RNA–Protein interactions for RNA: ENST00000465425.1

SYNE4-204, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 2,339 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-204ENST00000465425 FBLN7Q53RD9 439 aa14.41□□□□□ -0.1
SYNE4-204ENST00000465425 COL5A1-AS1Q5SY13 56 aa14.41□□□□□ -0.1
SYNE4-204ENST00000465425 C11orf71Q6IPW1 123 aa14.41□□□□□ -0.1
SYNE4-204ENST00000465425 C16orf54Q6UWD8 224 aa14.41□□□□□ -0.1
SYNE4-204ENST00000465425 ASCL2Q99929 193 aa14.41□□□□□ -0.1
SYNE4-204ENST00000465425 TRAV9-2A0A087WT02 112 aa14.4□□□□□ -0.1
SYNE4-204ENST00000465425 SH2D7A6NKC9 451 aaPredicted RBP14.4□□□□□ -0.1
SYNE4-204ENST00000465425 M0R3E3 92 aa14.4□□□□□ -0.1
SYNE4-204ENST00000465425 MRPS12O15235 138 aaKnown RBP14.4□□□□□ -0.1
SYNE4-204ENST00000465425 APOHP02749 345 aaPredicted RBP14.4□□□□□ -0.1
SYNE4-204ENST00000465425 CT45A10P0DMU9 189 aa14.4□□□□□ -0.1
SYNE4-204ENST00000465425 VMO1Q7Z5L0 202 aa14.4□□□□□ -0.1
SYNE4-204ENST00000465425 RAXQ9Y2V3 346 aa14.4□□□□□ -0.1
SYNE4-204ENST00000465425 IGHV1-24A0A0C4DH33 117 aa14.4□□□□□ -0.11
SYNE4-204ENST00000465425 CSN1S1P47710 185 aa14.4□□□□□ -0.11
SYNE4-204ENST00000465425 RIGQ13278 110 aa14.4□□□□□ -0.11
SYNE4-204ENST00000465425 KIR3DL3Q8N743 410 aa14.4□□□□□ -0.11
SYNE4-204ENST00000465425 ZNF48Q96MX3 618 aaPredicted RBP14.4□□□□□ -0.11
SYNE4-204ENST00000465425 LPAR2Q9HBW0 351 aa14.4□□□□□ -0.11
SYNE4-204ENST00000465425 C21orf62Q9NYP8 219 aa14.4□□□□□ -0.11
SYNE4-204ENST00000465425 C20orf202A1L168 122 aa14.39□□□□□ -0.11
SYNE4-204ENST00000465425 LEPROTL1O95214 131 aa14.39□□□□□ -0.11
SYNE4-204ENST00000465425 TTC9CQ8N5M4 171 aa14.39□□□□□ -0.11
SYNE4-204ENST00000465425 SCGB2A1O75556 95 aa14.38□□□□□ -0.11
SYNE4-204ENST00000465425 ARMS2P0C7Q2 107 aa14.38□□□□□ -0.11
SYNE4-204ENST00000465425 NDPQ00604 133 aa14.38□□□□□ -0.11
SYNE4-204ENST00000465425 TPPP3Q9BW30 176 aa14.38□□□□□ -0.11
SYNE4-204ENST00000465425 ZNF785A8K8V0 405 aa14.38□□□□□ -0.11
SYNE4-204ENST00000465425 C1orf122Q6ZSJ8 110 aa14.38□□□□□ -0.11
SYNE4-204ENST00000465425 BCL6BQ8N143 479 aaPredicted RBP14.38□□□□□ -0.11
SYNE4-204ENST00000465425 LAMTOR2Q9Y2Q5 125 aa14.38□□□□□ -0.11
SYNE4-204ENST00000465425 NBASA2RRP1 2371 aa14.38□□□□□ -0.11
SYNE4-204ENST00000465425 FAM120AOSQ5T036 256 aa14.37□□□□□ -0.11
SYNE4-204ENST00000465425 Q6AWC8 147 aa14.37□□□□□ -0.11
SYNE4-204ENST00000465425 TMEM208Q9BTX3 173 aa14.37□□□□□ -0.11
SYNE4-204ENST00000465425 OOSP1A8MZH6 123 aa14.37□□□□□ -0.11
SYNE4-204ENST00000465425 IGHV3-23P01764 117 aa14.37□□□□□ -0.11
SYNE4-204ENST00000465425 TMEM11P17152 192 aa14.37□□□□□ -0.11
SYNE4-204ENST00000465425 ZNF124Q15973 351 aa14.37□□□□□ -0.11
SYNE4-204ENST00000465425 DYNAPQ8N1N2 210 aa14.37□□□□□ -0.11
SYNE4-204ENST00000465425 A0A1B0GW15 77 aa14.36□□□□□ -0.11
SYNE4-204ENST00000465425 PSG9Q00887 426 aa14.36□□□□□ -0.11
SYNE4-204ENST00000465425 MINOS1Q5TGZ0 78 aa14.36□□□□□ -0.11
SYNE4-204ENST00000465425 MINOS1-NBL1R4GNA1 71 aa14.36□□□□□ -0.11
SYNE4-204ENST00000465425 SERTM2A0A1B0GWG4 89 aa14.36□□□□□ -0.11
SYNE4-204ENST00000465425 OR2T8A6NH00 312 aa14.36□□□□□ -0.11
SYNE4-204ENST00000465425 OR4C46A6NHA9 309 aa14.36□□□□□ -0.11
SYNE4-204ENST00000465425 F8W735 103 aaPredicted RBP14.36□□□□□ -0.11
SYNE4-204ENST00000465425 CRXO43186 299 aaPredicted RBP14.36□□□□□ -0.11
SYNE4-204ENST00000465425 RPL7P18124 248 aaKnown RBP14.36□□□□□ -0.11
SYNE4-204ENST00000465425 TSPOP30536 169 aa14.36□□□□□ -0.11
SYNE4-204ENST00000465425 CRIP1P50238 77 aa14.36□□□□□ -0.11
SYNE4-204ENST00000465425 SYS1-DBNDD2H3BUS1 97 aa14.35□□□□□ -0.11
SYNE4-204ENST00000465425 DLEU1O43261 78 aa14.35□□□□□ -0.11
SYNE4-204ENST00000465425 CSN3P07498 182 aa14.35□□□□□ -0.11
SYNE4-204ENST00000465425 OR5AL1P0C617 328 aa14.35□□□□□ -0.11
SYNE4-204ENST00000465425 IGLL1P15814 213 aa14.35□□□□□ -0.11
SYNE4-204ENST00000465425 TFPI2P48307 235 aa14.35□□□□□ -0.11
SYNE4-204ENST00000465425 C8orf49Q96NF6 230 aa14.35□□□□□ -0.11
SYNE4-204ENST00000465425 NDUFB8O95169 186 aa14.35□□□□□ -0.11
SYNE4-204ENST00000465425 ZNF138P52744 262 aa14.35□□□□□ -0.11
SYNE4-204ENST00000465425 SPATA12Q7Z6I5 190 aa14.35□□□□□ -0.11
SYNE4-204ENST00000465425 Q8N6K4 173 aa14.35□□□□□ -0.11
SYNE4-204ENST00000465425 CSMD1Q96PZ7 3565 aa14.34□□□□□ -0.11
SYNE4-204ENST00000465425 DMRTA1Q5VZB9 504 aa14.34□□□□□ -0.11
SYNE4-204ENST00000465425 CYB5R2Q6BCY4 276 aa14.34□□□□□ -0.11
SYNE4-204ENST00000465425 IGF2RP11717 2491 aa14.34□□□□□ -0.11
SYNE4-204ENST00000465425 OVOL3O00110 214 aa14.33□□□□□ -0.11
SYNE4-204ENST00000465425 ZFP36P26651 326 aaKnown RBP14.33□□□□□ -0.11
SYNE4-204ENST00000465425 DTX2Q86UW9 622 aa14.33□□□□□ -0.11
SYNE4-204ENST00000465425 MAP1LC3CQ9BXW4 147 aa14.33□□□□□ -0.11
SYNE4-204ENST00000465425 HRNRQ86YZ3 2850 aaPredicted RBP14.33□□□□□ -0.12
SYNE4-204ENST00000465425 EBI3Q14213 229 aa14.33□□□□□ -0.12
SYNE4-204ENST00000465425 LINC00173Q6ZV60 143 aa14.33□□□□□ -0.12
SYNE4-204ENST00000465425 C1RLQ9NZP8 487 aa14.33□□□□□ -0.12
SYNE4-204ENST00000465425 RABAC1Q9UI14 185 aa14.33□□□□□ -0.12
SYNE4-204ENST00000465425 MRPS16Q9Y3D3 137 aaKnown RBP14.33□□□□□ -0.12
SYNE4-204ENST00000465425 GAGE1Q13065 139 aa14.32□□□□□ -0.12
SYNE4-204ENST00000465425 HSPB8Q9UJY1 196 aa14.32□□□□□ -0.12
SYNE4-204ENST00000465425 TMEM189A5PLL7 270 aa14.32□□□□□ -0.12
SYNE4-204ENST00000465425 FAM106CPP0CH98 169 aa14.32□□□□□ -0.12
SYNE4-204ENST00000465425 TMUB1Q9BVT8 246 aa14.32□□□□□ -0.12
SYNE4-204ENST00000465425 TMEM191AQ9H0A3 160 aa14.32□□□□□ -0.12
SYNE4-204ENST00000465425 AP5S1Q9NUS5 200 aa14.32□□□□□ -0.12
SYNE4-204ENST00000465425 GOLT1BQ9Y3E0 138 aa14.32□□□□□ -0.12
SYNE4-204ENST00000465425 TIMM8BQ9Y5J9 83 aaPredicted RBP14.32□□□□□ -0.12
SYNE4-204ENST00000465425 IGKV2-40A0A087WW87 121 aaPredicted RBP14.31□□□□□ -0.12
SYNE4-204ENST00000465425 IGHV7-81A0A0B4J1V7 117 aa14.31□□□□□ -0.12
SYNE4-204ENST00000465425 IGKV2D-40P01614 121 aaPredicted RBP14.31□□□□□ -0.12
SYNE4-204ENST00000465425 CTSGP08311 255 aa14.31□□□□□ -0.12
SYNE4-204ENST00000465425 SAPCD1Q5SSQ6 148 aa14.31□□□□□ -0.12
SYNE4-204ENST00000465425 STPG4Q8N801 248 aa14.31□□□□□ -0.12
SYNE4-204ENST00000465425 GATD1Q8NB37 220 aa14.31□□□□□ -0.12
SYNE4-204ENST00000465425 TMSB15BA0A087X1C1 80 aa14.31□□□□□ -0.12
SYNE4-204ENST00000465425 S100A7P31151 101 aa14.31□□□□□ -0.12
SYNE4-204ENST00000465425 RELQ04864 619 aaPredicted RBP14.31□□□□□ -0.12
SYNE4-204ENST00000465425 COL25A1Q9BXS0 654 aaPredicted RBP14.31□□□□□ -0.12
SYNE4-204ENST00000465425 HSBP1L1C9JCN9 74 aa14.3□□□□□ -0.12
SYNE4-204ENST00000465425 H0Y8G0 127 aa14.3□□□□□ -0.12
SYNE4-204ENST00000465425 SH2D1AO60880 128 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms