RNA–Protein interactions for RNA: ENST00000436675.5

HDAC8-213, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-213ENST00000436675 SNURFLB1AK76 121 aa10.13□□□□□ -0.79
HDAC8-213ENST00000436675 SNRPCP09234 159 aaKnown RBP10.13□□□□□ -0.79
HDAC8-213ENST00000436675 ICAM4Q14773 271 aa10.13□□□□□ -0.79
HDAC8-213ENST00000436675 C15orf40Q8WUR7 153 aa10.13□□□□□ -0.79
HDAC8-213ENST00000436675 VSIG2Q96IQ7 327 aa10.13□□□□□ -0.79
HDAC8-213ENST00000436675 SHANK2-AS3Q9BTD1 123 aa10.13□□□□□ -0.79
HDAC8-213ENST00000436675 HIGD1AQ9Y241 93 aa10.13□□□□□ -0.79
HDAC8-213ENST00000436675 A0A087WXM4 84 aa10.12□□□□□ -0.79
HDAC8-213ENST00000436675 SMCO3A2RU48 225 aa10.12□□□□□ -0.79
HDAC8-213ENST00000436675 H3BNG1 76 aa10.12□□□□□ -0.79
HDAC8-213ENST00000436675 FAM229AH3BQW9 127 aa10.12□□□□□ -0.79
HDAC8-213ENST00000436675 WRBO00258 174 aa10.12□□□□□ -0.79
HDAC8-213ENST00000436675 NXPH4O95158 308 aa10.12□□□□□ -0.79
HDAC8-213ENST00000436675 OR5G3P0C626 314 aa10.12□□□□□ -0.79
HDAC8-213ENST00000436675 RPL7P18124 248 aaKnown RBP10.12□□□□□ -0.79
HDAC8-213ENST00000436675 S100A7P31151 101 aa10.12□□□□□ -0.79
HDAC8-213ENST00000436675 RAP2BP61225 183 aa10.12□□□□□ -0.79
HDAC8-213ENST00000436675 Q6ZTI0 123 aa10.12□□□□□ -0.79
HDAC8-213ENST00000436675 TMED4Q7Z7H5 227 aa10.12□□□□□ -0.79
HDAC8-213ENST00000436675 CCDC190Q86UF4 302 aa10.12□□□□□ -0.79
HDAC8-213ENST00000436675 AP3S1Q92572 193 aa10.12□□□□□ -0.79
HDAC8-213ENST00000436675 PRRT1Q99946 306 aa10.12□□□□□ -0.79
HDAC8-213ENST00000436675 MIXL1Q9H2W2 232 aa10.12□□□□□ -0.79
HDAC8-213ENST00000436675 A0A087WTM6 91 aa10.11□□□□□ -0.79
HDAC8-213ENST00000436675 PRSS46E5RG02 174 aa10.11□□□□□ -0.79
HDAC8-213ENST00000436675 H3BP45 60 aa10.11□□□□□ -0.79
HDAC8-213ENST00000436675 PITX3O75364 302 aa10.11□□□□□ -0.79
HDAC8-213ENST00000436675 IL5P05113 134 aa10.11□□□□□ -0.79
HDAC8-213ENST00000436675 SSBP1Q04837 148 aaKnown RBP10.11□□□□□ -0.79
HDAC8-213ENST00000436675 GFI1BQ5VTD9 330 aa10.11□□□□□ -0.79
HDAC8-213ENST00000436675 NAA50Q9GZZ1 169 aaKnown RBP10.11□□□□□ -0.79
HDAC8-213ENST00000436675 RGS5O15539 181 aa10.1□□□□□ -0.79
HDAC8-213ENST00000436675 HYPMO75409 117 aa10.1□□□□□ -0.79
HDAC8-213ENST00000436675 SPANXN5Q5MJ07 72 aa10.1□□□□□ -0.79
HDAC8-213ENST00000436675 CYP2G1PQ6ZSU1 146 aa10.1□□□□□ -0.79
HDAC8-213ENST00000436675 ACOT7LQ6ZUV0 252 aa10.1□□□□□ -0.79
HDAC8-213ENST00000436675 SMIM4Q8WVI0 70 aa10.1□□□□□ -0.79
HDAC8-213ENST00000436675 TRGV2A0A075B6R0 118 aa10.09□□□□□ -0.79
HDAC8-213ENST00000436675 A0A087X0K7 114 aa10.09□□□□□ -0.79
HDAC8-213ENST00000436675 TRAV12-3A0A0B4J271 114 aa10.09□□□□□ -0.79
HDAC8-213ENST00000436675 PRAC2D3DTV9 90 aa10.09□□□□□ -0.79
HDAC8-213ENST00000436675 H3BTX0 84 aa10.09□□□□□ -0.79
HDAC8-213ENST00000436675 MED6O75586 246 aa10.09□□□□□ -0.79
HDAC8-213ENST00000436675 ANXA3P12429 323 aa10.09□□□□□ -0.79
HDAC8-213ENST00000436675 ANXA7P20073 488 aaKnown RBP10.09□□□□□ -0.79
HDAC8-213ENST00000436675 GCSHP23434 173 aa10.09□□□□□ -0.79
HDAC8-213ENST00000436675 RPP30P78346 268 aaKnown RBP10.09□□□□□ -0.79
HDAC8-213ENST00000436675 Q6ZSN1 163 aa10.09□□□□□ -0.79
HDAC8-213ENST00000436675 C20orf144Q9BQM9 153 aa10.09□□□□□ -0.79
HDAC8-213ENST00000436675 MCUBQ9NWR8 336 aa10.09□□□□□ -0.79
HDAC8-213ENST00000436675 PMS2P5A8MQ11 134 aa10.08□□□□□ -0.8
HDAC8-213ENST00000436675 CTDSP2O14595 271 aa10.08□□□□□ -0.8
HDAC8-213ENST00000436675 SYNGR2O43760 224 aa10.08□□□□□ -0.8
HDAC8-213ENST00000436675 LINC00869P0C866 280 aa10.08□□□□□ -0.8
HDAC8-213ENST00000436675 SRPXP78539 464 aa10.08□□□□□ -0.8
HDAC8-213ENST00000436675 MRPS10P82664 201 aaKnown RBP10.08□□□□□ -0.8
HDAC8-213ENST00000436675 SCGB3A2Q96PL1 93 aa10.08□□□□□ -0.8
HDAC8-213ENST00000436675 SCP2D1Q9UJQ7 156 aa10.08□□□□□ -0.8
HDAC8-213ENST00000436675 IL18Q14116 193 aa10.07□□□□□ -0.8
HDAC8-213ENST00000436675 NFE4Q86UQ8 179 aa10.07□□□□□ -0.8
HDAC8-213ENST00000436675 CIB3Q96Q77 187 aaPredicted RBP10.07□□□□□ -0.8
HDAC8-213ENST00000436675 ARL6Q9H0F7 186 aa10.07□□□□□ -0.8
HDAC8-213ENST00000436675 GSN-AS1Q9NRJ2 163 aa10.07□□□□□ -0.8
HDAC8-213ENST00000436675 TRGV1A0A0A0MS02 117 aa10.06□□□□□ -0.8
HDAC8-213ENST00000436675 LINC00854A0A1B0GVQ3 168 aa10.06□□□□□ -0.8
HDAC8-213ENST00000436675 ANKRD20A5PA0PJZ0 165 aa10.06□□□□□ -0.8
HDAC8-213ENST00000436675 DAZ2Q13117 558 aaKnown RBP10.06□□□□□ -0.8
HDAC8-213ENST00000436675 PATE2Q6UY27 113 aa10.06□□□□□ -0.8
HDAC8-213ENST00000436675 STRAPQ9Y3F4 350 aaKnown RBP10.06□□□□□ -0.8
HDAC8-213ENST00000436675 ICOSQ9Y6W8 199 aa10.06□□□□□ -0.8
HDAC8-213ENST00000436675 UBR4Q5T4S7 5183 aa10.06□□□□□ -0.8
HDAC8-213ENST00000436675 SLC17A3O00476 420 aa10.05□□□□□ -0.8
HDAC8-213ENST00000436675 MRPS12O15235 138 aaKnown RBP10.05□□□□□ -0.8
HDAC8-213ENST00000436675 PAX4O43316 350 aa10.05□□□□□ -0.8
HDAC8-213ENST00000436675 IGHV3-53P01767 116 aa10.05□□□□□ -0.8
HDAC8-213ENST00000436675 RRAS2P62070 204 aaPredicted RBP10.05□□□□□ -0.8
HDAC8-213ENST00000436675 CTF1Q16619 201 aa10.05□□□□□ -0.8
HDAC8-213ENST00000436675 ZNF331Q9NQX6 463 aaPredicted RBP10.05□□□□□ -0.8
HDAC8-213ENST00000436675 FUT9Q9Y231 359 aa10.05□□□□□ -0.8
HDAC8-213ENST00000436675 DNAH8Q96JB1 4490 aa10.04□□□□□ -0.8
HDAC8-213ENST00000436675 DUXBA0A1W2PPF3 345 aa10.04□□□□□ -0.8
HDAC8-213ENST00000436675 HOXB5P09067 269 aa10.04□□□□□ -0.8
HDAC8-213ENST00000436675 CT45A10P0DMU9 189 aa10.04□□□□□ -0.8
HDAC8-213ENST00000436675 VAMP1P23763 118 aa10.04□□□□□ -0.8
HDAC8-213ENST00000436675 PLP1P60201 277 aa10.04□□□□□ -0.8
HDAC8-213ENST00000436675 LYPD5Q6UWN5 251 aa10.04□□□□□ -0.8
HDAC8-213ENST00000436675 LCN15Q6UWW0 184 aa10.04□□□□□ -0.8
HDAC8-213ENST00000436675 DIRAS2Q96HU8 199 aa10.04□□□□□ -0.8
HDAC8-213ENST00000436675 ARV1Q9H2C2 271 aa10.04□□□□□ -0.8
HDAC8-213ENST00000436675 ZNF324O75467 553 aaPredicted RBP10.03□□□□□ -0.8
HDAC8-213ENST00000436675 CCNKO75909 580 aa10.03□□□□□ -0.8
HDAC8-213ENST00000436675 SLC25A6P12236 298 aa10.03□□□□□ -0.8
HDAC8-213ENST00000436675 LEPP41159 167 aa10.03□□□□□ -0.8
HDAC8-213ENST00000436675 ZBTB8BQ8NAP8 495 aaPredicted RBP10.03□□□□□ -0.8
HDAC8-213ENST00000436675 ZNF431Q8TF32 576 aaPredicted RBP10.03□□□□□ -0.8
HDAC8-213ENST00000436675 PYGO2Q9BRQ0 406 aa10.03□□□□□ -0.8
HDAC8-213ENST00000436675 SLC50A1Q9BRV3 221 aa10.03□□□□□ -0.8
HDAC8-213ENST00000436675 MSRB1Q9NZV6 116 aa10.03□□□□□ -0.8
HDAC8-213ENST00000436675 RABL2BQ9UNT1 228 aa10.03□□□□□ -0.8
HDAC8-213ENST00000436675 TRAV9-2A0A087WT02 112 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms