RNA–Protein interactions for RNA: ENST00000471297.1

SMNDC1-204, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 823 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-204ENST00000471297 PRELID1Q9Y255 219 aa4.68□□□□□ -1.66
SMNDC1-204ENST00000471297 LY96Q9Y6Y9 160 aa4.68□□□□□ -1.66
SMNDC1-204ENST00000471297 CHD6Q8TD26 2715 aa4.68□□□□□ -1.66
SMNDC1-204ENST00000471297 SMG1Q96Q15 3661 aaKnown RBP4.67□□□□□ -1.66
SMNDC1-204ENST00000471297 TRBV19A0A075B6N1 114 aa4.67□□□□□ -1.66
SMNDC1-204ENST00000471297 A0A087WWC5 75 aa4.67□□□□□ -1.66
SMNDC1-204ENST00000471297 C7orf77A4D0Y5 90 aa4.67□□□□□ -1.66
SMNDC1-204ENST00000471297 PGPA6NDG6 321 aa4.67□□□□□ -1.66
SMNDC1-204ENST00000471297 HELTA6NFD8 242 aa4.67□□□□□ -1.66
SMNDC1-204ENST00000471297 K7EMT4 169 aa4.67□□□□□ -1.66
SMNDC1-204ENST00000471297 NDUFB4O95168 129 aa4.67□□□□□ -1.66
SMNDC1-204ENST00000471297 CRYBB3P26998 211 aa4.67□□□□□ -1.66
SMNDC1-204ENST00000471297 MYCNOSP40205 109 aa4.67□□□□□ -1.66
SMNDC1-204ENST00000471297 MEOX2P50222 304 aa4.67□□□□□ -1.66
SMNDC1-204ENST00000471297 TAS2R60P59551 318 aa4.67□□□□□ -1.66
SMNDC1-204ENST00000471297 PSG9Q00887 426 aa4.67□□□□□ -1.66
SMNDC1-204ENST00000471297 BTN1A1Q13410 526 aa4.67□□□□□ -1.66
SMNDC1-204ENST00000471297 PDE6HQ13956 83 aa4.67□□□□□ -1.66
SMNDC1-204ENST00000471297 KIAA0141Q14154 515 aaPredicted RBP4.67□□□□□ -1.66
SMNDC1-204ENST00000471297 ZNF674Q2M3X9 581 aa4.67□□□□□ -1.66
SMNDC1-204ENST00000471297 FAM106AQ4KMX7 169 aa4.67□□□□□ -1.66
SMNDC1-204ENST00000471297 AWAT1Q58HT5 328 aa4.67□□□□□ -1.66
SMNDC1-204ENST00000471297 ZNF329Q86UD4 541 aa4.67□□□□□ -1.66
SMNDC1-204ENST00000471297 GPHB5Q86YW7 130 aa4.67□□□□□ -1.66
SMNDC1-204ENST00000471297 OR8I2Q8N0Y5 310 aa4.67□□□□□ -1.66
SMNDC1-204ENST00000471297 MYOZ3Q8TDC0 251 aa4.67□□□□□ -1.66
SMNDC1-204ENST00000471297 BLNKQ8WV28 456 aa4.67□□□□□ -1.66
SMNDC1-204ENST00000471297 ZNF414Q96IQ9 312 aa4.67□□□□□ -1.66
SMNDC1-204ENST00000471297 UBE2E2Q96LR5 201 aa4.67□□□□□ -1.66
SMNDC1-204ENST00000471297 TUBA4BQ9H853 241 aa4.67□□□□□ -1.66
SMNDC1-204ENST00000471297 SMCO4Q9NRQ5 59 aa4.67□□□□□ -1.66
SMNDC1-204ENST00000471297 PTPN13Q12923 2485 aa4.67□□□□□ -1.66
SMNDC1-204ENST00000471297 NAV2Q8IVL1 2488 aa4.67□□□□□ -1.66
SMNDC1-204ENST00000471297 ANKRD17O75179 2603 aaKnown RBP4.66□□□□□ -1.66
SMNDC1-204ENST00000471297 A0A087X0K7 114 aa4.66□□□□□ -1.66
SMNDC1-204ENST00000471297 A0A1W2PS18 150 aa4.66□□□□□ -1.66
SMNDC1-204ENST00000471297 CLPSL1A2RUU4 121 aa4.66□□□□□ -1.66
SMNDC1-204ENST00000471297 GGTLC3B5MD39 225 aa4.66□□□□□ -1.66
SMNDC1-204ENST00000471297 C9JCJ5 164 aa4.66□□□□□ -1.66
SMNDC1-204ENST00000471297 PPP5D1E7EU14 171 aa4.66□□□□□ -1.66
SMNDC1-204ENST00000471297 DNASE2O00115 360 aaPredicted RBP4.66□□□□□ -1.66
SMNDC1-204ENST00000471297 MRPS12O15235 138 aaKnown RBP4.66□□□□□ -1.66
SMNDC1-204ENST00000471297 BUB3O43684 328 aa4.66□□□□□ -1.66
SMNDC1-204ENST00000471297 ZNF253O75346 499 aa4.66□□□□□ -1.66
SMNDC1-204ENST00000471297 SCO1O75880 301 aa4.66□□□□□ -1.66
SMNDC1-204ENST00000471297 IGHV3-11P01762 117 aa4.66□□□□□ -1.66
SMNDC1-204ENST00000471297 SLC25A5P05141 298 aaKnown RBP4.66□□□□□ -1.66
SMNDC1-204ENST00000471297 IGLC2P0DOY2 106 aa4.66□□□□□ -1.66
SMNDC1-204ENST00000471297 BMI1P35226 326 aa4.66□□□□□ -1.66
SMNDC1-204ENST00000471297 AKR1C3P42330 323 aa4.66□□□□□ -1.66
SMNDC1-204ENST00000471297 GALR1P47211 349 aa4.66□□□□□ -1.66
SMNDC1-204ENST00000471297 CNN1P51911 297 aaKnown RBP4.66□□□□□ -1.66
SMNDC1-204ENST00000471297 HILS1P60008 231 aa4.66□□□□□ -1.66
SMNDC1-204ENST00000471297 RANP62826 216 aaKnown RBP4.66□□□□□ -1.66
SMNDC1-204ENST00000471297 RPL23P62829 140 aaKnown RBP4.66□□□□□ -1.66
SMNDC1-204ENST00000471297 TMEM95Q3KNT9 176 aa4.66□□□□□ -1.66
SMNDC1-204ENST00000471297 LEMD1Q68G75 181 aa4.66□□□□□ -1.66
SMNDC1-204ENST00000471297 Q6ZSV7 163 aa4.66□□□□□ -1.66
SMNDC1-204ENST00000471297 C5orf17Q8NAS9 161 aa4.66□□□□□ -1.66
SMNDC1-204ENST00000471297 GRAMD2BQ96HH9 432 aa4.66□□□□□ -1.66
SMNDC1-204ENST00000471297 DUX5Q96PT3 197 aa4.66□□□□□ -1.66
SMNDC1-204ENST00000471297 ELOVL1Q9BW60 279 aa4.66□□□□□ -1.66
SMNDC1-204ENST00000471297 CTDSP1Q9GZU7 261 aa4.66□□□□□ -1.66
SMNDC1-204ENST00000471297 Q9H3A6 140 aa4.66□□□□□ -1.66
SMNDC1-204ENST00000471297 C16orf95Q9H693 158 aa4.66□□□□□ -1.66
SMNDC1-204ENST00000471297 OTORQ9NRC9 128 aa4.66□□□□□ -1.66
SMNDC1-204ENST00000471297 TMEM242Q9NWH2 141 aa4.66□□□□□ -1.66
SMNDC1-204ENST00000471297 ZNF586Q9NXT0 402 aa4.66□□□□□ -1.66
SMNDC1-204ENST00000471297 CLEC5AQ9NY25 188 aa4.66□□□□□ -1.66
SMNDC1-204ENST00000471297 EPDR1Q9UM22 224 aa4.66□□□□□ -1.66
SMNDC1-204ENST00000471297 FBN2P35556 2912 aa4.66□□□□□ -1.66
SMNDC1-204ENST00000471297 DCHS2Q6V1P9 2916 aa4.66□□□□□ -1.66
SMNDC1-204ENST00000471297 COL12A1Q99715 3063 aa4.65□□□□□ -1.66
SMNDC1-204ENST00000471297 IGHV3-35A0A0C4DH35 117 aa4.65□□□□□ -1.67
SMNDC1-204ENST00000471297 SERTM2A0A1B0GWG4 89 aa4.65□□□□□ -1.67
SMNDC1-204ENST00000471297 CXorf65A6NEN9 183 aa4.65□□□□□ -1.67
SMNDC1-204ENST00000471297 K7EQM0 130 aa4.65□□□□□ -1.67
SMNDC1-204ENST00000471297 LGALS9O00182 355 aa4.65□□□□□ -1.67
SMNDC1-204ENST00000471297 PEX7O00628 323 aa4.65□□□□□ -1.67
SMNDC1-204ENST00000471297 PPP1R2P9O14990 202 aa4.65□□□□□ -1.67
SMNDC1-204ENST00000471297 NUDT3O95989 172 aa4.65□□□□□ -1.67
SMNDC1-204ENST00000471297 MT-ND4LP03901 98 aa4.65□□□□□ -1.67
SMNDC1-204ENST00000471297 LGALS1P09382 135 aaKnown RBP4.65□□□□□ -1.67
SMNDC1-204ENST00000471297 CSN1S1P47710 185 aa4.65□□□□□ -1.67
SMNDC1-204ENST00000471297 CDX1P47902 265 aaPredicted RBP4.65□□□□□ -1.67
SMNDC1-204ENST00000471297 ADIRFQ15847 76 aa4.65□□□□□ -1.67
SMNDC1-204ENST00000471297 TMEM183BQ1AE95 376 aa4.65□□□□□ -1.67
SMNDC1-204ENST00000471297 C16orf54Q6UWD8 224 aa4.65□□□□□ -1.67
SMNDC1-204ENST00000471297 KLHDC1Q8N7A1 406 aa4.65□□□□□ -1.67
SMNDC1-204ENST00000471297 SVIPQ8NHG7 77 aa4.65□□□□□ -1.67
SMNDC1-204ENST00000471297 CMTM2Q8TAZ6 248 aa4.65□□□□□ -1.67
SMNDC1-204ENST00000471297 C2CD4CQ8TF44 421 aa4.65□□□□□ -1.67
SMNDC1-204ENST00000471297 SMIM12Q96EX1 92 aa4.65□□□□□ -1.67
SMNDC1-204ENST00000471297 SMR3AQ99954 134 aa4.65□□□□□ -1.67
SMNDC1-204ENST00000471297 C20orf24Q9BUV8 137 aa4.65□□□□□ -1.67
SMNDC1-204ENST00000471297 AAMDCQ9H7C9 122 aa4.65□□□□□ -1.67
SMNDC1-204ENST00000471297 ESM1Q9NQ30 184 aa4.65□□□□□ -1.67
SMNDC1-204ENST00000471297 UFC1Q9Y3C8 167 aa4.65□□□□□ -1.67
SMNDC1-204ENST00000471297 NAV3Q8IVL0 2385 aa4.64□□□□□ -1.67
SMNDC1-204ENST00000471297 ABCA1O95477 2261 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms