RNA–Protein interactions for RNA: ENST00000455631.5

PTPRA-208, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 1,107 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-208ENST00000455631 AP3S1Q92572 193 aa15.87■□□□□ 0.13
PTPRA-208ENST00000455631 RPUSD4Q96CM3 377 aaKnown RBP15.87■□□□□ 0.13
PTPRA-208ENST00000455631 VSIG2Q96IQ7 327 aa15.87■□□□□ 0.13
PTPRA-208ENST00000455631 C20orf144Q9BQM9 153 aa15.87■□□□□ 0.13
PTPRA-208ENST00000455631 SHANK2-AS3Q9BTD1 123 aa15.87■□□□□ 0.13
PTPRA-208ENST00000455631 NXPH4O95158 308 aa15.86■□□□□ 0.13
PTPRA-208ENST00000455631 RAP2BP61225 183 aa15.86■□□□□ 0.13
PTPRA-208ENST00000455631 SSBP1Q04837 148 aaKnown RBP15.86■□□□□ 0.13
PTPRA-208ENST00000455631 PRRT1Q99946 306 aa15.86■□□□□ 0.13
PTPRA-208ENST00000455631 FUNDC2Q9BWH2 189 aa15.86■□□□□ 0.13
PTPRA-208ENST00000455631 PARD6GQ9BYG4 376 aaPredicted RBP15.86■□□□□ 0.13
PTPRA-208ENST00000455631 SRRM2Q9UQ35 2752 aaKnown RBP15.85■□□□□ 0.13
PTPRA-208ENST00000455631 ATP6V1G2O95670 118 aa15.85■□□□□ 0.13
PTPRA-208ENST00000455631 NFE4Q86UQ8 179 aa15.85■□□□□ 0.13
PTPRA-208ENST00000455631 OR51S1Q8NGJ8 323 aa15.85■□□□□ 0.13
PTPRA-208ENST00000455631 HIGD1AQ9Y241 93 aa15.85■□□□□ 0.13
PTPRA-208ENST00000455631 A0A087X0K7 114 aa15.84■□□□□ 0.13
PTPRA-208ENST00000455631 PRSS46E5RG02 174 aa15.84■□□□□ 0.13
PTPRA-208ENST00000455631 AKAIN1P0CW23 69 aa15.84■□□□□ 0.13
PTPRA-208ENST00000455631 GCSHP23434 173 aa15.84■□□□□ 0.13
PTPRA-208ENST00000455631 GFI1BQ5VTD9 330 aa15.84■□□□□ 0.13
PTPRA-208ENST00000455631 Q6ZTI0 123 aa15.84■□□□□ 0.13
PTPRA-208ENST00000455631 TMED4Q7Z7H5 227 aa15.84■□□□□ 0.13
PTPRA-208ENST00000455631 SRPXP78539 464 aa15.83■□□□□ 0.12
PTPRA-208ENST00000455631 CCDC190Q86UF4 302 aa15.83■□□□□ 0.12
PTPRA-208ENST00000455631 OR5G3P0C626 314 aa15.82■□□□□ 0.12
PTPRA-208ENST00000455631 ANXA3P12429 323 aa15.82■□□□□ 0.12
PTPRA-208ENST00000455631 RPP30P78346 268 aaKnown RBP15.82■□□□□ 0.12
PTPRA-208ENST00000455631 CLVS1Q8IUQ0 354 aaPredicted RBP15.82■□□□□ 0.12
PTPRA-208ENST00000455631 TRGV2A0A075B6R0 118 aa15.81■□□□□ 0.12
PTPRA-208ENST00000455631 A0A087WXM4 84 aa15.81■□□□□ 0.12
PTPRA-208ENST00000455631 J3KRW8 73 aa15.81■□□□□ 0.12
PTPRA-208ENST00000455631 PITX3O75364 302 aa15.81■□□□□ 0.12
PTPRA-208ENST00000455631 HYPMO75409 117 aa15.81■□□□□ 0.12
PTPRA-208ENST00000455631 IL5P05113 134 aa15.81■□□□□ 0.12
PTPRA-208ENST00000455631 MRPS10P82664 201 aaKnown RBP15.81■□□□□ 0.12
PTPRA-208ENST00000455631 CYP2G1PQ6ZSU1 146 aa15.81■□□□□ 0.12
PTPRA-208ENST00000455631 ACOT7LQ6ZUV0 252 aa15.81■□□□□ 0.12
PTPRA-208ENST00000455631 MED6O75586 246 aa15.8■□□□□ 0.12
PTPRA-208ENST00000455631 SMIM4Q8WVI0 70 aa15.8■□□□□ 0.12
PTPRA-208ENST00000455631 SCGB3A2Q96PL1 93 aa15.8■□□□□ 0.12
PTPRA-208ENST00000455631 CIB3Q96Q77 187 aaPredicted RBP15.8■□□□□ 0.12
PTPRA-208ENST00000455631 SMCO3A2RU48 225 aa15.79■□□□□ 0.12
PTPRA-208ENST00000455631 WRBO00258 174 aa15.79■□□□□ 0.12
PTPRA-208ENST00000455631 LINC00869P0C866 280 aa15.79■□□□□ 0.12
PTPRA-208ENST00000455631 DAZ2Q13117 558 aaKnown RBP15.79■□□□□ 0.12
PTPRA-208ENST00000455631 ICOSQ9Y6W8 199 aa15.79■□□□□ 0.12
PTPRA-208ENST00000455631 SPANXN5Q5MJ07 72 aa15.78■□□□□ 0.12
PTPRA-208ENST00000455631 SCP2D1Q9UJQ7 156 aa15.78■□□□□ 0.12
PTPRA-208ENST00000455631 TRAV12-3A0A0B4J271 114 aa15.77■□□□□ 0.12
PTPRA-208ENST00000455631 PMS2P5A8MQ11 134 aa15.77■□□□□ 0.12
PTPRA-208ENST00000455631 H3BP45 60 aa15.77■□□□□ 0.12
PTPRA-208ENST00000455631 ANXA7P20073 488 aaKnown RBP15.77■□□□□ 0.12
PTPRA-208ENST00000455631 MIXL1Q9H2W2 232 aa15.77■□□□□ 0.12
PTPRA-208ENST00000455631 PIGBOS1A0A0B4J2F0 54 aa15.76■□□□□ 0.11
PTPRA-208ENST00000455631 DUXBA0A1W2PPF3 345 aa15.76■□□□□ 0.11
PTPRA-208ENST00000455631 RGS5O15539 181 aa15.76■□□□□ 0.11
PTPRA-208ENST00000455631 SYNGR2O43760 224 aa15.76■□□□□ 0.11
PTPRA-208ENST00000455631 SNRPCP09234 159 aaKnown RBP15.76■□□□□ 0.11
PTPRA-208ENST00000455631 CXCL2P19875 107 aa15.76■□□□□ 0.11
PTPRA-208ENST00000455631 LCN15Q6UWW0 184 aa15.76■□□□□ 0.11
PTPRA-208ENST00000455631 PYGO2Q9BRQ0 406 aa15.76■□□□□ 0.11
PTPRA-208ENST00000455631 ZNF331Q9NQX6 463 aaPredicted RBP15.76■□□□□ 0.11
PTPRA-208ENST00000455631 MCUBQ9NWR8 336 aa15.76■□□□□ 0.11
PTPRA-208ENST00000455631 TRAV9-2A0A087WT02 112 aa15.75■□□□□ 0.11
PTPRA-208ENST00000455631 TRGV1A0A0A0MS02 117 aa15.75■□□□□ 0.11
PTPRA-208ENST00000455631 PRAC2D3DTV9 90 aa15.75■□□□□ 0.11
PTPRA-208ENST00000455631 PAX4O43316 350 aa15.75■□□□□ 0.11
PTPRA-208ENST00000455631 PLP1P60201 277 aa15.75■□□□□ 0.11
PTPRA-208ENST00000455631 S100A7AQ86SG5 101 aa15.75■□□□□ 0.11
PTPRA-208ENST00000455631 SLC50A1Q9BRV3 221 aa15.75■□□□□ 0.11
PTPRA-208ENST00000455631 GSN-AS1Q9NRJ2 163 aa15.75■□□□□ 0.11
PTPRA-208ENST00000455631 MSRB1Q9NZV6 116 aa15.75■□□□□ 0.11
PTPRA-208ENST00000455631 FUT9Q9Y231 359 aa15.75■□□□□ 0.11
PTPRA-208ENST00000455631 LY96Q9Y6Y9 160 aa15.75■□□□□ 0.11
PTPRA-208ENST00000455631 MRPS12O15235 138 aaKnown RBP15.74■□□□□ 0.11
PTPRA-208ENST00000455631 TMEM70Q9BUB7 260 aa15.74■□□□□ 0.11
PTPRA-208ENST00000455631 ARL6Q9H0F7 186 aa15.74■□□□□ 0.11
PTPRA-208ENST00000455631 STRAPQ9Y3F4 350 aaKnown RBP15.74■□□□□ 0.11
PTPRA-208ENST00000455631 IGLV5-52A0A0A0MRZ9 124 aa15.73■□□□□ 0.11
PTPRA-208ENST00000455631 SLC25A6P12236 298 aa15.73■□□□□ 0.11
PTPRA-208ENST00000455631 LINC00467Q9BRT7 94 aa15.73■□□□□ 0.11
PTPRA-208ENST00000455631 LINC00854A0A1B0GVQ3 168 aa15.72■□□□□ 0.11
PTPRA-208ENST00000455631 ANKRD20A5PA0PJZ0 165 aa15.72■□□□□ 0.11
PTPRA-208ENST00000455631 NPIPB6E9PJ23 425 aa15.72■□□□□ 0.11
PTPRA-208ENST00000455631 ZNF324O75467 553 aaPredicted RBP15.72■□□□□ 0.11
PTPRA-208ENST00000455631 LEPP41159 167 aa15.72■□□□□ 0.11
PTPRA-208ENST00000455631 SELENOTP62341 195 aa15.72■□□□□ 0.11
PTPRA-208ENST00000455631 IL18Q14116 193 aa15.72■□□□□ 0.11
PTPRA-208ENST00000455631 LYPD5Q6UWN5 251 aa15.72■□□□□ 0.11
PTPRA-208ENST00000455631 ZNF680Q8NEM1 530 aa15.72■□□□□ 0.11
PTPRA-208ENST00000455631 NAA50Q9GZZ1 169 aaKnown RBP15.72■□□□□ 0.11
PTPRA-208ENST00000455631 ARV1Q9H2C2 271 aa15.72■□□□□ 0.11
PTPRA-208ENST00000455631 RNF24Q9Y225 148 aa15.72■□□□□ 0.11
PTPRA-208ENST00000455631 H3BTX0 84 aa15.71■□□□□ 0.11
PTPRA-208ENST00000455631 PATE2Q6UY27 113 aa15.71■□□□□ 0.11
PTPRA-208ENST00000455631 C11orf72Q8NBR9 251 aa15.71■□□□□ 0.11
PTPRA-208ENST00000455631 ZNF431Q8TF32 576 aaPredicted RBP15.71■□□□□ 0.11
PTPRA-208ENST00000455631 UBR4Q5T4S7 5183 aa15.7■□□□□ 0.1
PTPRA-208ENST00000455631 SLC17A3O00476 420 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms