RNA–Protein interactions for RNA: ENST00000473062.1

CLCC1-208, Transcript of chloride channel CLIC like 1, humanhuman

TSL 3

Gene CLCC1, Length 319 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-208ENST00000473062 TMED4Q7Z7H5 227 aa0.49□□□□□ -2.33
CLCC1-208ENST00000473062 NUP35Q8NFH5 326 aa0.49□□□□□ -2.33
CLCC1-208ENST00000473062 PXT1Q8NFP0 134 aa0.49□□□□□ -2.33
CLCC1-208ENST00000473062 PRNDQ9UKY0 176 aa0.49□□□□□ -2.33
CLCC1-208ENST00000473062 RFX7Q2KHR2 1363 aa0.48□□□□□ -2.33
CLCC1-208ENST00000473062 UNC13CQ8NB66 2214 aa0.48□□□□□ -2.33
CLCC1-208ENST00000473062 ATP5HO75947 161 aa0.48□□□□□ -2.33
CLCC1-208ENST00000473062 CRHP06850 196 aa0.48□□□□□ -2.33
CLCC1-208ENST00000473062 PPP1R2P41236 205 aa0.48□□□□□ -2.33
CLCC1-208ENST00000473062 FOXA3P55318 350 aaPredicted RBP0.48□□□□□ -2.33
CLCC1-208ENST00000473062 MRPS15P82914 257 aaKnown RBP0.48□□□□□ -2.33
CLCC1-208ENST00000473062 PATE2Q6UY27 113 aa0.48□□□□□ -2.33
CLCC1-208ENST00000473062 NEK7Q8TDX7 302 aa0.48□□□□□ -2.33
CLCC1-208ENST00000473062 DGCR14Q96DF8 476 aaKnown RBP0.48□□□□□ -2.33
CLCC1-208ENST00000473062 GGACTQ9BVM4 153 aa0.48□□□□□ -2.33
CLCC1-208ENST00000473062 HEATR1Q9H583 2144 aaKnown RBP0.48□□□□□ -2.33
CLCC1-208ENST00000473062 STOML2Q9UJZ1 356 aa0.48□□□□□ -2.33
CLCC1-208ENST00000473062 E9PCH4 1651 aa0.48□□□□□ -2.33
CLCC1-208ENST00000473062 MUC5ACP98088 5654 aa0.48□□□□□ -2.33
CLCC1-208ENST00000473062 SCN8AQ9UQD0 1980 aa0.48□□□□□ -2.33
CLCC1-208ENST00000473062 NCAPD3P42695 1498 aa0.48□□□□□ -2.33
CLCC1-208ENST00000473062 MIA2Q96PC5 1412 aa0.47□□□□□ -2.33
CLCC1-208ENST00000473062 TRAV23DV6A0A075B6W5 121 aa0.47□□□□□ -2.33
CLCC1-208ENST00000473062 TRBV30A0A0K0K1B3 111 aa0.47□□□□□ -2.33
CLCC1-208ENST00000473062 RER1O15258 196 aa0.47□□□□□ -2.33
CLCC1-208ENST00000473062 PIAS1O75925 651 aa0.47□□□□□ -2.33
CLCC1-208ENST00000473062 IFNA1P01562 189 aa0.47□□□□□ -2.33
CLCC1-208ENST00000473062 TRGC2P03986 189 aa0.47□□□□□ -2.33
CLCC1-208ENST00000473062 TMBIM6P55061 237 aa0.47□□□□□ -2.33
CLCC1-208ENST00000473062 GNG5P63218 68 aa0.47□□□□□ -2.33
CLCC1-208ENST00000473062 POU6F1Q14863 301 aa0.47□□□□□ -2.33
CLCC1-208ENST00000473062 DHRS4L2Q6PKH6 230 aa0.47□□□□□ -2.33
CLCC1-208ENST00000473062 OR13C6PQ8NH95 151 aa0.47□□□□□ -2.33
CLCC1-208ENST00000473062 GRPEL2Q8TAA5 225 aa0.47□□□□□ -2.33
CLCC1-208ENST00000473062 Q8TAT8 98 aa0.47□□□□□ -2.33
CLCC1-208ENST00000473062 ZC2HC1AQ96GY0 325 aa0.47□□□□□ -2.33
CLCC1-208ENST00000473062 MCEEQ96PE7 176 aa0.47□□□□□ -2.33
CLCC1-208ENST00000473062 RTL8AQ9BWD3 113 aa0.47□□□□□ -2.33
CLCC1-208ENST00000473062 PLAC8Q9NZF1 115 aa0.47□□□□□ -2.33
CLCC1-208ENST00000473062 APCP25054 2843 aa0.46□□□□□ -2.34
CLCC1-208ENST00000473062 IGHV3-33P01772 117 aa0.46□□□□□ -2.34
CLCC1-208ENST00000473062 KDELR1P24390 212 aa0.46□□□□□ -2.34
CLCC1-208ENST00000473062 CAPZBP47756 277 aa0.46□□□□□ -2.34
CLCC1-208ENST00000473062 SPINK7P58062 85 aa0.46□□□□□ -2.34
CLCC1-208ENST00000473062 EIF3IQ13347 325 aaKnown RBP0.46□□□□□ -2.34
CLCC1-208ENST00000473062 K7EIL1 84 aa0.45□□□□□ -2.34
CLCC1-208ENST00000473062 CST7O76096 145 aa0.45□□□□□ -2.34
CLCC1-208ENST00000473062 TCTAP57738 103 aa0.45□□□□□ -2.34
CLCC1-208ENST00000473062 RPL19P84098 196 aaKnown RBP0.45□□□□□ -2.34
CLCC1-208ENST00000473062 HACD4Q5VWC8 232 aa0.45□□□□□ -2.34
CLCC1-208ENST00000473062 FAM216BQ8N7L0 139 aa0.45□□□□□ -2.34
CLCC1-208ENST00000473062 PAIP2Q9BPZ3 127 aaKnown RBP0.45□□□□□ -2.34
CLCC1-208ENST00000473062 CHD3Q12873 2000 aaKnown RBP0.44□□□□□ -2.34
CLCC1-208ENST00000473062 ZNF727A8MUV8 499 aa0.44□□□□□ -2.34
CLCC1-208ENST00000473062 IGLV1-51P01701 117 aa0.44□□□□□ -2.34
CLCC1-208ENST00000473062 RPL35P42766 123 aaKnown RBP0.44□□□□□ -2.34
CLCC1-208ENST00000473062 ARPP19P56211 112 aa0.44□□□□□ -2.34
CLCC1-208ENST00000473062 HBBP68871 147 aa0.44□□□□□ -2.34
CLCC1-208ENST00000473062 MRPS36P82909 103 aaKnown RBP0.44□□□□□ -2.34
CLCC1-208ENST00000473062 C1orf140Q5VVS0 124 aa0.44□□□□□ -2.34
CLCC1-208ENST00000473062 Q6ZQY7 126 aa0.44□□□□□ -2.34
CLCC1-208ENST00000473062 PHF5AQ7RTV0 110 aaKnown RBP0.44□□□□□ -2.34
CLCC1-208ENST00000473062 C5orf17Q8NAS9 161 aa0.44□□□□□ -2.34
CLCC1-208ENST00000473062 GPX7Q96SL4 187 aaPredicted RBP0.44□□□□□ -2.34
CLCC1-208ENST00000473062 OR2H1Q9GZK4 316 aa0.44□□□□□ -2.34
CLCC1-208ENST00000473062 CST11Q9H112 138 aa0.44□□□□□ -2.34
CLCC1-208ENST00000473062 NAV3Q8IVL0 2385 aa0.43□□□□□ -2.34
CLCC1-208ENST00000473062 ZNF462Q96JM2 2506 aa0.43□□□□□ -2.34
CLCC1-208ENST00000473062 CAMSAP2Q08AD1 1489 aa0.43□□□□□ -2.34
CLCC1-208ENST00000473062 CEP164Q9UPV0 1460 aa0.43□□□□□ -2.34
CLCC1-208ENST00000473062 TET1Q8NFU7 2136 aa0.43□□□□□ -2.34
CLCC1-208ENST00000473062 B4DSR2 109 aa0.43□□□□□ -2.34
CLCC1-208ENST00000473062 H3BQV1 296 aa0.43□□□□□ -2.34
CLCC1-208ENST00000473062 PFDN1O60925 122 aa0.43□□□□□ -2.34
CLCC1-208ENST00000473062 CCL4P13236 92 aa0.43□□□□□ -2.34
CLCC1-208ENST00000473062 ZNF137PP52743 207 aa0.43□□□□□ -2.34
CLCC1-208ENST00000473062 RTL8BQ17RB0 113 aa0.43□□□□□ -2.34
CLCC1-208ENST00000473062 FKBP1CQ5VVH2 108 aa0.43□□□□□ -2.34
CLCC1-208ENST00000473062 GLIPR1L1Q6UWM5 242 aa0.43□□□□□ -2.34
CLCC1-208ENST00000473062 C10orf111Q8N326 155 aa0.43□□□□□ -2.34
CLCC1-208ENST00000473062 GINS3Q9BRX5 216 aa0.43□□□□□ -2.34
CLCC1-208ENST00000473062 PCF11O94913 1555 aaKnown RBP0.43□□□□□ -2.34
CLCC1-208ENST00000473062 MUC4Q99102 2169 aa0.43□□□□□ -2.34
CLCC1-208ENST00000473062 KCPQ6ZWJ8 1503 aa0.43□□□□□ -2.34
CLCC1-208ENST00000473062 ZFC3H1O60293 1989 aaKnown RBP0.43□□□□□ -2.34
CLCC1-208ENST00000473062 CACNA1EQ15878 2313 aa0.42□□□□□ -2.34
CLCC1-208ENST00000473062 A0A0J9YY99 117 aa0.42□□□□□ -2.34
CLCC1-208ENST00000473062 C5orf67F2Z3F1 127 aa0.42□□□□□ -2.34
CLCC1-208ENST00000473062 CXCL1P09341 107 aa0.42□□□□□ -2.34
CLCC1-208ENST00000473062 INSL3P51460 131 aa0.42□□□□□ -2.34
CLCC1-208ENST00000473062 SNCBQ16143 134 aa0.42□□□□□ -2.34
CLCC1-208ENST00000473062 KRTAP21-1Q3LI58 79 aa0.42□□□□□ -2.34
CLCC1-208ENST00000473062 OCIAD2Q56VL3 154 aa0.42□□□□□ -2.34
CLCC1-208ENST00000473062 TMEM14EPQ6UXP3 125 aa0.42□□□□□ -2.34
CLCC1-208ENST00000473062 OR4B1Q8NGF8 309 aa0.42□□□□□ -2.34
CLCC1-208ENST00000473062 ISOC1Q96CN7 298 aa0.42□□□□□ -2.34
CLCC1-208ENST00000473062 AP1S3Q96PC3 154 aa0.42□□□□□ -2.34
CLCC1-208ENST00000473062 EFCAB11Q9BUY7 163 aa0.42□□□□□ -2.34
CLCC1-208ENST00000473062 TPRKBQ9Y3C4 175 aa0.42□□□□□ -2.34
CLCC1-208ENST00000473062 ALPK3Q96L96 1907 aa0.42□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms