RNA–Protein interactions for RNA: ENST00000448223.6

SMC6-207, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,233 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-207ENST00000448223 IGKV1D-12P01611 117 aa7.6□□□□□ -1.19
SMC6-207ENST00000448223 HAMPP81172 84 aa7.6□□□□□ -1.19
SMC6-207ENST00000448223 FAM214BQ7L5A3 538 aa7.6□□□□□ -1.19
SMC6-207ENST00000448223 LEAP2Q969E1 77 aa7.6□□□□□ -1.19
SMC6-207ENST00000448223 ZFHX2Q9C0A1 2572 aaPredicted RBP7.6□□□□□ -1.19
SMC6-207ENST00000448223 TRANK1O15050 2925 aa7.6□□□□□ -1.19
SMC6-207ENST00000448223 IQCF6A8MYZ5 107 aa7.59□□□□□ -1.19
SMC6-207ENST00000448223 FOXG1P55316 489 aaPredicted RBP7.59□□□□□ -1.19
SMC6-207ENST00000448223 ZNF826PQ6ZT77 177 aa7.59□□□□□ -1.19
SMC6-207ENST00000448223 CARD19Q96LW7 228 aa7.59□□□□□ -1.19
SMC6-207ENST00000448223 JPT2Q9H910 190 aa7.59□□□□□ -1.19
SMC6-207ENST00000448223 PRO1854Q9UHT4 67 aa7.59□□□□□ -1.19
SMC6-207ENST00000448223 IGKV1-27A0A075B6S5 117 aa7.59□□□□□ -1.19
SMC6-207ENST00000448223 GTF3C1Q12789 2109 aa7.59□□□□□ -1.19
SMC6-207ENST00000448223 RPL39P5Q59GN2 51 aa7.59□□□□□ -1.19
SMC6-207ENST00000448223 CHCHD2Q9Y6H1 151 aaPredicted RBP7.59□□□□□ -1.19
SMC6-207ENST00000448223 IGHV3-35A0A0C4DH35 117 aa7.59□□□□□ -1.19
SMC6-207ENST00000448223 FAM236AA0A1B0GUQ0 79 aa7.59□□□□□ -1.19
SMC6-207ENST00000448223 FAM236BA0A1B0GV22 79 aa7.59□□□□□ -1.19
SMC6-207ENST00000448223 PTPRSQ13332 1948 aa7.59□□□□□ -1.19
SMC6-207ENST00000448223 TFF1P04155 84 aa7.59□□□□□ -1.19
SMC6-207ENST00000448223 C12orf74Q32Q52 190 aa7.59□□□□□ -1.19
SMC6-207ENST00000448223 OSR1Q8TAX0 266 aaPredicted RBP7.59□□□□□ -1.19
SMC6-207ENST00000448223 IGKV1D-13A0A0B4J2D9 117 aa7.58□□□□□ -1.2
SMC6-207ENST00000448223 LEPROTO15243 131 aa7.58□□□□□ -1.2
SMC6-207ENST00000448223 ACYP1P07311 99 aa7.58□□□□□ -1.2
SMC6-207ENST00000448223 IGLC1P0CG04 106 aa7.58□□□□□ -1.2
SMC6-207ENST00000448223 IGKV1-13P0DP09 117 aa7.58□□□□□ -1.2
SMC6-207ENST00000448223 PAX1P15863 534 aa7.58□□□□□ -1.2
SMC6-207ENST00000448223 HGFACQ04756 655 aa7.58□□□□□ -1.2
SMC6-207ENST00000448223 FOXC1Q12948 553 aa7.58□□□□□ -1.2
SMC6-207ENST00000448223 LYZL1Q6UWQ5 148 aa7.58□□□□□ -1.2
SMC6-207ENST00000448223 DTX1Q86Y01 620 aa7.58□□□□□ -1.2
SMC6-207ENST00000448223 IGHV3OR16-13A0A075B7E8 117 aa7.58□□□□□ -1.2
SMC6-207ENST00000448223 IGHV3-74A0A0B4J1X5 117 aa7.58□□□□□ -1.2
SMC6-207ENST00000448223 MAGEA5P43359 124 aa7.58□□□□□ -1.2
SMC6-207ENST00000448223 SPEM2Q0P670 501 aa7.58□□□□□ -1.2
SMC6-207ENST00000448223 TMEM30BQ3MIR4 351 aa7.58□□□□□ -1.2
SMC6-207ENST00000448223 LHFPL1Q86WI0 220 aa7.58□□□□□ -1.2
SMC6-207ENST00000448223 C1orf147Q96MC9 270 aaPredicted RBP7.58□□□□□ -1.2
SMC6-207ENST00000448223 FOXA2Q9Y261 457 aaPredicted RBP7.58□□□□□ -1.2
SMC6-207ENST00000448223 HS3ST6Q96QI5 342 aa7.58□□□□□ -1.2
SMC6-207ENST00000448223 ARFGEF3Q5TH69 2177 aa7.58□□□□□ -1.2
SMC6-207ENST00000448223 MYMXA0A1B0GTQ4 84 aa7.58□□□□□ -1.2
SMC6-207ENST00000448223 C12orf77C9JDV5 145 aa7.58□□□□□ -1.2
SMC6-207ENST00000448223 AGFG2O95081 481 aa7.58□□□□□ -1.2
SMC6-207ENST00000448223 HLA-DMBP28068 263 aa7.58□□□□□ -1.2
SMC6-207ENST00000448223 LGALS9BQ3B8N2 356 aa7.58□□□□□ -1.2
SMC6-207ENST00000448223 LGALS9CQ6DKI2 356 aa7.58□□□□□ -1.2
SMC6-207ENST00000448223 TMEM171Q8WVE6 324 aa7.58□□□□□ -1.2
SMC6-207ENST00000448223 SIGLEC8Q9NYZ4 499 aa7.58□□□□□ -1.2
SMC6-207ENST00000448223 WDFY4Q6ZS81 3184 aa7.57□□□□□ -1.2
SMC6-207ENST00000448223 NPYP01303 97 aa7.57□□□□□ -1.2
SMC6-207ENST00000448223 TREML4Q6UXN2 200 aa7.57□□□□□ -1.2
SMC6-207ENST00000448223 FRYLO94915 3013 aa7.57□□□□□ -1.2
SMC6-207ENST00000448223 REV3LO60673 3130 aa7.57□□□□□ -1.2
SMC6-207ENST00000448223 RS1O15537 224 aa7.57□□□□□ -1.2
SMC6-207ENST00000448223 SLC25A39Q9BZJ4 359 aaPredicted RBP7.57□□□□□ -1.2
SMC6-207ENST00000448223 U3KQE9 123 aa7.57□□□□□ -1.2
SMC6-207ENST00000448223 INTS1Q8N201 2190 aaKnown RBP7.57□□□□□ -1.2
SMC6-207ENST00000448223 MED13Q9UHV7 2174 aa7.57□□□□□ -1.2
SMC6-207ENST00000448223 A0A1B0GX51 115 aa7.57□□□□□ -1.2
SMC6-207ENST00000448223 IGKV3-20P01619 116 aa7.57□□□□□ -1.2
SMC6-207ENST00000448223 SNRPD3P62318 126 aaKnown RBP7.57□□□□□ -1.2
SMC6-207ENST00000448223 FAM106CPP0CH98 169 aa7.57□□□□□ -1.2
SMC6-207ENST00000448223 FAM106AQ4KMX7 169 aa7.57□□□□□ -1.2
SMC6-207ENST00000448223 TMEM190Q8WZ59 177 aa7.57□□□□□ -1.2
SMC6-207ENST00000448223 CLUHP3Q96NS8 147 aa7.57□□□□□ -1.2
SMC6-207ENST00000448223 PCOLCEQ15113 449 aa7.56□□□□□ -1.2
SMC6-207ENST00000448223 TCRAP04437 139 aa7.56□□□□□ -1.2
SMC6-207ENST00000448223 SLC25A16P16260 332 aa7.56□□□□□ -1.2
SMC6-207ENST00000448223 RNASE4P34096 147 aaKnown RBP7.56□□□□□ -1.2
SMC6-207ENST00000448223 COA6Q5JTJ3 125 aaKnown RBP7.56□□□□□ -1.2
SMC6-207ENST00000448223 SPATA31B1PQ5VZV4 182 aa7.56□□□□□ -1.2
SMC6-207ENST00000448223 NOTCH3Q9UM47 2321 aa7.56□□□□□ -1.2
SMC6-207ENST00000448223 TCRBV4S1A1TA0A5B7 111 aa7.56□□□□□ -1.2
SMC6-207ENST00000448223 ATP5G2Q06055 141 aa7.56□□□□□ -1.2
SMC6-207ENST00000448223 WFDC2Q14508 124 aa7.56□□□□□ -1.2
SMC6-207ENST00000448223 PRDM6Q9NQX0 595 aa7.56□□□□□ -1.2
SMC6-207ENST00000448223 TRAV41A0A0B4J266 112 aa7.56□□□□□ -1.2
SMC6-207ENST00000448223 MALP21145 153 aa7.56□□□□□ -1.2
SMC6-207ENST00000448223 PLA2G5P39877 138 aa7.56□□□□□ -1.2
SMC6-207ENST00000448223 TMEM42Q69YG0 159 aa7.56□□□□□ -1.2
SMC6-207ENST00000448223 FOXI2Q6ZQN5 318 aa7.56□□□□□ -1.2
SMC6-207ENST00000448223 LYPD6Q86Y78 171 aa7.56□□□□□ -1.2
SMC6-207ENST00000448223 SPATA25Q9BR10 227 aa7.56□□□□□ -1.2
SMC6-207ENST00000448223 PLA2G2EQ9NZK7 142 aa7.56□□□□□ -1.2
SMC6-207ENST00000448223 CREBBPQ92793 2442 aa7.56□□□□□ -1.2
SMC6-207ENST00000448223 A0A0U1RQV1 116 aa7.55□□□□□ -1.2
SMC6-207ENST00000448223 YPEL1O60688 119 aa7.55□□□□□ -1.2
SMC6-207ENST00000448223 TEN1Q86WV5 123 aa7.55□□□□□ -1.2
SMC6-207ENST00000448223 YPEL2Q96QA6 119 aa7.55□□□□□ -1.2
SMC6-207ENST00000448223 TIMM21Q9BVV7 248 aa7.55□□□□□ -1.2
SMC6-207ENST00000448223 EML6Q6ZMW3 1958 aa7.55□□□□□ -1.2
SMC6-207ENST00000448223 SRD5A1P18405 259 aa7.55□□□□□ -1.2
SMC6-207ENST00000448223 UPK2O00526 184 aa7.55□□□□□ -1.2
SMC6-207ENST00000448223 FOXI1Q12951 378 aa7.55□□□□□ -1.2
SMC6-207ENST00000448223 RASL10AQ92737 203 aa7.55□□□□□ -1.2
SMC6-207ENST00000448223 IGHV1-45A0A0A0MS14 117 aa7.55□□□□□ -1.2
SMC6-207ENST00000448223 TRAV17A0A0B4J275 112 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms