RNA–Protein interactions for RNA: ENST00000470258.5

NHLRC3-203, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,298 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-203ENST00000470258 TCTEX1D4Q5JR98 221 aa7.59□□□□□ -1.19
NHLRC3-203ENST00000470258 ZC2HC1BQ5TFG8 222 aa7.59□□□□□ -1.19
NHLRC3-203ENST00000470258 CEND1Q8N111 149 aa7.59□□□□□ -1.19
NHLRC3-203ENST00000470258 CFAP47Q6ZTR5 3102 aa7.59□□□□□ -1.19
NHLRC3-203ENST00000470258 MRPL51Q4U2R6 128 aaKnown RBP7.59□□□□□ -1.19
NHLRC3-203ENST00000470258 FAM216BQ8N7L0 139 aa7.59□□□□□ -1.19
NHLRC3-203ENST00000470258 TMEM105Q8N8V8 129 aa7.59□□□□□ -1.19
NHLRC3-203ENST00000470258 MRPS17Q9Y2R5 130 aaKnown RBP7.59□□□□□ -1.19
NHLRC3-203ENST00000470258 ASPMQ8IZT6 3477 aa7.59□□□□□ -1.19
NHLRC3-203ENST00000470258 CUL9Q8IWT3 2517 aa7.58□□□□□ -1.2
NHLRC3-203ENST00000470258 WDFY4Q6ZS81 3184 aa7.58□□□□□ -1.2
NHLRC3-203ENST00000470258 E9PLD3 99 aa7.58□□□□□ -1.2
NHLRC3-203ENST00000470258 TWIST1Q15672 202 aa7.58□□□□□ -1.2
NHLRC3-203ENST00000470258 FER1L6-AS2Q96M78 137 aa7.58□□□□□ -1.2
NHLRC3-203ENST00000470258 C17orf77Q96MU5 243 aa7.58□□□□□ -1.2
NHLRC3-203ENST00000470258 RAB9BQ9NP90 201 aa7.58□□□□□ -1.2
NHLRC3-203ENST00000470258 HIGD1AQ9Y241 93 aa7.58□□□□□ -1.2
NHLRC3-203ENST00000470258 IGHV3-72A0A0B4J1Y9 119 aa7.58□□□□□ -1.2
NHLRC3-203ENST00000470258 M0R3E3 92 aa7.58□□□□□ -1.2
NHLRC3-203ENST00000470258 MT-ATP8P03928 68 aa7.58□□□□□ -1.2
NHLRC3-203ENST00000470258 EVI2AP22794 236 aa7.58□□□□□ -1.2
NHLRC3-203ENST00000470258 LEPP41159 167 aa7.58□□□□□ -1.2
NHLRC3-203ENST00000470258 TMEM178AQ8NBL3 297 aa7.58□□□□□ -1.2
NHLRC3-203ENST00000470258 PHLDA1Q8WV24 401 aaPredicted RBP7.58□□□□□ -1.2
NHLRC3-203ENST00000470258 TPSG1Q9NRR2 321 aa7.58□□□□□ -1.2
NHLRC3-203ENST00000470258 C16orf97H3BN30 126 aa7.58□□□□□ -1.2
NHLRC3-203ENST00000470258 PRRG2O14669 202 aa7.58□□□□□ -1.2
NHLRC3-203ENST00000470258 FAM104BQ5XKR9 115 aa7.58□□□□□ -1.2
NHLRC3-203ENST00000470258 C8orf86Q6ZUL3 223 aa7.58□□□□□ -1.2
NHLRC3-203ENST00000470258 ZCCHC24Q8N2G6 241 aaKnown RBP7.58□□□□□ -1.2
NHLRC3-203ENST00000470258 ZNF418Q8TF45 676 aaPredicted RBP7.58□□□□□ -1.2
NHLRC3-203ENST00000470258 GLMPQ8WWB7 406 aa7.58□□□□□ -1.2
NHLRC3-203ENST00000470258 C8orf49Q96NF6 230 aa7.58□□□□□ -1.2
NHLRC3-203ENST00000470258 SRSF8Q9BRL6 282 aaKnown RBP7.58□□□□□ -1.2
NHLRC3-203ENST00000470258 OTORQ9NRC9 128 aa7.58□□□□□ -1.2
NHLRC3-203ENST00000470258 RPUSD1Q9UJJ7 312 aaKnown RBP7.58□□□□□ -1.2
NHLRC3-203ENST00000470258 SIT1Q9Y3P8 196 aa7.58□□□□□ -1.2
NHLRC3-203ENST00000470258 IGLV2-11P01706 119 aa7.57□□□□□ -1.2
NHLRC3-203ENST00000470258 IGKCP01834 107 aa7.57□□□□□ -1.2
NHLRC3-203ENST00000470258 RBP4P02753 201 aa7.57□□□□□ -1.2
NHLRC3-203ENST00000470258 DIAPH2-AS1Q14236 149 aa7.57□□□□□ -1.2
NHLRC3-203ENST00000470258 C12orf74Q32Q52 190 aa7.57□□□□□ -1.2
NHLRC3-203ENST00000470258 C6orf15Q6UXA7 325 aaPredicted RBP7.57□□□□□ -1.2
NHLRC3-203ENST00000470258 RNF183Q96D59 192 aa7.57□□□□□ -1.2
NHLRC3-203ENST00000470258 SPRR3Q9UBC9 169 aa7.57□□□□□ -1.2
NHLRC3-203ENST00000470258 PSG8Q9UQ74 426 aa7.57□□□□□ -1.2
NHLRC3-203ENST00000470258 PKDREJQ9NTG1 2253 aa7.57□□□□□ -1.2
NHLRC3-203ENST00000470258 TRGV5A0A0B4J1U4 118 aa7.57□□□□□ -1.2
NHLRC3-203ENST00000470258 A0A1W2PPI3 338 aa7.57□□□□□ -1.2
NHLRC3-203ENST00000470258 NPIPB5A8MRT5 1133 aa7.57□□□□□ -1.2
NHLRC3-203ENST00000470258 THAP8Q8NA92 274 aa7.57□□□□□ -1.2
NHLRC3-203ENST00000470258 OSR1Q8TAX0 266 aaPredicted RBP7.57□□□□□ -1.2
NHLRC3-203ENST00000470258 ZNF785A8K8V0 405 aa7.56□□□□□ -1.2
NHLRC3-203ENST00000470258 OR10X1Q8NGY0 326 aa7.56□□□□□ -1.2
NHLRC3-203ENST00000470258 LOC107984156A0A0G2JMH3 177 aa7.56□□□□□ -1.2
NHLRC3-203ENST00000470258 TMEM8BA6NDV4 472 aa7.56□□□□□ -1.2
NHLRC3-203ENST00000470258 CGB1A6NKQ9 187 aa7.56□□□□□ -1.2
NHLRC3-203ENST00000470258 PATE3B3GLJ2 98 aa7.56□□□□□ -1.2
NHLRC3-203ENST00000470258 CGB3P0DN86 165 aa7.56□□□□□ -1.2
NHLRC3-203ENST00000470258 CGB7P0DN87 165 aa7.56□□□□□ -1.2
NHLRC3-203ENST00000470258 CRIP1P50238 77 aa7.56□□□□□ -1.2
NHLRC3-203ENST00000470258 MZT1Q08AG7 82 aa7.56□□□□□ -1.2
NHLRC3-203ENST00000470258 MBNL2Q5VZF2 373 aaKnown RBP7.56□□□□□ -1.2
NHLRC3-203ENST00000470258 ZNF562Q6V9R5 426 aa7.56□□□□□ -1.2
NHLRC3-203ENST00000470258 ARL17AQ8IVW1 177 aa7.56□□□□□ -1.2
NHLRC3-203ENST00000470258 TTC9CQ8N5M4 171 aa7.56□□□□□ -1.2
NHLRC3-203ENST00000470258 RALYQ9UKM9 306 aaKnown RBP7.56□□□□□ -1.2
NHLRC3-203ENST00000470258 CYSLTR1Q9Y271 337 aa7.56□□□□□ -1.2
NHLRC3-203ENST00000470258 DSCAML1Q8TD84 2053 aa7.56□□□□□ -1.2
NHLRC3-203ENST00000470258 TRAV40A0A0B4J280 105 aa7.56□□□□□ -1.2
NHLRC3-203ENST00000470258 A0A1B0GW15 77 aa7.56□□□□□ -1.2
NHLRC3-203ENST00000470258 WI2-2373I1.2A0A1W2PRP0 233 aa7.56□□□□□ -1.2
NHLRC3-203ENST00000470258 CCL3L1P16619 93 aa7.56□□□□□ -1.2
NHLRC3-203ENST00000470258 ODF1Q14990 250 aa7.56□□□□□ -1.2
NHLRC3-203ENST00000470258 ZGRF1Q86YA3 2104 aa7.56□□□□□ -1.2
NHLRC3-203ENST00000470258 C8orf46Q8TAG6 207 aa7.56□□□□□ -1.2
NHLRC3-203ENST00000470258 WNK2Q9Y3S1 2297 aa7.56□□□□□ -1.2
NHLRC3-203ENST00000470258 OVOL3O00110 214 aa7.55□□□□□ -1.2
NHLRC3-203ENST00000470258 MAPKAPK5-AS1Q8N8E1 139 aa7.55□□□□□ -1.2
NHLRC3-203ENST00000470258 GAS8-AS1O95177 125 aa7.55□□□□□ -1.2
NHLRC3-203ENST00000470258 TGFAP01135 160 aa7.55□□□□□ -1.2
NHLRC3-203ENST00000470258 CXCL12P48061 93 aa7.55□□□□□ -1.2
NHLRC3-203ENST00000470258 MSMPQ1L6U9 139 aa7.55□□□□□ -1.2
NHLRC3-203ENST00000470258 KLF17Q5JT82 389 aaPredicted RBP7.55□□□□□ -1.2
NHLRC3-203ENST00000470258 PTH2Q96A98 100 aa7.55□□□□□ -1.2
NHLRC3-203ENST00000470258 ANAPC13Q9BS18 74 aa7.55□□□□□ -1.2
NHLRC3-203ENST00000470258 SLC25A39Q9BZJ4 359 aaPredicted RBP7.55□□□□□ -1.2
NHLRC3-203ENST00000470258 MAP1LC3AQ9H492 121 aa7.55□□□□□ -1.2
NHLRC3-203ENST00000470258 HIGD1BQ9P298 99 aa7.55□□□□□ -1.2
NHLRC3-203ENST00000470258 HHLA3Q9XRX5 114 aa7.55□□□□□ -1.2
NHLRC3-203ENST00000470258 KLRC4-KLRK1H3BQV0 150 aa7.54□□□□□ -1.2
NHLRC3-203ENST00000470258 DPM2O94777 84 aa7.54□□□□□ -1.2
NHLRC3-203ENST00000470258 NDUFA3O95167 84 aa7.54□□□□□ -1.2
NHLRC3-203ENST00000470258 OR4C13Q8NGP0 309 aa7.54□□□□□ -1.2
NHLRC3-203ENST00000470258 ZNF502Q8TBZ5 544 aa7.54□□□□□ -1.2
NHLRC3-203ENST00000470258 TM2D2Q9BX73 214 aa7.54□□□□□ -1.2
NHLRC3-203ENST00000470258 TMEM133Q9H2Q1 129 aa7.54□□□□□ -1.2
NHLRC3-203ENST00000470258 IGKV3-15P01624 115 aa7.54□□□□□ -1.2
NHLRC3-203ENST00000470258 FOXI1Q12951 378 aa7.54□□□□□ -1.2
NHLRC3-203ENST00000470258 RRN3P1Q2M238 152 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms