RNA–Protein interactions for RNA: ENST00000458085.6

CAPN13-203, Transcript of calpain 13, humanhuman

TSL 5

Gene CAPN13, Length 2,269 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN13-203ENST00000458085 ZNF207O43670 478 aaKnown RBP12.63□□□□□ -0.39
CAPN13-203ENST00000458085 LTAP01374 205 aa12.63□□□□□ -0.39
CAPN13-203ENST00000458085 TCL1AP56279 114 aa12.63□□□□□ -0.39
CAPN13-203ENST00000458085 ACTL10Q5JWF8 245 aa12.63□□□□□ -0.39
CAPN13-203ENST00000458085 FAM223AQ8IWN6 122 aa12.63□□□□□ -0.39
CAPN13-203ENST00000458085 OR8I2Q8N0Y5 310 aa12.63□□□□□ -0.39
CAPN13-203ENST00000458085 MBD6Q96DN6 1003 aa12.63□□□□□ -0.39
CAPN13-203ENST00000458085 FMC1Q96HJ9 113 aa12.63□□□□□ -0.39
CAPN13-203ENST00000458085 SERTAD4Q9NUC0 356 aa12.63□□□□□ -0.39
CAPN13-203ENST00000458085 APOHP02749 345 aaPredicted RBP12.63□□□□□ -0.39
CAPN13-203ENST00000458085 GFI1BQ5VTD9 330 aa12.63□□□□□ -0.39
CAPN13-203ENST00000458085 S100A7AQ86SG5 101 aa12.63□□□□□ -0.39
CAPN13-203ENST00000458085 CIARTQ8N365 385 aaPredicted RBP12.63□□□□□ -0.39
CAPN13-203ENST00000458085 WFDC11Q8NEX6 87 aa12.63□□□□□ -0.39
CAPN13-203ENST00000458085 NUDT10Q8NFP7 164 aa12.63□□□□□ -0.39
CAPN13-203ENST00000458085 NUDT11Q96G61 164 aa12.63□□□□□ -0.39
CAPN13-203ENST00000458085 GAR1Q9NY12 217 aaKnown RBP12.63□□□□□ -0.39
CAPN13-203ENST00000458085 RNF24Q9Y225 148 aa12.63□□□□□ -0.39
CAPN13-203ENST00000458085 IGHV3-49A0A0A0MS15 119 aa12.62□□□□□ -0.39
CAPN13-203ENST00000458085 ZNF705GA8MUZ8 300 aaPredicted RBP12.62□□□□□ -0.39
CAPN13-203ENST00000458085 RPL7P18124 248 aaKnown RBP12.62□□□□□ -0.39
CAPN13-203ENST00000458085 Q86TA4 180 aa12.62□□□□□ -0.39
CAPN13-203ENST00000458085 SPINK4O60575 86 aa12.62□□□□□ -0.39
CAPN13-203ENST00000458085 IGHV3-11P01762 117 aa12.62□□□□□ -0.39
CAPN13-203ENST00000458085 SLC35B1P78383 322 aa12.62□□□□□ -0.39
CAPN13-203ENST00000458085 IGFL4Q6B9Z1 124 aa12.62□□□□□ -0.39
CAPN13-203ENST00000458085 LYPD1Q8N2G4 141 aa12.62□□□□□ -0.39
CAPN13-203ENST00000458085 BUB3O43684 328 aa12.61□□□□□ -0.39
CAPN13-203ENST00000458085 PF4V1P10720 104 aa12.61□□□□□ -0.39
CAPN13-203ENST00000458085 HOXA5P20719 270 aa12.61□□□□□ -0.39
CAPN13-203ENST00000458085 PDE6HQ13956 83 aa12.61□□□□□ -0.39
CAPN13-203ENST00000458085 PRNTQ86SH4 94 aa12.61□□□□□ -0.39
CAPN13-203ENST00000458085 PDZD2O15018 2839 aa12.61□□□□□ -0.39
CAPN13-203ENST00000458085 IFITM10A6NMD0 228 aa12.6□□□□□ -0.39
CAPN13-203ENST00000458085 CFHR3Q02985 330 aa12.6□□□□□ -0.39
CAPN13-203ENST00000458085 PRSS57Q6UWY2 283 aa12.6□□□□□ -0.39
CAPN13-203ENST00000458085 FAM231DQ6ZW35 169 aa12.6□□□□□ -0.39
CAPN13-203ENST00000458085 DIRC3C9JPN6 131 aa12.6□□□□□ -0.39
CAPN13-203ENST00000458085 IGLV1-40P01703 118 aa12.6□□□□□ -0.39
CAPN13-203ENST00000458085 HLA-DMBP28068 263 aa12.6□□□□□ -0.39
CAPN13-203ENST00000458085 SMIM27A0A1W2PRY6 76 aa12.59□□□□□ -0.39
CAPN13-203ENST00000458085 S100A9P06702 114 aaKnown RBP12.59□□□□□ -0.39
CAPN13-203ENST00000458085 CBLN1P23435 193 aa12.59□□□□□ -0.39
CAPN13-203ENST00000458085 ARL3P36405 182 aa12.59□□□□□ -0.39
CAPN13-203ENST00000458085 C10orf99Q6UWK7 81 aa12.59□□□□□ -0.39
CAPN13-203ENST00000458085 BTF3L4Q96K17 158 aa12.59□□□□□ -0.39
CAPN13-203ENST00000458085 TRAPPC1Q9Y5R8 145 aa12.59□□□□□ -0.39
CAPN13-203ENST00000458085 ITPR2Q14571 2701 aa12.59□□□□□ -0.39
CAPN13-203ENST00000458085 ZNF785A8K8V0 405 aa12.59□□□□□ -0.39
CAPN13-203ENST00000458085 GATCO43716 136 aaKnown RBP12.59□□□□□ -0.39
CAPN13-203ENST00000458085 IGHG4P01861 327 aa12.59□□□□□ -0.39
CAPN13-203ENST00000458085 RELQ04864 619 aaPredicted RBP12.59□□□□□ -0.39
CAPN13-203ENST00000458085 CYB5R2Q6BCY4 276 aa12.59□□□□□ -0.39
CAPN13-203ENST00000458085 Q6YL49 198 aa12.59□□□□□ -0.39
CAPN13-203ENST00000458085 C9orf139Q6ZV77 190 aa12.59□□□□□ -0.39
CAPN13-203ENST00000458085 SONP18583 2426 aaKnown RBP12.58□□□□□ -0.4
CAPN13-203ENST00000458085 TRAV9-1A0A075B6T8 112 aa12.58□□□□□ -0.4
CAPN13-203ENST00000458085 H3BUA1 57 aa12.58□□□□□ -0.4
CAPN13-203ENST00000458085 BRI3O95415 125 aa12.58□□□□□ -0.4
CAPN13-203ENST00000458085 PDZD11Q5EBL8 140 aa12.58□□□□□ -0.4
CAPN13-203ENST00000458085 UNQ9165/PRO28630Q6UXU0 137 aa12.58□□□□□ -0.4
CAPN13-203ENST00000458085 LINC00518Q8N0U6 118 aa12.58□□□□□ -0.4
CAPN13-203ENST00000458085 SMIM12Q96EX1 92 aa12.58□□□□□ -0.4
CAPN13-203ENST00000458085 AAMDCQ9H7C9 122 aa12.58□□□□□ -0.4
CAPN13-203ENST00000458085 FLNAP21333 2647 aaKnown RBP12.58□□□□□ -0.4
CAPN13-203ENST00000458085 TMEM183AQ8IXX5 376 aa12.58□□□□□ -0.4
CAPN13-203ENST00000458085 TMEM75Q8N9X5 138 aa12.58□□□□□ -0.4
CAPN13-203ENST00000458085 C19orf71A6NCJ1 209 aa12.57□□□□□ -0.4
CAPN13-203ENST00000458085 RAB9AP51151 201 aa12.57□□□□□ -0.4
CAPN13-203ENST00000458085 PSG3Q16557 428 aa12.57□□□□□ -0.4
CAPN13-203ENST00000458085 IL17RELQ6ZVW7 336 aa12.57□□□□□ -0.4
CAPN13-203ENST00000458085 USMG5Q96IX5 58 aa12.57□□□□□ -0.4
CAPN13-203ENST00000458085 ATP6V0BQ99437 205 aa12.57□□□□□ -0.4
CAPN13-203ENST00000458085 PSG8Q9UQ74 426 aa12.57□□□□□ -0.4
CAPN13-203ENST00000458085 AKAP9Q99996 3911 aa12.57□□□□□ -0.4
CAPN13-203ENST00000458085 IGKV2-40A0A087WW87 121 aaPredicted RBP12.57□□□□□ -0.4
CAPN13-203ENST00000458085 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.57□□□□□ -0.4
CAPN13-203ENST00000458085 ZNF705FA8MVS1 300 aaPredicted RBP12.57□□□□□ -0.4
CAPN13-203ENST00000458085 SMAD7O15105 426 aaKnown RBP12.57□□□□□ -0.4
CAPN13-203ENST00000458085 HOXA3O43365 443 aaPredicted RBP12.57□□□□□ -0.4
CAPN13-203ENST00000458085 IGKV2D-40P01614 121 aaPredicted RBP12.57□□□□□ -0.4
CAPN13-203ENST00000458085 CDX1P47902 265 aaPredicted RBP12.57□□□□□ -0.4
CAPN13-203ENST00000458085 PSG9Q00887 426 aa12.57□□□□□ -0.4
CAPN13-203ENST00000458085 OR4X2Q8NGF9 303 aa12.57□□□□□ -0.4
CAPN13-203ENST00000458085 OR5R1Q8NH85 324 aa12.57□□□□□ -0.4
CAPN13-203ENST00000458085 GRAMD2BQ96HH9 432 aa12.57□□□□□ -0.4
CAPN13-203ENST00000458085 METTL26Q96S19 204 aa12.57□□□□□ -0.4
CAPN13-203ENST00000458085 VPREB3Q9UKI3 123 aa12.57□□□□□ -0.4
CAPN13-203ENST00000458085 U3KQE9 123 aa12.57□□□□□ -0.4
CAPN13-203ENST00000458085 MRPL54Q6P161 138 aaKnown RBP12.56□□□□□ -0.4
CAPN13-203ENST00000458085 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.56□□□□□ -0.4
CAPN13-203ENST00000458085 PRSS22Q9GZN4 317 aa12.56□□□□□ -0.4
CAPN13-203ENST00000458085 ZNF331Q9NQX6 463 aaPredicted RBP12.56□□□□□ -0.4
CAPN13-203ENST00000458085 TRBV6-1A0A0K0K1D8 114 aa12.55□□□□□ -0.4
CAPN13-203ENST00000458085 HIST3H2BBQ8N257 126 aa12.55□□□□□ -0.4
CAPN13-203ENST00000458085 ZC2HC1AQ96GY0 325 aa12.55□□□□□ -0.4
CAPN13-203ENST00000458085 DUX5Q96PT3 197 aa12.55□□□□□ -0.4
CAPN13-203ENST00000458085 GPR61Q9BZJ8 451 aa12.55□□□□□ -0.4
CAPN13-203ENST00000458085 NEU1Q99519 415 aa12.55□□□□□ -0.4
CAPN13-203ENST00000458085 ZNF492Q9P255 531 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms