RNA–Protein interactions for RNA: ENST00000481991.1

USP54-213, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 3

Gene USP54, Length 403 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-213ENST00000481991 RAP2BP61225 183 aa5.13□□□□□ -1.59
USP54-213ENST00000481991 RAB11AP62491 216 aa5.13□□□□□ -1.59
USP54-213ENST00000481991 DAZ2Q13117 558 aaKnown RBP5.13□□□□□ -1.59
USP54-213ENST00000481991 SLAQ13239 276 aa5.13□□□□□ -1.59
USP54-213ENST00000481991 GFI1BQ5VTD9 330 aa5.13□□□□□ -1.59
USP54-213ENST00000481991 SELENOHQ8IZQ5 122 aaKnown RBP5.13□□□□□ -1.59
USP54-213ENST00000481991 ZBTB8BQ8NAP8 495 aaPredicted RBP5.13□□□□□ -1.59
USP54-213ENST00000481991 BPIFCQ8NFQ6 507 aa5.13□□□□□ -1.59
USP54-213ENST00000481991 OR4D5Q8NGN0 318 aa5.13□□□□□ -1.59
USP54-213ENST00000481991 DTD1Q8TEA8 209 aa5.13□□□□□ -1.59
USP54-213ENST00000481991 IL22RA2Q969J5 263 aa5.13□□□□□ -1.59
USP54-213ENST00000481991 C20orf144Q9BQM9 153 aa5.13□□□□□ -1.59
USP54-213ENST00000481991 DPH3P1Q9H4G8 78 aa5.13□□□□□ -1.59
USP54-213ENST00000481991 BLOC1S6Q9UL45 172 aa5.13□□□□□ -1.59
USP54-213ENST00000481991 ANAPC10Q9UM13 185 aa5.13□□□□□ -1.59
USP54-213ENST00000481991 KLF12Q9Y4X4 402 aa5.13□□□□□ -1.59
USP54-213ENST00000481991 HMCN2Q8NDA2 5059 aa5.13□□□□□ -1.59
USP54-213ENST00000481991 IGHV3-30P01768 117 aa5.12□□□□□ -1.59
USP54-213ENST00000481991 IGHV3-33P01772 117 aa5.12□□□□□ -1.59
USP54-213ENST00000481991 SULT1A3P0DMM9 295 aa5.12□□□□□ -1.59
USP54-213ENST00000481991 SULT1A4P0DMN0 295 aa5.12□□□□□ -1.59
USP54-213ENST00000481991 IGHV3-30-3P0DP02 117 aa5.12□□□□□ -1.59
USP54-213ENST00000481991 IGHV3-30-5P0DP03 117 aa5.12□□□□□ -1.59
USP54-213ENST00000481991 TNFSF8P32971 234 aa5.12□□□□□ -1.59
USP54-213ENST00000481991 CRYBA4P53673 196 aa5.12□□□□□ -1.59
USP54-213ENST00000481991 AQP4P55087 323 aa5.12□□□□□ -1.59
USP54-213ENST00000481991 RPL37AP61513 92 aaKnown RBP5.12□□□□□ -1.59
USP54-213ENST00000481991 RNASE10Q5GAN6 216 aaKnown RBP5.12□□□□□ -1.59
USP54-213ENST00000481991 MARCH1Q8TCQ1 289 aa5.12□□□□□ -1.59
USP54-213ENST00000481991 TMEM222Q9H0R3 208 aa5.12□□□□□ -1.59
USP54-213ENST00000481991 MRPL16Q9NX20 251 aaKnown RBP5.12□□□□□ -1.59
USP54-213ENST00000481991 C14orf166Q9Y224 244 aaKnown RBP5.12□□□□□ -1.59
USP54-213ENST00000481991 SMCO3A2RU48 225 aa5.11□□□□□ -1.59
USP54-213ENST00000481991 K7EQD1 137 aa5.11□□□□□ -1.59
USP54-213ENST00000481991 CDS2O95674 445 aa5.11□□□□□ -1.59
USP54-213ENST00000481991 IAPPP10997 89 aa5.11□□□□□ -1.59
USP54-213ENST00000481991 RPL7P18124 248 aaKnown RBP5.11□□□□□ -1.59
USP54-213ENST00000481991 LEPP41159 167 aa5.11□□□□□ -1.59
USP54-213ENST00000481991 PPT1P50897 306 aa5.11□□□□□ -1.59
USP54-213ENST00000481991 LRTM2Q8N967 370 aa5.11□□□□□ -1.59
USP54-213ENST00000481991 OR13C8Q8NGS7 320 aa5.11□□□□□ -1.59
USP54-213ENST00000481991 OR1S1Q8NH92 325 aa5.11□□□□□ -1.59
USP54-213ENST00000481991 LHFPL5Q8TAF8 219 aa5.11□□□□□ -1.59
USP54-213ENST00000481991 GPX8Q8TED1 209 aa5.11□□□□□ -1.59
USP54-213ENST00000481991 PYGO2Q9BRQ0 406 aa5.11□□□□□ -1.59
USP54-213ENST00000481991 CHAC1Q9BUX1 264 aa5.11□□□□□ -1.59
USP54-213ENST00000481991 MRPL32Q9BYC8 188 aaKnown RBP5.11□□□□□ -1.59
USP54-213ENST00000481991 PRR13Q9NZ81 148 aa5.11□□□□□ -1.59
USP54-213ENST00000481991 COMMD3Q9UBI1 195 aa5.11□□□□□ -1.59
USP54-213ENST00000481991 CACFD1Q9UGQ2 172 aa5.11□□□□□ -1.59
USP54-213ENST00000481991 HIGD1AQ9Y241 93 aa5.11□□□□□ -1.59
USP54-213ENST00000481991 IGHV3-38A0A0C4DH36 116 aa5.1□□□□□ -1.59
USP54-213ENST00000481991 PRAC2D3DTV9 90 aa5.1□□□□□ -1.59
USP54-213ENST00000481991 H3BTX0 84 aa5.1□□□□□ -1.59
USP54-213ENST00000481991 HYPMO75409 117 aa5.1□□□□□ -1.59
USP54-213ENST00000481991 B3GALNT1O75752 331 aa5.1□□□□□ -1.59
USP54-213ENST00000481991 CCNKO75909 580 aa5.1□□□□□ -1.59
USP54-213ENST00000481991 IGLV2-11P01706 119 aa5.1□□□□□ -1.59
USP54-213ENST00000481991 CD3DP04234 171 aa5.1□□□□□ -1.59
USP54-213ENST00000481991 IL5P05113 134 aa5.1□□□□□ -1.59
USP54-213ENST00000481991 RNASE4P34096 147 aaKnown RBP5.1□□□□□ -1.59
USP54-213ENST00000481991 AKR1C1Q04828 323 aa5.1□□□□□ -1.59
USP54-213ENST00000481991 FHL2Q14192 279 aa5.1□□□□□ -1.59
USP54-213ENST00000481991 ACOT6Q3I5F7 207 aaPredicted RBP5.1□□□□□ -1.59
USP54-213ENST00000481991 LINC01559Q495D7 138 aa5.1□□□□□ -1.59
USP54-213ENST00000481991 GPR107Q5VW38 600 aa5.1□□□□□ -1.59
USP54-213ENST00000481991 TMEM182Q6ZP80 229 aaPredicted RBP5.1□□□□□ -1.59
USP54-213ENST00000481991 Q6ZSA8 131 aa5.1□□□□□ -1.59
USP54-213ENST00000481991 NHLRC2Q8NBF2 726 aa5.1□□□□□ -1.59
USP54-213ENST00000481991 ZNF680Q8NEM1 530 aa5.1□□□□□ -1.59
USP54-213ENST00000481991 TERB2Q8NHR7 220 aa5.1□□□□□ -1.59
USP54-213ENST00000481991 CIRBP-AS1Q8TBR5 109 aa5.1□□□□□ -1.59
USP54-213ENST00000481991 ZNF431Q8TF32 576 aaPredicted RBP5.1□□□□□ -1.59
USP54-213ENST00000481991 GLYATL2Q8WU03 294 aa5.1□□□□□ -1.59
USP54-213ENST00000481991 BLNKQ8WV28 456 aa5.1□□□□□ -1.59
USP54-213ENST00000481991 ST6GAL2Q96JF0 529 aa5.1□□□□□ -1.59
USP54-213ENST00000481991 TM2D2Q9BX73 214 aa5.1□□□□□ -1.59
USP54-213ENST00000481991 SLC45A2Q9UMX9 530 aa5.1□□□□□ -1.59
USP54-213ENST00000481991 IGKV1OR2-108A0A075B7D4 117 aa5.09□□□□□ -1.59
USP54-213ENST00000481991 TRAV8-6A0A0B4J262 113 aa5.09□□□□□ -1.59
USP54-213ENST00000481991 LOC100996750A0A140TA64 210 aa5.09□□□□□ -1.59
USP54-213ENST00000481991 PMS2P5A8MQ11 134 aa5.09□□□□□ -1.59
USP54-213ENST00000481991 IBA57-AS1B1ANH7 110 aa5.09□□□□□ -1.59
USP54-213ENST00000481991 FAM25AB3EWG3 89 aa5.09□□□□□ -1.59
USP54-213ENST00000481991 FAM25CB3EWG5 89 aa5.09□□□□□ -1.59
USP54-213ENST00000481991 FAM25GB3EWG6 89 aa5.09□□□□□ -1.59
USP54-213ENST00000481991 RGS13O14921 159 aa5.09□□□□□ -1.59
USP54-213ENST00000481991 GAS8-AS1O95177 125 aa5.09□□□□□ -1.59
USP54-213ENST00000481991 SFTA3P0C7M3 94 aa5.09□□□□□ -1.59
USP54-213ENST00000481991 CT45A10P0DMU9 189 aa5.09□□□□□ -1.59
USP54-213ENST00000481991 AKR1C4P17516 323 aa5.09□□□□□ -1.59
USP54-213ENST00000481991 TGFBR1P36897 503 aa5.09□□□□□ -1.59
USP54-213ENST00000481991 LSM3P62310 102 aaKnown RBP5.09□□□□□ -1.59
USP54-213ENST00000481991 WFDC2Q14508 124 aa5.09□□□□□ -1.59
USP54-213ENST00000481991 SMCO1Q147U7 214 aa5.09□□□□□ -1.59
USP54-213ENST00000481991 AARDQ4LEZ3 155 aa5.09□□□□□ -1.59
USP54-213ENST00000481991 OR10J3Q5JRS4 329 aa5.09□□□□□ -1.59
USP54-213ENST00000481991 ACOT7LQ6ZUV0 252 aa5.09□□□□□ -1.59
USP54-213ENST00000481991 CROCCP3Q8IVE0 287 aa5.09□□□□□ -1.59
USP54-213ENST00000481991 BAALCQ8WXS3 180 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms