINJ1-204ENST00000489274 PSG8Q9UQ74 426 aa11.26□□□□□ -0.61
NINJ1-204ENST00000489274 A0A087X0K7 114 aa11.26□□□□□ -0.61
NINJ1-204ENST00000489274 SNURFLB1AK76 121 aa11.26□□□□□ -0.61
NINJ1-204ENST00000489274 FRMD6-AS1P0C7T7 363 aa11.26□□□□□ -0.61
NINJ1-204ENST00000489274 IGHV4-31P0DP07 118 aa11.26□□□□□ -0.61
NINJ1-204ENST00000489274 CSN1S1P47710 185 aa11.26□□□□□ -0.61
NINJ1-204ENST00000489274 DEFB112Q30KQ8 113 aa11.26□□□□□ -0.61
NINJ1-204ENST00000489274 WIPF2Q8TF74 440 aaPredicted RBP11.26□□□□□ -0.61
NINJ1-204ENST00000489274 RPP21Q9H633 154 aaKnown RBP11.26□□□□□ -0.61
NINJ1-204ENST00000489274 NPIPB6E9PJ23 425 aa11.25□□□□□ -0.61
NINJ1-204ENST00000489274 M0R3E3 92 aa11.25□□□□□ -0.61
NINJ1-204ENST00000489274 FSHBP01225 129 aa11.25□□□□□ -0.61
NINJ1-204ENST00000489274 P01737 135 aa11.25□□□□□ -0.61
NINJ1-204ENST00000489274 PDZD11Q5EBL8 140 aa11.25□□□□□ -0.61
NINJ1-204ENST00000489274 TMEM136Q6ZRR5 245 aa11.25□□□□□ -0.61
NINJ1-204ENST00000489274 DAZAP1Q96EP5 407 aaKnown RBP11.25□□□□□ -0.61
NINJ1-204ENST00000489274 HIST1H2BLQ99880 126 aa11.25□□□□□ -0.61
NINJ1-204ENST00000489274 U3KQE9 123 aa11.25□□□□□ -0.61
NINJ1-204ENST00000489274 FBLL1A6NHQ2 334 aaKnown RBP11.25□□□□□ -0.61
NINJ1-204ENST00000489274 A8MWL6 223 aa11.25□□□□□ -0.61
NINJ1-204ENST00000489274 SPINK4O60575 86 aa11.25□□□□□ -0.61
NINJ1-204ENST00000489274 TPPP2P59282 170 aa11.25□□□□□ -0.61
NINJ1-204ENST00000489274 Q5PR19 223 aa11.25□□□□□ -0.61
NINJ1-204ENST00000489274 C16orf54Q6UWD8 224 aa11.25□□□□□ -0.61
NINJ1-204ENST00000489274 CIARTQ8N365 385 aaPredicted RBP11.25□□□□□ -0.61
NINJ1-204ENST00000489274 NUP35Q8NFH5 326 aa11.25□□□□□ -0.61
NINJ1-204ENST00000489274 OR4B1Q8NGF8 309 aa11.25□□□□□ -0.61
NINJ1-204ENST00000489274 OR10D4PQ8NGN7 298 aa11.25□□□□□ -0.61
NINJ1-204ENST00000489274 METTL26Q96S19 204 aa11.25□□□□□ -0.61
NINJ1-204ENST00000489274 UTP20O75691 2785 aaKnown RBP11.24□□□□□ -0.61
NINJ1-204ENST00000489274 IGHV3OR16-8A0A075B7F1 116 aa11.24□□□□□ -0.61
NINJ1-204ENST00000489274 FAM231BA6NCW3 169 aa11.24□□□□□ -0.61
NINJ1-204ENST00000489274 IGLV1-40P01703 118 aa11.24□□□□□ -0.61
NINJ1-204ENST00000489274 SLC35B1P78383 322 aa11.24□□□□□ -0.61
NINJ1-204ENST00000489274 PRSS57Q6UWY2 283 aa11.24□□□□□ -0.61
NINJ1-204ENST00000489274 C9orf139Q6ZV77 190 aa11.24□□□□□ -0.61
NINJ1-204ENST00000489274 MAPK1IP1LQ8NDC0 245 aa11.24□□□□□ -0.61
NINJ1-204ENST00000489274 NOL4LQ96MY1 436 aaPredicted RBP11.24□□□□□ -0.61
NINJ1-204ENST00000489274 NEU1Q99519 415 aa11.24□□□□□ -0.61
NINJ1-204ENST00000489274 GFRA4Q9GZZ7 299 aa11.24□□□□□ -0.61
NINJ1-204ENST00000489274 ZNF331Q9NQX6 463 aaPredicted RBP11.24□□□□□ -0.61
NINJ1-204ENST00000489274 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.23□□□□□ -0.61
NINJ1-204ENST00000489274 ZNF785A8K8V0 405 aa11.23□□□□□ -0.61
NINJ1-204ENST00000489274 HLA-DQA1P01909 254 aa11.23□□□□□ -0.61
NINJ1-204ENST00000489274 FABP4P15090 132 aa11.23□□□□□ -0.61
NINJ1-204ENST00000489274 CFHR3Q02985 330 aa11.23□□□□□ -0.61
NINJ1-204ENST00000489274 MRPL54Q6P161 138 aaKnown RBP11.23□□□□□ -0.61
NINJ1-204ENST00000489274 Q6ZS46 218 aa11.23□□□□□ -0.61
NINJ1-204ENST00000489274 HIGD1CA8MV81 97 aa11.23□□□□□ -0.61
NINJ1-204ENST00000489274 ARL3P36405 182 aa11.23□□□□□ -0.61
NINJ1-204ENST00000489274 ATP5L2Q7Z4Y8 100 aa11.23□□□□□ -0.61
NINJ1-204ENST00000489274 GBGT1Q8N5D6 347 aa11.23□□□□□ -0.61
NINJ1-204ENST00000489274 OR5R1Q8NH85 324 aa11.23□□□□□ -0.61
NINJ1-204ENST00000489274 PTPN13Q12923 2485 aa11.22□□□□□ -0.61
NINJ1-204ENST00000489274 ANKRD17O75179 2603 aaKnown RBP11.22□□□□□ -0.61
NINJ1-204ENST00000489274 IGHV4-59P01825 116 aa11.22□□□□□ -0.61
NINJ1-204ENST00000489274 IGHG4P01861 327 aa11.22□□□□□ -0.61
NINJ1-204ENST00000489274 COX8CQ7Z4L0 72 aa11.22□□□□□ -0.61
NINJ1-204ENST00000489274 ZC2HC1AQ96GY0 325 aa11.22□□□□□ -0.61
NINJ1-204ENST00000489274 FBN2P35556 2912 aa11.22□□□□□ -0.61
NINJ1-204ENST00000489274 SVEP1Q4LDE5 3571 aa11.21□□□□□ -0.61
NINJ1-204ENST00000489274 AMBPP02760 352 aa11.21□□□□□ -0.61
NINJ1-204ENST00000489274 Q0VG73 95 aa11.21□□□□□ -0.61
NINJ1-204ENST00000489274 PACRGQ96M98 296 aaPredicted RBP11.21□□□□□ -0.61
NINJ1-204ENST00000489274 USP9YO00507 2555 aaPredicted RBP11.21□□□□□ -0.61
NINJ1-204ENST00000489274 A0A0G2JLM5 398 aa11.21□□□□□ -0.62
NINJ1-204ENST00000489274 NDUFA4O00483 81 aa11.21□□□□□ -0.62
NINJ1-204ENST00000489274 CHEK1O14757 476 aa11.21□□□□□ -0.62
NINJ1-204ENST00000489274 CRISP2P16562 243 aa11.21□□□□□ -0.62
NINJ1-204ENST00000489274 PYY3Q5JQD4 70 aa11.21□□□□□ -0.62
NINJ1-204ENST00000489274 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.21□□□□□ -0.62
NINJ1-204ENST00000489274 SLC50A1Q9BRV3 221 aa11.21□□□□□ -0.62
NINJ1-204ENST00000489274 KLK15Q9H2R5 256 aa11.21□□□□□ -0.62
NINJ1-204ENST00000489274 A0A1B0GXF2 115 aa11.2□□□□□ -0.62
NINJ1-204ENST00000489274 APOHP02749 345 aaPredicted RBP11.2□□□□□ -0.62
NINJ1-204ENST00000489274 PF4V1P10720 104 aa11.2□□□□□ -0.62
NINJ1-204ENST00000489274 FOXA3P55318 350 aaPredicted RBP11.2□□□□□ -0.62
NINJ1-204ENST00000489274 RAB4BP61018 213 aa11.2□□□□□ -0.62
NINJ1-204ENST00000489274 SAPCD1Q5SSQ6 148 aa11.2□□□□□ -0.62
NINJ1-204ENST00000489274 KRTAP1-3Q8IUG1 177 aa11.2□□□□□ -0.62
NINJ1-204ENST00000489274 GTSF1Q8WW33 167 aa11.2□□□□□ -0.62
NINJ1-204ENST00000489274 NIT2Q9NQR4 276 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms