RNA–Protein interactions for RNA: ENST00000471727.3

APLF-204, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best)

Gene APLF, Length 1,633 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-204ENST00000471727 CHCHD1Q96BP2 118 aaKnown RBP8.32□□□□□ -1.08
APLF-204ENST00000471727 AJUBAQ96IF1 538 aa8.32□□□□□ -1.08
APLF-204ENST00000471727 PGLYRP4Q96LB8 373 aa8.32□□□□□ -1.08
APLF-204ENST00000471727 C2orf88Q9BSF0 95 aa8.32□□□□□ -1.08
APLF-204ENST00000471727 NDFIP1Q9BT67 221 aa8.32□□□□□ -1.08
APLF-204ENST00000471727 VAMP8Q9BV40 100 aa8.32□□□□□ -1.08
APLF-204ENST00000471727 ZMAT5Q9UDW3 170 aaKnown RBP8.32□□□□□ -1.08
APLF-204ENST00000471727 IGF2RP11717 2491 aa8.31□□□□□ -1.08
APLF-204ENST00000471727 TRAV8-1A0A0A6YYK1 113 aa8.31□□□□□ -1.08
APLF-204ENST00000471727 A0A1B0GUT8 65 aa8.31□□□□□ -1.08
APLF-204ENST00000471727 VWC2LB2RUY7 222 aa8.31□□□□□ -1.08
APLF-204ENST00000471727 PAX8Q06710 450 aa8.31□□□□□ -1.08
APLF-204ENST00000471727 ZNF502Q8TBZ5 544 aa8.31□□□□□ -1.08
APLF-204ENST00000471727 C17orf77Q96MU5 243 aa8.31□□□□□ -1.08
APLF-204ENST00000471727 RCHY1Q96PM5 261 aa8.31□□□□□ -1.08
APLF-204ENST00000471727 TMUB1Q9BVT8 246 aa8.31□□□□□ -1.08
APLF-204ENST00000471727 A0A087X0K7 114 aa8.3□□□□□ -1.08
APLF-204ENST00000471727 TRBV7-1A0A0A6YYK4 115 aa8.3□□□□□ -1.08
APLF-204ENST00000471727 RPS20P60866 119 aaKnown RBP8.3□□□□□ -1.08
APLF-204ENST00000471727 KRTDAPP60985 99 aa8.3□□□□□ -1.08
APLF-204ENST00000471727 PMCHL1Q16048 86 aa8.3□□□□□ -1.08
APLF-204ENST00000471727 FBLN7Q53RD9 439 aa8.3□□□□□ -1.08
APLF-204ENST00000471727 EEF1AKMT3Q96AZ1 226 aa8.3□□□□□ -1.08
APLF-204ENST00000471727 ZC2HC1AQ96GY0 325 aa8.3□□□□□ -1.08
APLF-204ENST00000471727 PIMREGQ9BSJ6 248 aa8.3□□□□□ -1.08
APLF-204ENST00000471727 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.29□□□□□ -1.08
APLF-204ENST00000471727 OR2T8A6NH00 312 aa8.29□□□□□ -1.08
APLF-204ENST00000471727 SH2D7A6NKC9 451 aaPredicted RBP8.29□□□□□ -1.08
APLF-204ENST00000471727 M0QZK8 103 aa8.29□□□□□ -1.08
APLF-204ENST00000471727 BMI1P35226 326 aa8.29□□□□□ -1.08
APLF-204ENST00000471727 CRIP2P52943 208 aaPredicted RBP8.29□□□□□ -1.08
APLF-204ENST00000471727 SRSF2Q01130 221 aaKnown RBP8.29□□□□□ -1.08
APLF-204ENST00000471727 FAM120AOSQ5T036 256 aa8.29□□□□□ -1.08
APLF-204ENST00000471727 NIT1Q86X76 327 aa8.29□□□□□ -1.08
APLF-204ENST00000471727 MIEN1Q9BRT3 115 aa8.29□□□□□ -1.08
APLF-204ENST00000471727 CLEC5AQ9NY25 188 aa8.29□□□□□ -1.08
APLF-204ENST00000471727 LOC102724200A0A096LPH7 203 aaPredicted RBP8.29□□□□□ -1.08
APLF-204ENST00000471727 C20orf202A1L168 122 aa8.29□□□□□ -1.08
APLF-204ENST00000471727 C19orf84I3L1E1 186 aa8.29□□□□□ -1.08
APLF-204ENST00000471727 M0R2Z0 102 aa8.29□□□□□ -1.08
APLF-204ENST00000471727 IGHV4-39P01824 125 aa8.29□□□□□ -1.08
APLF-204ENST00000471727 APOHP02749 345 aaPredicted RBP8.29□□□□□ -1.08
APLF-204ENST00000471727 OR5AL1P0C617 328 aa8.29□□□□□ -1.08
APLF-204ENST00000471727 UQCRFS1P47985 274 aa8.29□□□□□ -1.08
APLF-204ENST00000471727 RHOGP84095 191 aa8.29□□□□□ -1.08
APLF-204ENST00000471727 RELQ04864 619 aaPredicted RBP8.29□□□□□ -1.08
APLF-204ENST00000471727 C15orf32Q32M92 178 aa8.29□□□□□ -1.08
APLF-204ENST00000471727 SLC50A1Q9BRV3 221 aa8.29□□□□□ -1.08
APLF-204ENST00000471727 SSBP4Q9BWG4 385 aaPredicted RBP8.29□□□□□ -1.08
APLF-204ENST00000471727 MEGF9Q9H1U4 602 aa8.29□□□□□ -1.08
APLF-204ENST00000471727 MOB4Q9Y3A3 225 aa8.29□□□□□ -1.08
APLF-204ENST00000471727 S4R3C0 116 aa8.29□□□□□ -1.08
APLF-204ENST00000471727 SMG1Q96Q15 3661 aaKnown RBP8.28□□□□□ -1.08
APLF-204ENST00000471727 RBAKDNA6NC62 111 aa8.28□□□□□ -1.08
APLF-204ENST00000471727 M0R143 59 aa8.28□□□□□ -1.08
APLF-204ENST00000471727 ATP6V0E1O15342 81 aa8.28□□□□□ -1.08
APLF-204ENST00000471727 BRI3O95415 125 aa8.28□□□□□ -1.08
APLF-204ENST00000471727 C3orf79P0CE67 100 aa8.28□□□□□ -1.08
APLF-204ENST00000471727 NTF3P20783 257 aa8.28□□□□□ -1.08
APLF-204ENST00000471727 ECSCRQ19T08 205 aa8.28□□□□□ -1.08
APLF-204ENST00000471727 KLHDC1Q8N7A1 406 aa8.28□□□□□ -1.08
APLF-204ENST00000471727 C5orf56Q8N8D9 126 aa8.28□□□□□ -1.08
APLF-204ENST00000471727 IGHV1-69DA0A0B4J2H0 117 aa8.27□□□□□ -1.09
APLF-204ENST00000471727 TMEM189A5PLL7 270 aa8.27□□□□□ -1.09
APLF-204ENST00000471727 FAM223BA6NKX1 122 aa8.27□□□□□ -1.09
APLF-204ENST00000471727 M0R3E3 92 aa8.27□□□□□ -1.09
APLF-204ENST00000471727 IGHV1-69P01742 117 aa8.27□□□□□ -1.09
APLF-204ENST00000471727 CLEC3BP05452 202 aa8.27□□□□□ -1.09
APLF-204ENST00000471727 RNASEKQ6P5S7 137 aaKnown RBP8.27□□□□□ -1.09
APLF-204ENST00000471727 ZNF493Q6ZR52 646 aa8.27□□□□□ -1.09
APLF-204ENST00000471727 FAM223AQ8IWN6 122 aa8.27□□□□□ -1.09
APLF-204ENST00000471727 Q8N976 141 aa8.27□□□□□ -1.09
APLF-204ENST00000471727 MRPL53Q96EL3 112 aaKnown RBP8.27□□□□□ -1.09
APLF-204ENST00000471727 KRTAP3-3Q9BYR6 98 aa8.27□□□□□ -1.09
APLF-204ENST00000471727 KRTAP3-2Q9BYR7 98 aa8.27□□□□□ -1.09
APLF-204ENST00000471727 FAM181BA6NEQ2 426 aa8.26□□□□□ -1.09
APLF-204ENST00000471727 ZNF785A8K8V0 405 aa8.26□□□□□ -1.09
APLF-204ENST00000471727 BUB3O43684 328 aa8.26□□□□□ -1.09
APLF-204ENST00000471727 IGHV3-23P01764 117 aa8.26□□□□□ -1.09
APLF-204ENST00000471727 LINC00614P0C842 121 aa8.26□□□□□ -1.09
APLF-204ENST00000471727 CD33P20138 364 aa8.26□□□□□ -1.09
APLF-204ENST00000471727 BTF3P20290 206 aaKnown RBP8.26□□□□□ -1.09
APLF-204ENST00000471727 GPR183P32249 361 aa8.26□□□□□ -1.09
APLF-204ENST00000471727 CRIP1P50238 77 aa8.26□□□□□ -1.09
APLF-204ENST00000471727 ATP5G2Q06055 141 aa8.26□□□□□ -1.09
APLF-204ENST00000471727 CLEC2AQ6UVW9 174 aa8.26□□□□□ -1.09
APLF-204ENST00000471727 FAM19A2Q8N3H0 131 aa8.26□□□□□ -1.09
APLF-204ENST00000471727 C10orf105Q8TEF2 133 aa8.26□□□□□ -1.09
APLF-204ENST00000471727 PRR25Q96S07 402 aa8.26□□□□□ -1.09
APLF-204ENST00000471727 CCL19Q99731 98 aa8.26□□□□□ -1.09
APLF-204ENST00000471727 ZFAND3Q9H8U3 227 aa8.26□□□□□ -1.09
APLF-204ENST00000471727 HIF1ANQ9NWT6 349 aa8.26□□□□□ -1.09
APLF-204ENST00000471727 SMAD5-AS1Q9Y6J3 95 aa8.26□□□□□ -1.09
APLF-204ENST00000471727 KALRNO60229 2985 aa8.26□□□□□ -1.09
APLF-204ENST00000471727 DCHS1Q96JQ0 3298 aa8.26□□□□□ -1.09
APLF-204ENST00000471727 H3BUA1 57 aa8.25□□□□□ -1.09
APLF-204ENST00000471727 DSCR9P59020 149 aa8.25□□□□□ -1.09
APLF-204ENST00000471727 SSTP61278 116 aa8.25□□□□□ -1.09
APLF-204ENST00000471727 METTL26Q96S19 204 aa8.25□□□□□ -1.09
APLF-204ENST00000471727 PAM16Q9Y3D7 125 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms