RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 SPINK4O60575 86 aa15.8■□□□□ 0.12
HPS3-206ENST00000486530 RAB9AP51151 201 aa15.8■□□□□ 0.12
HPS3-206ENST00000486530 ATP5G2Q06055 141 aa15.8■□□□□ 0.12
HPS3-206ENST00000486530 LY6EQ16553 131 aa15.8■□□□□ 0.12
HPS3-206ENST00000486530 C9orf152Q5JTZ5 239 aa15.8■□□□□ 0.12
HPS3-206ENST00000486530 RASL11AQ6T310 242 aa15.8■□□□□ 0.12
HPS3-206ENST00000486530 CLEC19AQ6UXS0 136 aa15.8■□□□□ 0.12
HPS3-206ENST00000486530 RPP21Q9H633 154 aaKnown RBP15.8■□□□□ 0.12
HPS3-206ENST00000486530 GNB4Q9HAV0 340 aa15.8■□□□□ 0.12
HPS3-206ENST00000486530 NIT2Q9NQR4 276 aa15.8■□□□□ 0.12
HPS3-206ENST00000486530 SOX21Q9Y651 276 aaPredicted RBP15.8■□□□□ 0.12
HPS3-206ENST00000486530 CSMD2Q7Z408 3487 aa15.8■□□□□ 0.12
HPS3-206ENST00000486530 DIRC3C9JPN6 131 aa15.8■□□□□ 0.12
HPS3-206ENST00000486530 AVPP01185 164 aa15.8■□□□□ 0.12
HPS3-206ENST00000486530 FRMD6-AS1P0C7T7 363 aa15.8■□□□□ 0.12
HPS3-206ENST00000486530 SLC35B1P78383 322 aa15.8■□□□□ 0.12
HPS3-206ENST00000486530 TMEM136Q6ZRR5 245 aa15.8■□□□□ 0.12
HPS3-206ENST00000486530 PRNTQ86SH4 94 aa15.8■□□□□ 0.12
HPS3-206ENST00000486530 LRRC75A-AS1Q8N1F1 130 aa15.8■□□□□ 0.12
HPS3-206ENST00000486530 PRSS22Q9GZN4 317 aa15.8■□□□□ 0.12
HPS3-206ENST00000486530 HELZ2Q9BYK8 2649 aaKnown RBP15.79■□□□□ 0.12
HPS3-206ENST00000486530 SERTM2A0A1B0GWG4 89 aa15.79■□□□□ 0.12
HPS3-206ENST00000486530 ZNF253O75346 499 aa15.79■□□□□ 0.12
HPS3-206ENST00000486530 P01737 135 aa15.79■□□□□ 0.12
HPS3-206ENST00000486530 HLA-DQA1P01909 254 aa15.79■□□□□ 0.12
HPS3-206ENST00000486530 PSG3Q16557 428 aa15.79■□□□□ 0.12
HPS3-206ENST00000486530 PYY3Q5JQD4 70 aa15.79■□□□□ 0.12
HPS3-206ENST00000486530 MRPL54Q6P161 138 aaKnown RBP15.79■□□□□ 0.12
HPS3-206ENST00000486530 ARL6IP6Q8N6S5 226 aa15.79■□□□□ 0.12
HPS3-206ENST00000486530 DAZAP1Q96EP5 407 aaKnown RBP15.79■□□□□ 0.12
HPS3-206ENST00000486530 ZFP30Q9Y2G7 519 aa15.79■□□□□ 0.12
HPS3-206ENST00000486530 DOPEY2Q9Y3R5 2298 aa15.79■□□□□ 0.12
HPS3-206ENST00000486530 PTPN13Q12923 2485 aa15.79■□□□□ 0.12
HPS3-206ENST00000486530 IGHV3-35A0A0C4DH35 117 aa15.78■□□□□ 0.12
HPS3-206ENST00000486530 J3QLI3 93 aa15.78■□□□□ 0.12
HPS3-206ENST00000486530 IGHG2P01859 326 aa15.78■□□□□ 0.12
HPS3-206ENST00000486530 AMBPP02760 352 aa15.78■□□□□ 0.12
HPS3-206ENST00000486530 RELQ04864 619 aaPredicted RBP15.78■□□□□ 0.12
HPS3-206ENST00000486530 WIPF2Q8TF74 440 aaPredicted RBP15.78■□□□□ 0.12
HPS3-206ENST00000486530 ZNF331Q9NQX6 463 aaPredicted RBP15.78■□□□□ 0.12
HPS3-206ENST00000486530 ANKRD17O75179 2603 aaKnown RBP15.78■□□□□ 0.12
HPS3-206ENST00000486530 CSN1S1P47710 185 aa15.78■□□□□ 0.12
HPS3-206ENST00000486530 S100A12P80511 92 aa15.78■□□□□ 0.12
HPS3-206ENST00000486530 LINC00322Q6ZN03 302 aaPredicted RBP15.78■□□□□ 0.12
HPS3-206ENST00000486530 NUP35Q8NFH5 326 aa15.78■□□□□ 0.12
HPS3-206ENST00000486530 NEU1Q99519 415 aa15.78■□□□□ 0.12
HPS3-206ENST00000486530 PSG8Q9UQ74 426 aa15.78■□□□□ 0.12
HPS3-206ENST00000486530 A8MWL6 223 aa15.77■□□□□ 0.11
HPS3-206ENST00000486530 H3BUA1 57 aa15.77■□□□□ 0.11
HPS3-206ENST00000486530 BRI3O95415 125 aa15.77■□□□□ 0.11
HPS3-206ENST00000486530 LINC00527Q9UJ94 153 aa15.77■□□□□ 0.11
HPS3-206ENST00000486530 POLQO75417 2590 aa15.76■□□□□ 0.11
HPS3-206ENST00000486530 HIGD1CA8MV81 97 aa15.76■□□□□ 0.11
HPS3-206ENST00000486530 NPIPB6E9PJ23 425 aa15.76■□□□□ 0.11
HPS3-206ENST00000486530 M0R3E3 92 aa15.76■□□□□ 0.11
HPS3-206ENST00000486530 TRGV3P03979 118 aa15.76■□□□□ 0.11
HPS3-206ENST00000486530 CRISP2P16562 243 aa15.76■□□□□ 0.11
HPS3-206ENST00000486530 LOXL1Q08397 574 aaPredicted RBP15.76■□□□□ 0.11
HPS3-206ENST00000486530 CIARTQ8N365 385 aaPredicted RBP15.76■□□□□ 0.11
HPS3-206ENST00000486530 GBGT1Q8N5D6 347 aa15.76■□□□□ 0.11
HPS3-206ENST00000486530 OR4B1Q8NGF8 309 aa15.76■□□□□ 0.11
HPS3-206ENST00000486530 IGHV3OR16-8A0A075B7F1 116 aa15.76■□□□□ 0.11
HPS3-206ENST00000486530 RAB4BP61018 213 aa15.76■□□□□ 0.11
HPS3-206ENST00000486530 ATP5L2Q7Z4Y8 100 aa15.76■□□□□ 0.11
HPS3-206ENST00000486530 TMEM18Q96B42 140 aa15.76■□□□□ 0.11
HPS3-206ENST00000486530 GFRA4Q9GZZ7 299 aa15.76■□□□□ 0.11
HPS3-206ENST00000486530 SMAD5-AS1Q9Y6J3 95 aa15.76■□□□□ 0.11
HPS3-206ENST00000486530 CENPEQ02224 2701 aa15.76■□□□□ 0.11
HPS3-206ENST00000486530 BUB3O43684 328 aa15.75■□□□□ 0.11
HPS3-206ENST00000486530 A0A087X0K7 114 aa15.74■□□□□ 0.11
HPS3-206ENST00000486530 GRIFINA4D1Z8 144 aa15.74■□□□□ 0.11
HPS3-206ENST00000486530 RNF223E7ERA6 249 aa15.74■□□□□ 0.11
HPS3-206ENST00000486530 MAPK1IP1LQ8NDC0 245 aa15.74■□□□□ 0.11
HPS3-206ENST00000486530 CLPSL1A2RUU4 121 aa15.74■□□□□ 0.11
HPS3-206ENST00000486530 FAM231BA6NCW3 169 aa15.74■□□□□ 0.11
HPS3-206ENST00000486530 PPIFP30405 207 aaKnown RBP15.74■□□□□ 0.11
HPS3-206ENST00000486530 TPPP2P59282 170 aa15.74■□□□□ 0.11
HPS3-206ENST00000486530 DNLZQ5SXM8 178 aa15.74■□□□□ 0.11
HPS3-206ENST00000486530 C1orf194Q5T5A4 169 aa15.74■□□□□ 0.11
HPS3-206ENST00000486530 METTL26Q96S19 204 aa15.74■□□□□ 0.11
HPS3-206ENST00000486530 FBLL1A6NHQ2 334 aaKnown RBP15.73■□□□□ 0.11
HPS3-206ENST00000486530 Q0VG73 95 aa15.73■□□□□ 0.11
HPS3-206ENST00000486530 Q5PR19 223 aa15.73■□□□□ 0.11
HPS3-206ENST00000486530 ZC2HC1AQ96GY0 325 aa15.73■□□□□ 0.11
HPS3-206ENST00000486530 MAP1AP78559 2803 aaPredicted RBP15.72■□□□□ 0.11
HPS3-206ENST00000486530 TGFAP01135 160 aa15.72■□□□□ 0.11
HPS3-206ENST00000486530 C16orf54Q6UWD8 224 aa15.72■□□□□ 0.11
HPS3-206ENST00000486530 KRTAP1-3Q8IUG1 177 aa15.72■□□□□ 0.11
HPS3-206ENST00000486530 TMEM256Q8N2U0 113 aa15.72■□□□□ 0.11
HPS3-206ENST00000486530 USMG5Q96IX5 58 aa15.72■□□□□ 0.11
HPS3-206ENST00000486530 NOL4LQ96MY1 436 aaPredicted RBP15.72■□□□□ 0.11
HPS3-206ENST00000486530 A0A1B0GUS0 222 aa15.71■□□□□ 0.11
HPS3-206ENST00000486530 TCF24Q7RTU0 167 aa15.71■□□□□ 0.11
HPS3-206ENST00000486530 A0A1B0GXF2 115 aa15.71■□□□□ 0.11
HPS3-206ENST00000486530 APCSP02743 223 aa15.71■□□□□ 0.11
HPS3-206ENST00000486530 BLCAPP62952 87 aa15.71■□□□□ 0.11
HPS3-206ENST00000486530 TP53TG3Q9ULZ0 132 aa15.71■□□□□ 0.11
HPS3-206ENST00000486530 ABCA12Q86UK0 2595 aa15.7■□□□□ 0.1
HPS3-206ENST00000486530 ZNF785A8K8V0 405 aa15.7■□□□□ 0.1
HPS3-206ENST00000486530 CHEK1O14757 476 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms