RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 SPNP16150 400 aa2.82□□□□□ -1.96
LINC00393-202ENST00000452852 CNTFRP26992 372 aa2.82□□□□□ -1.96
LINC00393-202ENST00000452852 WNT4P56705 351 aa2.82□□□□□ -1.96
LINC00393-202ENST00000452852 RPS11P62280 158 aaKnown RBP eCLIP2.82□□□□□ -1.96
LINC00393-202ENST00000452852 RAB31Q13636 194 aa2.82□□□□□ -1.96
LINC00393-202ENST00000452852 HMGN3Q15651 99 aa2.82□□□□□ -1.96
LINC00393-202ENST00000452852 HSD17B12Q53GQ0 312 aa2.82□□□□□ -1.96
LINC00393-202ENST00000452852 AKIRIN2Q53H80 203 aa2.82□□□□□ -1.96
LINC00393-202ENST00000452852 OR10J3Q5JRS4 329 aa2.82□□□□□ -1.96
LINC00393-202ENST00000452852 UNQ5815/PRO19632Q6UWF5 114 aa2.82□□□□□ -1.96
LINC00393-202ENST00000452852 SGPP2Q8IWX5 399 aa2.82□□□□□ -1.96
LINC00393-202ENST00000452852 C8orf59Q8N0T1 100 aaPredicted RBP2.82□□□□□ -1.96
LINC00393-202ENST00000452852 PACRGLQ8N7B6 248 aa2.82□□□□□ -1.96
LINC00393-202ENST00000452852 OR1S1Q8NH92 325 aa2.82□□□□□ -1.96
LINC00393-202ENST00000452852 COQ8AQ8NI60 647 aa2.82□□□□□ -1.96
LINC00393-202ENST00000452852 MYOZ3Q8TDC0 251 aa2.82□□□□□ -1.96
LINC00393-202ENST00000452852 ISOC1Q96CN7 298 aa2.82□□□□□ -1.96
LINC00393-202ENST00000452852 FAM210BQ96KR6 192 aa2.82□□□□□ -1.96
LINC00393-202ENST00000452852 PGLYRP3Q96LB9 341 aa2.82□□□□□ -1.96
LINC00393-202ENST00000452852 METTL26Q96S19 204 aa2.82□□□□□ -1.96
LINC00393-202ENST00000452852 PHB2Q99623 299 aa2.82□□□□□ -1.96
LINC00393-202ENST00000452852 RNF5Q99942 180 aa2.82□□□□□ -1.96
LINC00393-202ENST00000452852 FAAP24Q9BTP7 215 aa2.82□□□□□ -1.96
LINC00393-202ENST00000452852 TMED9Q9BVK6 235 aa2.82□□□□□ -1.96
LINC00393-202ENST00000452852 MND1Q9BWT6 205 aa2.82□□□□□ -1.96
LINC00393-202ENST00000452852 TOLLIPQ9H0E2 274 aa2.82□□□□□ -1.96
LINC00393-202ENST00000452852 ALX4Q9H161 411 aaPredicted RBP2.82□□□□□ -1.96
LINC00393-202ENST00000452852 FBXL15Q9H469 300 aa2.82□□□□□ -1.96
LINC00393-202ENST00000452852 C12orf4Q9NQ89 552 aa2.82□□□□□ -1.96
LINC00393-202ENST00000452852 SCN3BQ9NY72 215 aa2.82□□□□□ -1.96
LINC00393-202ENST00000452852 CSMD3Q7Z407 3707 aa2.82□□□□□ -1.96
LINC00393-202ENST00000452852 IGLV1-50A0A075B6I6 118 aa2.81□□□□□ -1.96
LINC00393-202ENST00000452852 FABP12A6NFH5 140 aa2.81□□□□□ -1.96
LINC00393-202ENST00000452852 H0Y980 276 aa2.81□□□□□ -1.96
LINC00393-202ENST00000452852 H0YJW9 148 aa2.81□□□□□ -1.96
LINC00393-202ENST00000452852 M0R1X1 148 aa2.81□□□□□ -1.96
LINC00393-202ENST00000452852 ITGB1BP1O14713 200 aa2.81□□□□□ -1.96
LINC00393-202ENST00000452852 PSPHP1O15172 72 aa2.81□□□□□ -1.96
LINC00393-202ENST00000452852 NDUFS5O43920 106 aa2.81□□□□□ -1.96
LINC00393-202ENST00000452852 CA2P00918 260 aa2.81□□□□□ -1.96
LINC00393-202ENST00000452852 IGHV3-11P01762 117 aa2.81□□□□□ -1.96
LINC00393-202ENST00000452852 IFNA6P05013 189 aa2.81□□□□□ -1.96
LINC00393-202ENST00000452852 LGALS7P47929 136 aa2.81□□□□□ -1.96
LINC00393-202ENST00000452852 HLA-DRB3P79483 266 aa2.81□□□□□ -1.96
LINC00393-202ENST00000452852 IFITM3Q01628 133 aa2.81□□□□□ -1.96
LINC00393-202ENST00000452852 FXYD3Q14802 87 aa2.81□□□□□ -1.96
LINC00393-202ENST00000452852 ACSM3Q53FZ2 586 aa2.81□□□□□ -1.96
LINC00393-202ENST00000452852 SMUG1Q53HV7 270 aa2.81□□□□□ -1.96
LINC00393-202ENST00000452852 RPL39P5Q59GN2 51 aa2.81□□□□□ -1.96
LINC00393-202ENST00000452852 OR10K2Q6IF99 312 aa2.81□□□□□ -1.96
LINC00393-202ENST00000452852 CD200R1LQ6Q8B3 271 aa2.81□□□□□ -1.96
LINC00393-202ENST00000452852 C6orf201Q7Z4U5 140 aa2.81□□□□□ -1.96
LINC00393-202ENST00000452852 LYPD6Q86Y78 171 aa2.81□□□□□ -1.96
LINC00393-202ENST00000452852 PDPNQ86YL7 162 aa2.81□□□□□ -1.96
LINC00393-202ENST00000452852 SBSPONQ8IVN8 264 aa2.81□□□□□ -1.96
LINC00393-202ENST00000452852 ZNF738Q8NE65 137 aa2.81□□□□□ -1.96
LINC00393-202ENST00000452852 LFNGQ8NES3 379 aa2.81□□□□□ -1.96
LINC00393-202ENST00000452852 BPIFB6Q8NFQ5 453 aa2.81□□□□□ -1.96
LINC00393-202ENST00000452852 GRPEL2Q8TAA5 225 aa2.81□□□□□ -1.96
LINC00393-202ENST00000452852 CASTOR1Q8WTX7 329 aa2.81□□□□□ -1.96
LINC00393-202ENST00000452852 RBMXL1Q96E39 390 aaKnown RBP2.81□□□□□ -1.96
LINC00393-202ENST00000452852 ABHD14BQ96IU4 210 aa2.81□□□□□ -1.96
LINC00393-202ENST00000452852 CAMK2N2Q96S95 79 aa2.81□□□□□ -1.96
LINC00393-202ENST00000452852 CMSS1Q9BQ75 279 aaKnown RBP2.81□□□□□ -1.96
LINC00393-202ENST00000452852 FAM103A1Q9BTL3 118 aaKnown RBP2.81□□□□□ -1.96
LINC00393-202ENST00000452852 RPP21Q9H633 154 aaKnown RBP2.81□□□□□ -1.96
LINC00393-202ENST00000452852 TUBA4BQ9H853 241 aa2.81□□□□□ -1.96
LINC00393-202ENST00000452852 ZNF331Q9NQX6 463 aaPredicted RBP2.81□□□□□ -1.96
LINC00393-202ENST00000452852 RBM7Q9Y580 266 aaKnown RBP2.81□□□□□ -1.96
LINC00393-202ENST00000452852 NUBP2Q9Y5Y2 271 aa2.81□□□□□ -1.96
LINC00393-202ENST00000452852 PUS1Q9Y606 427 aaKnown RBP eCLIP2.81□□□□□ -1.96
LINC00393-202ENST00000452852 DYNC2H1Q8NCM8 4307 aaKnown RBP2.8□□□□□ -1.96
LINC00393-202ENST00000452852 LYSTQ99698 3801 aa2.8□□□□□ -1.96
LINC00393-202ENST00000452852 SORL1Q92673 2214 aa2.8□□□□□ -1.96
LINC00393-202ENST00000452852 TMEM14DPA8MWL7 114 aa2.8□□□□□ -1.96
LINC00393-202ENST00000452852 H3BUA1 57 aa2.8□□□□□ -1.96
LINC00393-202ENST00000452852 CREBL2O60519 120 aaPredicted RBP2.8□□□□□ -1.96
LINC00393-202ENST00000452852 ARL6IP5O75915 188 aa2.8□□□□□ -1.96
LINC00393-202ENST00000452852 NAPSAO96009 420 aa2.8□□□□□ -1.96
LINC00393-202ENST00000452852 CDK1P06493 297 aa2.8□□□□□ -1.96
LINC00393-202ENST00000452852 GADD45AP24522 165 aa2.8□□□□□ -1.96
LINC00393-202ENST00000452852 PSMA1P25786 263 aaKnown RBP2.8□□□□□ -1.96
LINC00393-202ENST00000452852 SERPINB10P48595 397 aa2.8□□□□□ -1.96
LINC00393-202ENST00000452852 PSMD7P51665 324 aa2.8□□□□□ -1.96
LINC00393-202ENST00000452852 RTL8BQ17RB0 113 aa2.8□□□□□ -1.96
LINC00393-202ENST00000452852 VMA21Q3ZAQ7 101 aa2.8□□□□□ -1.96
LINC00393-202ENST00000452852 CDNFQ49AH0 187 aa2.8□□□□□ -1.96
LINC00393-202ENST00000452852 ZFAND6Q6FIF0 208 aa2.8□□□□□ -1.96
LINC00393-202ENST00000452852 ZNF880Q6PDB4 577 aa2.8□□□□□ -1.96
LINC00393-202ENST00000452852 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.8□□□□□ -1.96
LINC00393-202ENST00000452852 OR5T1Q8NG75 326 aa2.8□□□□□ -1.96
LINC00393-202ENST00000452852 OR10J5Q8NHC4 309 aa2.8□□□□□ -1.96
LINC00393-202ENST00000452852 DYNLRB2Q8TF09 96 aa2.8□□□□□ -1.96
LINC00393-202ENST00000452852 BLNKQ8WV28 456 aa2.8□□□□□ -1.96
LINC00393-202ENST00000452852 TMEM203Q969S6 136 aa2.8□□□□□ -1.96
LINC00393-202ENST00000452852 GINS4Q9BRT9 223 aa2.8□□□□□ -1.96
LINC00393-202ENST00000452852 DCUN1D5Q9BTE7 237 aa2.8□□□□□ -1.96
LINC00393-202ENST00000452852 CCDC90BQ9GZT6 254 aa2.8□□□□□ -1.96
LINC00393-202ENST00000452852 COA4Q9NYJ1 87 aa2.8□□□□□ -1.96
LINC00393-202ENST00000452852 AK3Q9UIJ7 227 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms