RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 CTSDP07339 412 aaPredicted RBP1.51□□□□□ -2.17
CDC42BPA-211ENST00000466538 TSPAN19P0C672 248 aa1.51□□□□□ -2.17
CDC42BPA-211ENST00000466538 COX4I1P13073 169 aa1.51□□□□□ -2.17
CDC42BPA-211ENST00000466538 EIF5AP63241 154 aaKnown RBP1.51□□□□□ -2.17
CDC42BPA-211ENST00000466538 BCL2L15Q5TBC7 163 aa1.51□□□□□ -2.17
CDC42BPA-211ENST00000466538 RPL13AP3Q6NVV1 102 aa1.51□□□□□ -2.17
CDC42BPA-211ENST00000466538 SOSTDC1Q6X4U4 206 aa1.51□□□□□ -2.17
CDC42BPA-211ENST00000466538 Q6ZQT0 140 aa1.51□□□□□ -2.17
CDC42BPA-211ENST00000466538 Q8IYB0 196 aa1.51□□□□□ -2.17
CDC42BPA-211ENST00000466538 OR8I2Q8N0Y5 310 aa1.51□□□□□ -2.17
CDC42BPA-211ENST00000466538 NAT14Q8WUY8 206 aa1.51□□□□□ -2.17
CDC42BPA-211ENST00000466538 DNAJC9Q8WXX5 260 aa1.51□□□□□ -2.17
CDC42BPA-211ENST00000466538 C2orf88Q9BSF0 95 aa1.51□□□□□ -2.17
CDC42BPA-211ENST00000466538 PAIP2BQ9ULR5 123 aaKnown RBP1.51□□□□□ -2.17
CDC42BPA-211ENST00000466538 MUC6Q6W4X9 2439 aa1.51□□□□□ -2.17
CDC42BPA-211ENST00000466538 WDR97A6NE52 1622 aa1.51□□□□□ -2.17
CDC42BPA-211ENST00000466538 SYNJ1O43426 1573 aa1.51□□□□□ -2.17
CDC42BPA-211ENST00000466538 PTPRGP23470 1445 aa1.5□□□□□ -2.17
CDC42BPA-211ENST00000466538 HMCN1Q96RW7 5635 aa1.5□□□□□ -2.17
CDC42BPA-211ENST00000466538 RTL9Q8NET4 1388 aa1.5□□□□□ -2.17
CDC42BPA-211ENST00000466538 RTTNQ86VV8 2226 aa1.5□□□□□ -2.17
CDC42BPA-211ENST00000466538 CCDC171Q6TFL3 1326 aa1.5□□□□□ -2.17
CDC42BPA-211ENST00000466538 B4DSR2 109 aa1.5□□□□□ -2.17
CDC42BPA-211ENST00000466538 DLEU1O43261 78 aa1.5□□□□□ -2.17
CDC42BPA-211ENST00000466538 MRPS14O60783 128 aaKnown RBP1.5□□□□□ -2.17
CDC42BPA-211ENST00000466538 LYZL6O75951 148 aa1.5□□□□□ -2.17
CDC42BPA-211ENST00000466538 MT-ND4LP03901 98 aa1.5□□□□□ -2.17
CDC42BPA-211ENST00000466538 CRYGAP11844 174 aa1.5□□□□□ -2.17
CDC42BPA-211ENST00000466538 COX6A1P12074 109 aa1.5□□□□□ -2.17
CDC42BPA-211ENST00000466538 HLA-EP13747 358 aa1.5□□□□□ -2.17
CDC42BPA-211ENST00000466538 EVI2AP22794 236 aa1.5□□□□□ -2.17
CDC42BPA-211ENST00000466538 SRP14P37108 136 aaKnown RBP1.5□□□□□ -2.17
CDC42BPA-211ENST00000466538 TMBIM6P55061 237 aa1.5□□□□□ -2.17
CDC42BPA-211ENST00000466538 DYNLT1P63172 113 aa1.5□□□□□ -2.17
CDC42BPA-211ENST00000466538 HBBP68871 147 aa1.5□□□□□ -2.17
CDC42BPA-211ENST00000466538 TCTE3Q8IZS6 198 aa1.5□□□□□ -2.17
CDC42BPA-211ENST00000466538 PPTC7Q8NI37 304 aa1.5□□□□□ -2.17
CDC42BPA-211ENST00000466538 AQP3Q92482 292 aa1.5□□□□□ -2.17
CDC42BPA-211ENST00000466538 DIRC1Q969H9 104 aa1.5□□□□□ -2.17
CDC42BPA-211ENST00000466538 YPEL2Q96QA6 119 aa1.5□□□□□ -2.17
CDC42BPA-211ENST00000466538 GINS4Q9BRT9 223 aa1.5□□□□□ -2.17
CDC42BPA-211ENST00000466538 PRADC1Q9BSG0 188 aa1.5□□□□□ -2.17
CDC42BPA-211ENST00000466538 CACYBPQ9HB71 228 aaKnown RBP1.5□□□□□ -2.17
CDC42BPA-211ENST00000466538 NIT2Q9NQR4 276 aa1.5□□□□□ -2.17
CDC42BPA-211ENST00000466538 MED9Q9NWA0 146 aa1.5□□□□□ -2.17
CDC42BPA-211ENST00000466538 OR5AC2Q9NZP5 309 aa1.5□□□□□ -2.17
CDC42BPA-211ENST00000466538 ERG28Q9UKR5 140 aa1.5□□□□□ -2.17
CDC42BPA-211ENST00000466538 KDM5CP41229 1560 aa1.5□□□□□ -2.17
CDC42BPA-211ENST00000466538 ATG2AQ2TAZ0 1938 aa1.5□□□□□ -2.17
CDC42BPA-211ENST00000466538 ZNF518AQ6AHZ1 1483 aa1.5□□□□□ -2.17
CDC42BPA-211ENST00000466538 ARHGAP31Q2M1Z3 1444 aa1.49□□□□□ -2.17
CDC42BPA-211ENST00000466538 DSPPQ9NZW4 1301 aa1.49□□□□□ -2.17
CDC42BPA-211ENST00000466538 A0A0D9SG52 128 aa1.49□□□□□ -2.17
CDC42BPA-211ENST00000466538 CCDC160A6NGH7 325 aa1.49□□□□□ -2.17
CDC42BPA-211ENST00000466538 ZNF727A8MUV8 499 aa1.49□□□□□ -2.17
CDC42BPA-211ENST00000466538 NDUFB3O43676 98 aa1.49□□□□□ -2.17
CDC42BPA-211ENST00000466538 SULT1C4O75897 302 aa1.49□□□□□ -2.17
CDC42BPA-211ENST00000466538 CST7O76096 145 aa1.49□□□□□ -2.17
CDC42BPA-211ENST00000466538 DPM2O94777 84 aa1.49□□□□□ -2.17
CDC42BPA-211ENST00000466538 TCL1BO95988 128 aa1.49□□□□□ -2.17
CDC42BPA-211ENST00000466538 IGF2P01344 180 aa1.49□□□□□ -2.17
CDC42BPA-211ENST00000466538 IGLV1-51P01701 117 aa1.49□□□□□ -2.17
CDC42BPA-211ENST00000466538 SDC2P34741 201 aa1.49□□□□□ -2.17
CDC42BPA-211ENST00000466538 RPL22P35268 128 aaKnown RBP1.49□□□□□ -2.17
CDC42BPA-211ENST00000466538 LCN15Q6UWW0 184 aa1.49□□□□□ -2.17
CDC42BPA-211ENST00000466538 DPPA3Q6W0C5 159 aa1.49□□□□□ -2.17
CDC42BPA-211ENST00000466538 ZNF826PQ6ZT77 177 aa1.49□□□□□ -2.17
CDC42BPA-211ENST00000466538 SLC30A7Q8NEW0 376 aa1.49□□□□□ -2.17
CDC42BPA-211ENST00000466538 WFDC11Q8NEX6 87 aa1.49□□□□□ -2.17
CDC42BPA-211ENST00000466538 ZNF418Q8TF45 676 aaPredicted RBP1.49□□□□□ -2.17
CDC42BPA-211ENST00000466538 ADAT1Q9BUB4 502 aaKnown RBP1.49□□□□□ -2.17
CDC42BPA-211ENST00000466538 HS3ST2Q9Y278 367 aa1.49□□□□□ -2.17
CDC42BPA-211ENST00000466538 PLXNA4Q9HCM2 1894 aa1.49□□□□□ -2.17
CDC42BPA-211ENST00000466538 BRWD1Q9NSI6 2320 aa1.49□□□□□ -2.17
CDC42BPA-211ENST00000466538 TRGV10A0A0A0MS01 117 aa1.48□□□□□ -2.17
CDC42BPA-211ENST00000466538 TRBV27A0A0K0K1C4 114 aa1.48□□□□□ -2.17
CDC42BPA-211ENST00000466538 MIF4GDA9UHW6 222 aaKnown RBP1.48□□□□□ -2.17
CDC42BPA-211ENST00000466538 HIST1H2BKO60814 126 aa1.48□□□□□ -2.17
CDC42BPA-211ENST00000466538 HIST1H2BJP06899 126 aa1.48□□□□□ -2.17
CDC42BPA-211ENST00000466538 IGLC6P0CF74 106 aa1.48□□□□□ -2.17
CDC42BPA-211ENST00000466538 LINC00694P0DN24 101 aa1.48□□□□□ -2.17
CDC42BPA-211ENST00000466538 CMPK1P30085 196 aa1.48□□□□□ -2.17
CDC42BPA-211ENST00000466538 RPL35P42766 123 aaKnown RBP1.48□□□□□ -2.17
CDC42BPA-211ENST00000466538 DIAPH2-AS1Q14236 149 aa1.48□□□□□ -2.17
CDC42BPA-211ENST00000466538 TMEM244Q5VVB8 128 aa1.48□□□□□ -2.17
CDC42BPA-211ENST00000466538 UNQ6190/PRO20217Q6UXQ8 127 aa1.48□□□□□ -2.17
CDC42BPA-211ENST00000466538 LINC00305Q7Z4B0 112 aa1.48□□□□□ -2.17
CDC42BPA-211ENST00000466538 TEX29Q8N6K0 151 aa1.48□□□□□ -2.17
CDC42BPA-211ENST00000466538 OR51A4Q8NGJ6 313 aa1.48□□□□□ -2.17
CDC42BPA-211ENST00000466538 CCL4L1Q8NHW4 92 aa1.48□□□□□ -2.17
CDC42BPA-211ENST00000466538 C1orf54Q8WWF1 131 aa1.48□□□□□ -2.17
CDC42BPA-211ENST00000466538 VPS25Q9BRG1 176 aa1.48□□□□□ -2.17
CDC42BPA-211ENST00000466538 LXNQ9BS40 222 aa1.48□□□□□ -2.17
CDC42BPA-211ENST00000466538 NPCDR1Q9BY65 106 aa1.48□□□□□ -2.17
CDC42BPA-211ENST00000466538 TANC2Q9HCD6 1990 aa1.48□□□□□ -2.17
CDC42BPA-211ENST00000466538 MYH7P12883 1935 aa1.48□□□□□ -2.17
CDC42BPA-211ENST00000466538 MYH6P13533 1939 aa1.48□□□□□ -2.17
CDC42BPA-211ENST00000466538 USP54Q70EL1 1684 aa1.48□□□□□ -2.17
CDC42BPA-211ENST00000466538 ZFC3H1O60293 1989 aaKnown RBP1.47□□□□□ -2.17
CDC42BPA-211ENST00000466538 DLC1Q96QB1 1528 aa1.47□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms