RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 RTTNQ86VV8 2226 aa2.74□□□□□ -1.97
SMC5-202ENST00000471372 FRMPD1Q5SYB0 1578 aa2.74□□□□□ -1.97
SMC5-202ENST00000471372 HIVEP2P31629 2446 aa2.73□□□□□ -1.97
SMC5-202ENST00000471372 TCRBV4S1A1TA0A5B7 111 aa2.73□□□□□ -1.97
SMC5-202ENST00000471372 ARPC4P59998 168 aa2.73□□□□□ -1.97
SMC5-202ENST00000471372 CDK6Q00534 326 aa2.73□□□□□ -1.97
SMC5-202ENST00000471372 CDK5R1Q15078 307 aa2.73□□□□□ -1.97
SMC5-202ENST00000471372 VMA21Q3ZAQ7 101 aa2.73□□□□□ -1.97
SMC5-202ENST00000471372 C1orf137Q5JT78 98 aa2.73□□□□□ -1.97
SMC5-202ENST00000471372 RAB37Q96AX2 223 aa2.73□□□□□ -1.97
SMC5-202ENST00000471372 CHCHD2Q9Y6H1 151 aaPredicted RBP2.73□□□□□ -1.97
SMC5-202ENST00000471372 FREM1Q5H8C1 2179 aa2.73□□□□□ -1.97
SMC5-202ENST00000471372 PIK3C2AO00443 1686 aa2.73□□□□□ -1.97
SMC5-202ENST00000471372 MYH10P35580 1976 aa2.72□□□□□ -1.97
SMC5-202ENST00000471372 HEATR5BQ9P2D3 2071 aa2.72□□□□□ -1.97
SMC5-202ENST00000471372 A0A1B0GX51 115 aa2.72□□□□□ -1.97
SMC5-202ENST00000471372 OR2T8A6NH00 312 aa2.72□□□□□ -1.97
SMC5-202ENST00000471372 DSCR4P56555 118 aaPredicted RBP2.72□□□□□ -1.97
SMC5-202ENST00000471372 C4orf22Q6V702 233 aa2.72□□□□□ -1.97
SMC5-202ENST00000471372 OR5H6Q8NGV6 325 aa2.72□□□□□ -1.97
SMC5-202ENST00000471372 MAFIPQ8WZ33 124 aa2.72□□□□□ -1.97
SMC5-202ENST00000471372 HYLS1Q96M11 299 aa2.72□□□□□ -1.97
SMC5-202ENST00000471372 GGACTQ9BVM4 153 aa2.72□□□□□ -1.97
SMC5-202ENST00000471372 CBLN4Q9NTU7 201 aa2.72□□□□□ -1.97
SMC5-202ENST00000471372 RASL12Q9NYN1 266 aa2.72□□□□□ -1.97
SMC5-202ENST00000471372 GSKIPQ9P0R6 139 aa2.72□□□□□ -1.97
SMC5-202ENST00000471372 TRBV6-8A0A0A6YYG3 113 aa2.71□□□□□ -1.98
SMC5-202ENST00000471372 TRAV13-1A0A0B4J241 112 aa2.71□□□□□ -1.98
SMC5-202ENST00000471372 TRBV7-6A0A0J9YX20 115 aa2.71□□□□□ -1.98
SMC5-202ENST00000471372 E7EUB6 86 aa2.71□□□□□ -1.98
SMC5-202ENST00000471372 SDC4P31431 198 aa2.71□□□□□ -1.98
SMC5-202ENST00000471372 PSG9Q00887 426 aa2.71□□□□□ -1.98
SMC5-202ENST00000471372 DIRC1Q969H9 104 aa2.71□□□□□ -1.98
SMC5-202ENST00000471372 SOX21Q9Y651 276 aaPredicted RBP2.71□□□□□ -1.98
SMC5-202ENST00000471372 NISCHQ9Y2I1 1504 aa2.71□□□□□ -1.98
SMC5-202ENST00000471372 TRBV27A0A0K0K1C4 114 aa2.7□□□□□ -1.98
SMC5-202ENST00000471372 H3BMG7 143 aa2.7□□□□□ -1.98
SMC5-202ENST00000471372 M0QZK8 103 aa2.7□□□□□ -1.98
SMC5-202ENST00000471372 CD2P06729 351 aa2.7□□□□□ -1.98
SMC5-202ENST00000471372 TMEM14EPQ6UXP3 125 aa2.7□□□□□ -1.98
SMC5-202ENST00000471372 OR8I2Q8N0Y5 310 aa2.7□□□□□ -1.98
SMC5-202ENST00000471372 ZNF563Q8TA94 476 aa2.7□□□□□ -1.98
SMC5-202ENST00000471372 BRK1Q8WUW1 75 aa2.7□□□□□ -1.98
SMC5-202ENST00000471372 PRELID3AQ96N28 172 aa2.7□□□□□ -1.98
SMC5-202ENST00000471372 OVOS2A0A0G2JMS6 1433 aa2.69□□□□□ -1.98
SMC5-202ENST00000471372 ANKRD31Q8N7Z5 1873 aa2.69□□□□□ -1.98
SMC5-202ENST00000471372 PCDH15Q96QU1 1955 aa2.69□□□□□ -1.98
SMC5-202ENST00000471372 TRAV10A0A0B4J240 114 aa2.69□□□□□ -1.98
SMC5-202ENST00000471372 hDV103S1A0JD37 113 aa2.69□□□□□ -1.98
SMC5-202ENST00000471372 CCDC160A6NGH7 325 aa2.69□□□□□ -1.98
SMC5-202ENST00000471372 CNBPP62633 177 aaKnown RBP2.69□□□□□ -1.98
SMC5-202ENST00000471372 CCDC153Q494R4 210 aa2.69□□□□□ -1.98
SMC5-202ENST00000471372 MUCL1Q96DR8 90 aa2.69□□□□□ -1.98
SMC5-202ENST00000471372 A2MP01023 1474 aa2.69□□□□□ -1.98
SMC5-202ENST00000471372 KRTAP5-8O75690 187 aa2.68□□□□□ -1.98
SMC5-202ENST00000471372 Q5XG85 94 aa2.68□□□□□ -1.98
SMC5-202ENST00000471372 OR4B1Q8NGF8 309 aa2.68□□□□□ -1.98
SMC5-202ENST00000471372 OR4C6Q8NH72 309 aa2.68□□□□□ -1.98
SMC5-202ENST00000471372 MCEEQ96PE7 176 aa2.68□□□□□ -1.98
SMC5-202ENST00000471372 A0A1B0GW64 132 aa2.67□□□□□ -1.98
SMC5-202ENST00000471372 HYPMO75409 117 aa2.67□□□□□ -1.98
SMC5-202ENST00000471372 TNFSF15O95150 251 aa2.67□□□□□ -1.98
SMC5-202ENST00000471372 CMPK1P30085 196 aa2.67□□□□□ -1.98
SMC5-202ENST00000471372 TEX261Q6UWH6 196 aa2.67□□□□□ -1.98
SMC5-202ENST00000471372 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.67□□□□□ -1.98
SMC5-202ENST00000471372 LRRC18Q8N456 261 aa2.67□□□□□ -1.98
SMC5-202ENST00000471372 Q8TAT8 98 aa2.67□□□□□ -1.98
SMC5-202ENST00000471372 TP53RKQ96S44 253 aa2.67□□□□□ -1.98
SMC5-202ENST00000471372 TAS2R7Q9NYW3 318 aa2.67□□□□□ -1.98
SMC5-202ENST00000471372 U3KQ87 197 aa2.67□□□□□ -1.98
SMC5-202ENST00000471372 COL11A1P12107 1806 aaPredicted RBP2.67□□□□□ -1.98
SMC5-202ENST00000471372 XIRP1Q702N8 1843 aaKnown RBP2.66□□□□□ -1.98
SMC5-202ENST00000471372 A0A087WSZ3 146 aa2.66□□□□□ -1.98
SMC5-202ENST00000471372 TMEM189A5PLL7 270 aa2.66□□□□□ -1.98
SMC5-202ENST00000471372 C9JAW5 83 aa2.66□□□□□ -1.98
SMC5-202ENST00000471372 LYRM1O43325 122 aa2.66□□□□□ -1.98
SMC5-202ENST00000471372 MRPS14O60783 128 aaKnown RBP2.66□□□□□ -1.98
SMC5-202ENST00000471372 ERC2-IT1O76042 136 aa2.66□□□□□ -1.98
SMC5-202ENST00000471372 FABP4P15090 132 aa2.66□□□□□ -1.98
SMC5-202ENST00000471372 CRYGSP22914 178 aa2.66□□□□□ -1.98
SMC5-202ENST00000471372 ZNF93P35789 620 aaPredicted RBP2.66□□□□□ -1.98
SMC5-202ENST00000471372 FOXA3P55318 350 aaPredicted RBP2.66□□□□□ -1.98
SMC5-202ENST00000471372 MRPS36P82909 103 aaKnown RBP2.66□□□□□ -1.98
SMC5-202ENST00000471372 LZICQ8WZA0 190 aa2.66□□□□□ -1.98
SMC5-202ENST00000471372 NAA38Q9BRA0 125 aaKnown RBP2.66□□□□□ -1.98
SMC5-202ENST00000471372 HIGD1AQ9Y241 93 aa2.66□□□□□ -1.98
SMC5-202ENST00000471372 TCOF1Q13428 1488 aaKnown RBP2.65□□□□□ -1.98
SMC5-202ENST00000471372 BORCS7-ASMTA0A0B4J1R7 106 aa2.65□□□□□ -1.99
SMC5-202ENST00000471372 ZNF736B4DX44 427 aaPredicted RBP2.65□□□□□ -1.99
SMC5-202ENST00000471372 C5orf67F2Z3F1 127 aa2.65□□□□□ -1.99
SMC5-202ENST00000471372 DPM2O94777 84 aa2.65□□□□□ -1.99
SMC5-202ENST00000471372 RPL22P35268 128 aaKnown RBP2.65□□□□□ -1.99
SMC5-202ENST00000471372 GTF2A1P52655 376 aaPredicted RBP2.65□□□□□ -1.99
SMC5-202ENST00000471372 SMCO1Q147U7 214 aa2.65□□□□□ -1.99
SMC5-202ENST00000471372 ZNF833PQ6ZTB9 187 aa2.65□□□□□ -1.99
SMC5-202ENST00000471372 MORN4Q8NDC4 146 aa2.65□□□□□ -1.99
SMC5-202ENST00000471372 SPANXCQ9NY87 97 aa2.65□□□□□ -1.99
SMC5-202ENST00000471372 TPRKBQ9Y3C4 175 aa2.65□□□□□ -1.99
SMC5-202ENST00000471372 MED12LQ86YW9 2145 aa2.65□□□□□ -1.99
SMC5-202ENST00000471372 TRAV27A0A087WT01 109 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms