RNA–Protein interactions for RNA: ENST00000439806.6

CPNE1-218, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-218ENST00000439806 Q6ZWC4 215 aa8.13□□□□□ -1.11
CPNE1-218ENST00000439806 REC114Q7Z4M0 266 aa8.13□□□□□ -1.11
CPNE1-218ENST00000439806 ARL6IP6Q8N6S5 226 aa8.13□□□□□ -1.11
CPNE1-218ENST00000439806 C18orf32Q8TCD1 76 aa8.13□□□□□ -1.11
CPNE1-218ENST00000439806 GTSF1Q8WW33 167 aa8.13□□□□□ -1.11
CPNE1-218ENST00000439806 BORCS7Q96B45 105 aa8.13□□□□□ -1.11
CPNE1-218ENST00000439806 SSBP4Q9BWG4 385 aaPredicted RBP8.13□□□□□ -1.11
CPNE1-218ENST00000439806 TPRP12270 2363 aaKnown RBP8.12□□□□□ -1.11
CPNE1-218ENST00000439806 WNK2Q9Y3S1 2297 aa8.12□□□□□ -1.11
CPNE1-218ENST00000439806 TRBV7-1A0A0A6YYK4 115 aa8.12□□□□□ -1.11
CPNE1-218ENST00000439806 TRAV41A0A0B4J266 112 aa8.12□□□□□ -1.11
CPNE1-218ENST00000439806 A0A1W2PS18 150 aa8.12□□□□□ -1.11
CPNE1-218ENST00000439806 VWC2LB2RUY7 222 aa8.12□□□□□ -1.11
CPNE1-218ENST00000439806 G3V318 75 aa8.12□□□□□ -1.11
CPNE1-218ENST00000439806 NTF3P20783 257 aa8.12□□□□□ -1.11
CPNE1-218ENST00000439806 KRTDAPP60985 99 aa8.12□□□□□ -1.11
CPNE1-218ENST00000439806 ATP5G2Q06055 141 aa8.12□□□□□ -1.11
CPNE1-218ENST00000439806 C16orf54Q6UWD8 224 aa8.12□□□□□ -1.11
CPNE1-218ENST00000439806 TMEM219Q86XT9 240 aa8.12□□□□□ -1.11
CPNE1-218ENST00000439806 C8orf49Q96NF6 230 aa8.12□□□□□ -1.11
CPNE1-218ENST00000439806 RCHY1Q96PM5 261 aa8.12□□□□□ -1.11
CPNE1-218ENST00000439806 NRN1Q9NPD7 142 aa8.12□□□□□ -1.11
CPNE1-218ENST00000439806 SPTA1P02549 2419 aa8.11□□□□□ -1.11
CPNE1-218ENST00000439806 IGKV2-40A0A087WW87 121 aaPredicted RBP8.11□□□□□ -1.11
CPNE1-218ENST00000439806 IGHV3-35A0A0C4DH35 117 aa8.11□□□□□ -1.11
CPNE1-218ENST00000439806 LINC01548A6NM66 108 aa8.11□□□□□ -1.11
CPNE1-218ENST00000439806 HSBP1O75506 76 aa8.11□□□□□ -1.11
CPNE1-218ENST00000439806 IGKV2D-40P01614 121 aaPredicted RBP8.11□□□□□ -1.11
CPNE1-218ENST00000439806 CLEC3BP05452 202 aa8.11□□□□□ -1.11
CPNE1-218ENST00000439806 PRB4P10163 310 aaPredicted RBP8.11□□□□□ -1.11
CPNE1-218ENST00000439806 RELQ04864 619 aaPredicted RBP8.11□□□□□ -1.11
CPNE1-218ENST00000439806 SAPCD1Q5SSQ6 148 aa8.11□□□□□ -1.11
CPNE1-218ENST00000439806 RNASEKQ6P5S7 137 aaKnown RBP8.11□□□□□ -1.11
CPNE1-218ENST00000439806 BRD3OSQ6XYD6 125 aa8.11□□□□□ -1.11
CPNE1-218ENST00000439806 CCDC140Q96MF4 163 aa8.11□□□□□ -1.11
CPNE1-218ENST00000439806 ASCL2Q99929 193 aa8.11□□□□□ -1.11
CPNE1-218ENST00000439806 ALKBH7Q9BT30 221 aaPredicted RBP8.11□□□□□ -1.11
CPNE1-218ENST00000439806 ZFAND3Q9H8U3 227 aa8.11□□□□□ -1.11
CPNE1-218ENST00000439806 SPENQ96T58 3664 aaKnown RBP8.1□□□□□ -1.11
CPNE1-218ENST00000439806 BOD1L1Q8NFC6 3051 aa8.1□□□□□ -1.11
CPNE1-218ENST00000439806 IGHV3OR16-8A0A075B7F1 116 aa8.1□□□□□ -1.11
CPNE1-218ENST00000439806 IGHV4-30-2A0A087WSY4 118 aa8.1□□□□□ -1.11
CPNE1-218ENST00000439806 A0A087X0K7 114 aa8.1□□□□□ -1.11
CPNE1-218ENST00000439806 TMEM189A5PLL7 270 aa8.1□□□□□ -1.11
CPNE1-218ENST00000439806 FAM223BA6NKX1 122 aa8.1□□□□□ -1.11
CPNE1-218ENST00000439806 A8MWP6 167 aa8.1□□□□□ -1.11
CPNE1-218ENST00000439806 HAX1O00165 279 aa8.1□□□□□ -1.11
CPNE1-218ENST00000439806 DSCR9P59020 149 aa8.1□□□□□ -1.11
CPNE1-218ENST00000439806 C1orf194Q5T5A4 169 aa8.1□□□□□ -1.11
CPNE1-218ENST00000439806 Q6AWC8 147 aa8.1□□□□□ -1.11
CPNE1-218ENST00000439806 Q71RC1 249 aaPredicted RBP8.1□□□□□ -1.11
CPNE1-218ENST00000439806 FAM223AQ8IWN6 122 aa8.1□□□□□ -1.11
CPNE1-218ENST00000439806 C14orf144Q96I85 54 aa8.1□□□□□ -1.11
CPNE1-218ENST00000439806 METTL26Q96S19 204 aa8.1□□□□□ -1.11
CPNE1-218ENST00000439806 SPOCK3Q9BQ16 436 aa8.1□□□□□ -1.11
CPNE1-218ENST00000439806 SLC50A1Q9BRV3 221 aa8.1□□□□□ -1.11
CPNE1-218ENST00000439806 NDFIP1Q9BT67 221 aa8.1□□□□□ -1.11
CPNE1-218ENST00000439806 MEGF9Q9H1U4 602 aa8.1□□□□□ -1.11
CPNE1-218ENST00000439806 SMAD5-AS1Q9Y6J3 95 aa8.1□□□□□ -1.11
CPNE1-218ENST00000439806 CFAP47Q6ZTR5 3102 aa8.09□□□□□ -1.11
CPNE1-218ENST00000439806 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.09□□□□□ -1.11
CPNE1-218ENST00000439806 KIR2DL5BA0A0G2JN68 375 aa8.09□□□□□ -1.11
CPNE1-218ENST00000439806 KIR2DL5BA0A0G2JPC4 375 aa8.09□□□□□ -1.11
CPNE1-218ENST00000439806 A0A1B0GUT8 65 aa8.09□□□□□ -1.11
CPNE1-218ENST00000439806 A0A1B0GW15 77 aa8.09□□□□□ -1.11
CPNE1-218ENST00000439806 SH2D1AO60880 128 aa8.09□□□□□ -1.11
CPNE1-218ENST00000439806 TRGV3P03979 118 aa8.09□□□□□ -1.11
CPNE1-218ENST00000439806 MSMBP08118 114 aa8.09□□□□□ -1.11
CPNE1-218ENST00000439806 PAX1P15863 534 aa8.09□□□□□ -1.11
CPNE1-218ENST00000439806 CRIP2P52943 208 aaPredicted RBP8.09□□□□□ -1.11
CPNE1-218ENST00000439806 RPS20P60866 119 aaKnown RBP8.09□□□□□ -1.11
CPNE1-218ENST00000439806 LY6EQ16553 131 aa8.09□□□□□ -1.11
CPNE1-218ENST00000439806 TEX43Q6ZNM6 134 aa8.09□□□□□ -1.11
CPNE1-218ENST00000439806 KIR2DL5AQ8N109 375 aa8.09□□□□□ -1.11
CPNE1-218ENST00000439806 NDUFAF3Q9BU61 184 aa8.09□□□□□ -1.11
CPNE1-218ENST00000439806 VAMP8Q9BV40 100 aa8.09□□□□□ -1.11
CPNE1-218ENST00000439806 LOC102724200A0A096LPH7 203 aaPredicted RBP8.08□□□□□ -1.12
CPNE1-218ENST00000439806 M0R2Z0 102 aa8.08□□□□□ -1.12
CPNE1-218ENST00000439806 IGHV4-38-2P0DP08 117 aa8.08□□□□□ -1.12
CPNE1-218ENST00000439806 CD33P20138 364 aa8.08□□□□□ -1.12
CPNE1-218ENST00000439806 HLA-DMBP28068 263 aa8.08□□□□□ -1.12
CPNE1-218ENST00000439806 BMI1P35226 326 aa8.08□□□□□ -1.12
CPNE1-218ENST00000439806 FOXA3P55318 350 aaPredicted RBP8.08□□□□□ -1.12
CPNE1-218ENST00000439806 IGFL4Q6B9Z1 124 aa8.08□□□□□ -1.12
CPNE1-218ENST00000439806 NIT1Q86X76 327 aa8.08□□□□□ -1.12
CPNE1-218ENST00000439806 FAM19A2Q8N3H0 131 aa8.08□□□□□ -1.12
CPNE1-218ENST00000439806 ATP6V0BQ99437 205 aa8.08□□□□□ -1.12
CPNE1-218ENST00000439806 BSNQ9UPA5 3926 aa8.08□□□□□ -1.12
CPNE1-218ENST00000439806 ATRXP46100 2492 aa8.08□□□□□ -1.12
CPNE1-218ENST00000439806 CEP295Q9C0D2 2601 aa8.08□□□□□ -1.12
CPNE1-218ENST00000439806 ATMQ13315 3056 aa8.08□□□□□ -1.12
CPNE1-218ENST00000439806 ABCA1O95477 2261 aa8.07□□□□□ -1.12
CPNE1-218ENST00000439806 IGHV3-66A0A0C4DH42 116 aa8.07□□□□□ -1.12
CPNE1-218ENST00000439806 A6NDX4 124 aa8.07□□□□□ -1.12
CPNE1-218ENST00000439806 H3BUX3 64 aa8.07□□□□□ -1.12
CPNE1-218ENST00000439806 M0QZK8 103 aa8.07□□□□□ -1.12
CPNE1-218ENST00000439806 BUB3O43684 328 aa8.07□□□□□ -1.12
CPNE1-218ENST00000439806 APOHP02749 345 aaPredicted RBP8.07□□□□□ -1.12
CPNE1-218ENST00000439806 ARMS2P0C7Q2 107 aa8.07□□□□□ -1.12
CPNE1-218ENST00000439806 SLC25A16P16260 332 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 987.9 ms