RNA–Protein interactions for RNA: ENST00000447601.6

FAM3A-215, Transcript of family with sequence similarity 3 member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM3A, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-215ENST00000447601 NIT2Q9NQR4 276 aa15.15■□□□□ 0.02
FAM3A-215ENST00000447601 ZNF253O75346 499 aa15.14■□□□□ 0.01
FAM3A-215ENST00000447601 PSG3Q16557 428 aa15.14■□□□□ 0.01
FAM3A-215ENST00000447601 MRPL54Q6P161 138 aaKnown RBP15.14■□□□□ 0.01
FAM3A-215ENST00000447601 ZNF331Q9NQX6 463 aaPredicted RBP15.14■□□□□ 0.01
FAM3A-215ENST00000447601 H3BUA1 57 aa15.13■□□□□ 0.01
FAM3A-215ENST00000447601 HLA-DQA1P01909 254 aa15.13■□□□□ 0.01
FAM3A-215ENST00000447601 FRMD6-AS1P0C7T7 363 aa15.13■□□□□ 0.01
FAM3A-215ENST00000447601 NEU1Q99519 415 aa15.13■□□□□ 0.01
FAM3A-215ENST00000447601 A8MWL6 223 aa15.13■□□□□ 0.01
FAM3A-215ENST00000447601 BRI3O95415 125 aa15.13■□□□□ 0.01
FAM3A-215ENST00000447601 AMBPP02760 352 aa15.13■□□□□ 0.01
FAM3A-215ENST00000447601 TRGV3P03979 118 aa15.13■□□□□ 0.01
FAM3A-215ENST00000447601 PYY3Q5JQD4 70 aa15.13■□□□□ 0.01
FAM3A-215ENST00000447601 LINC00322Q6ZN03 302 aaPredicted RBP15.13■□□□□ 0.01
FAM3A-215ENST00000447601 NUP35Q8NFH5 326 aa15.13■□□□□ 0.01
FAM3A-215ENST00000447601 WIPF2Q8TF74 440 aaPredicted RBP15.13■□□□□ 0.01
FAM3A-215ENST00000447601 BEX4Q9NWD9 120 aaPredicted RBP15.13■□□□□ 0.01
FAM3A-215ENST00000447601 LINC00527Q9UJ94 153 aa15.13■□□□□ 0.01
FAM3A-215ENST00000447601 PSG8Q9UQ74 426 aa15.13■□□□□ 0.01
FAM3A-215ENST00000447601 UBR5O95071 2799 aaPredicted RBP15.12■□□□□ 0.01
FAM3A-215ENST00000447601 M0R3E3 92 aa15.12■□□□□ 0.01
FAM3A-215ENST00000447601 CRISP2P16562 243 aa15.12■□□□□ 0.01
FAM3A-215ENST00000447601 RAB4BP61018 213 aa15.12■□□□□ 0.01
FAM3A-215ENST00000447601 S100A12P80511 92 aa15.12■□□□□ 0.01
FAM3A-215ENST00000447601 LOXL1Q08397 574 aaPredicted RBP15.12■□□□□ 0.01
FAM3A-215ENST00000447601 GBGT1Q8N5D6 347 aa15.12■□□□□ 0.01
FAM3A-215ENST00000447601 OR4B1Q8NGF8 309 aa15.12■□□□□ 0.01
FAM3A-215ENST00000447601 SVEP1Q4LDE5 3571 aa15.11■□□□□ 0.01
FAM3A-215ENST00000447601 IGHV3OR16-8A0A075B7F1 116 aa15.11■□□□□ 0.01
FAM3A-215ENST00000447601 HIGD1CA8MV81 97 aa15.11■□□□□ 0.01
FAM3A-215ENST00000447601 NPIPB6E9PJ23 425 aa15.11■□□□□ 0.01
FAM3A-215ENST00000447601 ATP5L2Q7Z4Y8 100 aa15.11■□□□□ 0.01
FAM3A-215ENST00000447601 CIARTQ8N365 385 aaPredicted RBP15.11■□□□□ 0.01
FAM3A-215ENST00000447601 TMEM18Q96B42 140 aa15.11■□□□□ 0.01
FAM3A-215ENST00000447601 SMAD5-AS1Q9Y6J3 95 aa15.11■□□□□ 0.01
FAM3A-215ENST00000447601 BUB3O43684 328 aa15.1■□□□□ 0.01
FAM3A-215ENST00000447601 COL8A1P27658 744 aa15.1■□□□□ 0.01
FAM3A-215ENST00000447601 GFRA4Q9GZZ7 299 aa15.1■□□□□ 0.01
FAM3A-215ENST00000447601 SPG11Q96JI7 2443 aa15.1■□□□□ 0.01
FAM3A-215ENST00000447601 A0A087X0K7 114 aa15.1■□□□□ 0.01
FAM3A-215ENST00000447601 TGFAP01135 160 aa15.1■□□□□ 0.01
FAM3A-215ENST00000447601 C1orf194Q5T5A4 169 aa15.1■□□□□ 0.01
FAM3A-215ENST00000447601 METTL26Q96S19 204 aa15.1■□□□□ 0.01
FAM3A-215ENST00000447601 CLPSL1A2RUU4 121 aa15.09■□□□□ 0.01
FAM3A-215ENST00000447601 GRIFINA4D1Z8 144 aa15.09■□□□□ 0.01
FAM3A-215ENST00000447601 FAM231BA6NCW3 169 aa15.09■□□□□ 0.01
FAM3A-215ENST00000447601 FBLL1A6NHQ2 334 aaKnown RBP15.09■□□□□ 0.01
FAM3A-215ENST00000447601 PPIFP30405 207 aaKnown RBP15.09■□□□□ 0.01
FAM3A-215ENST00000447601 TPPP2P59282 170 aa15.09■□□□□ 0.01
FAM3A-215ENST00000447601 DEFB113Q30KQ7 82 aa15.09■□□□□ 0.01
FAM3A-215ENST00000447601 LRRC75A-AS1Q8N1F1 130 aa15.09■□□□□ 0.01
FAM3A-215ENST00000447601 USMG5Q96IX5 58 aa15.09■□□□□ 0.01
FAM3A-215ENST00000447601 ZC2HC1AQ96GY0 325 aa15.08■□□□□ 0.01
FAM3A-215ENST00000447601 ZNF785A8K8V0 405 aa15.08■□□□□ 0
FAM3A-215ENST00000447601 APCSP02743 223 aa15.08■□□□□ 0
FAM3A-215ENST00000447601 KRTAP10-9P60411 292 aa15.08■□□□□ 0
FAM3A-215ENST00000447601 BLCAPP62952 87 aa15.08■□□□□ 0
FAM3A-215ENST00000447601 Q0VG73 95 aa15.08■□□□□ 0
FAM3A-215ENST00000447601 DNLZQ5SXM8 178 aa15.08■□□□□ 0
FAM3A-215ENST00000447601 NOL4LQ96MY1 436 aaPredicted RBP15.08■□□□□ 0
FAM3A-215ENST00000447601 RNF223E7ERA6 249 aa15.07■□□□□ 0
FAM3A-215ENST00000447601 ARL3P36405 182 aa15.07■□□□□ 0
FAM3A-215ENST00000447601 C16orf54Q6UWD8 224 aa15.07■□□□□ 0
FAM3A-215ENST00000447601 TCF24Q7RTU0 167 aa15.07■□□□□ 0
FAM3A-215ENST00000447601 TMEM256Q8N2U0 113 aa15.07■□□□□ 0
FAM3A-215ENST00000447601 DEFB112Q30KQ8 113 aa15.06■□□□□ 0
FAM3A-215ENST00000447601 OR2D3Q8NGH3 330 aa15.06■□□□□ 0
FAM3A-215ENST00000447601 VPS13CQ709C8 3753 aa15.06■□□□□ 0
FAM3A-215ENST00000447601 A0A1B0GUS0 222 aa15.06■□□□□ 0
FAM3A-215ENST00000447601 A0A1B0GXF2 115 aa15.06■□□□□ 0
FAM3A-215ENST00000447601 CHEK1O14757 476 aa15.06■□□□□ 0
FAM3A-215ENST00000447601 CT45A10P0DMU9 189 aa15.06■□□□□ 0
FAM3A-215ENST00000447601 RBPMS2Q6ZRY4 209 aaKnown RBP15.06■□□□□ 0
FAM3A-215ENST00000447601 ZNF580Q9UK33 172 aa15.06■□□□□ 0
FAM3A-215ENST00000447601 CSMD1Q96PZ7 3565 aa15.05■□□□□ 0
FAM3A-215ENST00000447601 OR10J3Q5JRS4 329 aa15.05■□□□□ -0
FAM3A-215ENST00000447601 SAPCD1Q5SSQ6 148 aa15.05■□□□□ -0
FAM3A-215ENST00000447601 BAGE3Q86Y29 109 aa15.05■□□□□ -0
FAM3A-215ENST00000447601 MAPK1IP1LQ8NDC0 245 aa15.05■□□□□ -0
FAM3A-215ENST00000447601 GTSF1Q8WW33 167 aa15.05■□□□□ -0
FAM3A-215ENST00000447601 SLC50A1Q9BRV3 221 aa15.05■□□□□ -0
FAM3A-215ENST00000447601 U3KQE9 123 aa15.05■□□□□ -0
FAM3A-215ENST00000447601 FAM208BQ5VWN6 2430 aa15.04■□□□□ -0
FAM3A-215ENST00000447601 IGHV4-31P0DP07 118 aa15.04■□□□□ -0
FAM3A-215ENST00000447601 ESDP10768 282 aa15.04■□□□□ -0
FAM3A-215ENST00000447601 HBBP68871 147 aa15.04■□□□□ -0
FAM3A-215ENST00000447601 Q5PR19 223 aa15.04■□□□□ -0
FAM3A-215ENST00000447601 Q71RC1 249 aaPredicted RBP15.04■□□□□ -0
FAM3A-215ENST00000447601 TP53TG3Q9ULZ0 132 aa15.04■□□□□ -0
FAM3A-215ENST00000447601 IGKV2-40A0A087WW87 121 aaPredicted RBP15.03■□□□□ -0
FAM3A-215ENST00000447601 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.03■□□□□ -0
FAM3A-215ENST00000447601 IGKV2D-40P01614 121 aaPredicted RBP15.03■□□□□ -0
FAM3A-215ENST00000447601 PF4V1P10720 104 aa15.03■□□□□ -0
FAM3A-215ENST00000447601 JOSD1Q15040 202 aaPredicted RBP15.03■□□□□ -0
FAM3A-215ENST00000447601 KIAA1644Q3SXP7 199 aa15.03■□□□□ -0
FAM3A-215ENST00000447601 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa15.03■□□□□ -0
FAM3A-215ENST00000447601 LRRK2Q5S007 2527 aa15.03■□□□□ -0
FAM3A-215ENST00000447601 IGHV3-66A0A0C4DH42 116 aa15.03■□□□□ -0
FAM3A-215ENST00000447601 A0A0G2JLM5 398 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms