RNA–Protein interactions for RNA: ENST00000435201.5

LIMK1-203, Transcript of LIM domain kinase 1, humanhuman

TSL 1 (best)

Gene LIMK1, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-203ENST00000435201 GPR183P32249 361 aa13.03□□□□□ -0.32
LIMK1-203ENST00000435201 DEFA6Q01524 100 aa13.03□□□□□ -0.32
LIMK1-203ENST00000435201 SIGLECL1Q8N7X8 197 aa13.03□□□□□ -0.32
LIMK1-203ENST00000435201 PRO1933Q9H354 126 aa13.03□□□□□ -0.32
LIMK1-203ENST00000435201 CAMPP49913 170 aa13.02□□□□□ -0.32
LIMK1-203ENST00000435201 RAB9AP51151 201 aa13.02□□□□□ -0.32
LIMK1-203ENST00000435201 Q6ZWC4 215 aa13.02□□□□□ -0.32
LIMK1-203ENST00000435201 ZNF664Q8N3J9 261 aa13.02□□□□□ -0.32
LIMK1-203ENST00000435201 ZC2HC1AQ96GY0 325 aa13.02□□□□□ -0.32
LIMK1-203ENST00000435201 FBLL1A6NHQ2 334 aaKnown RBP13.02□□□□□ -0.33
LIMK1-203ENST00000435201 M0R3E3 92 aa13.02□□□□□ -0.33
LIMK1-203ENST00000435201 GPX1P07203 203 aa13.02□□□□□ -0.33
LIMK1-203ENST00000435201 ATP5J2P56134 94 aa13.02□□□□□ -0.33
LIMK1-203ENST00000435201 KLF5Q13887 457 aaPredicted RBP13.02□□□□□ -0.33
LIMK1-203ENST00000435201 OR2D3Q8NGH3 330 aa13.02□□□□□ -0.33
LIMK1-203ENST00000435201 C18orf32Q8TCD1 76 aa13.02□□□□□ -0.33
LIMK1-203ENST00000435201 EEF1AKMT3Q96AZ1 226 aa13.02□□□□□ -0.33
LIMK1-203ENST00000435201 SPOCK3Q9BQ16 436 aa13.02□□□□□ -0.33
LIMK1-203ENST00000435201 MED13LQ71F56 2210 aa13.01□□□□□ -0.33
LIMK1-203ENST00000435201 TRAV40A0A0B4J280 105 aa13.01□□□□□ -0.33
LIMK1-203ENST00000435201 PGLYRP4Q96LB8 373 aa13.01□□□□□ -0.33
LIMK1-203ENST00000435201 RCHY1Q96PM5 261 aa13.01□□□□□ -0.33
LIMK1-203ENST00000435201 MEGF9Q9H1U4 602 aa13.01□□□□□ -0.33
LIMK1-203ENST00000435201 ABCA2Q9BZC7 2435 aa13□□□□□ -0.33
LIMK1-203ENST00000435201 TRBV7-1A0A0A6YYK4 115 aa13□□□□□ -0.33
LIMK1-203ENST00000435201 A0A1W2PS18 150 aa13□□□□□ -0.33
LIMK1-203ENST00000435201 G3V318 75 aa13□□□□□ -0.33
LIMK1-203ENST00000435201 CLEC3BP05452 202 aa13□□□□□ -0.33
LIMK1-203ENST00000435201 FOXA3P55318 350 aaPredicted RBP13□□□□□ -0.33
LIMK1-203ENST00000435201 TOMM20LQ6UXN7 152 aa13□□□□□ -0.33
LIMK1-203ENST00000435201 ZFAND3Q9H8U3 227 aa13□□□□□ -0.33
LIMK1-203ENST00000435201 AKAP6Q13023 2319 aa13□□□□□ -0.33
LIMK1-203ENST00000435201 IGHV3OR16-10A0A075B7F0 116 aa12.99□□□□□ -0.33
LIMK1-203ENST00000435201 A8MWP6 167 aa12.99□□□□□ -0.33
LIMK1-203ENST00000435201 CT45A10P0DMU9 189 aa12.99□□□□□ -0.33
LIMK1-203ENST00000435201 CRIP2P52943 208 aaPredicted RBP12.99□□□□□ -0.33
LIMK1-203ENST00000435201 ATP6V0BQ99437 205 aa12.99□□□□□ -0.33
LIMK1-203ENST00000435201 ALKBH7Q9BT30 221 aaPredicted RBP12.99□□□□□ -0.33
LIMK1-203ENST00000435201 SSBP4Q9BWG4 385 aaPredicted RBP12.99□□□□□ -0.33
LIMK1-203ENST00000435201 SH2D7A6NKC9 451 aaPredicted RBP12.99□□□□□ -0.33
LIMK1-203ENST00000435201 LINC01548A6NM66 108 aa12.99□□□□□ -0.33
LIMK1-203ENST00000435201 ZNF785A8K8V0 405 aa12.99□□□□□ -0.33
LIMK1-203ENST00000435201 ZNF324O75467 553 aaPredicted RBP12.99□□□□□ -0.33
LIMK1-203ENST00000435201 AMTP48728 403 aa12.99□□□□□ -0.33
LIMK1-203ENST00000435201 CCDC140Q96MF4 163 aa12.99□□□□□ -0.33
LIMK1-203ENST00000435201 IGHV4-30-2A0A087WSY4 118 aa12.98□□□□□ -0.33
LIMK1-203ENST00000435201 ZNF705FA8MVS1 300 aaPredicted RBP12.98□□□□□ -0.33
LIMK1-203ENST00000435201 HAX1O00165 279 aa12.98□□□□□ -0.33
LIMK1-203ENST00000435201 ZNF705DP0CH99 300 aaPredicted RBP12.98□□□□□ -0.33
LIMK1-203ENST00000435201 ZNF705BP0CI00 300 aaPredicted RBP12.98□□□□□ -0.33
LIMK1-203ENST00000435201 FAM209BQ5JX69 171 aa12.98□□□□□ -0.33
LIMK1-203ENST00000435201 TMEM219Q86XT9 240 aa12.98□□□□□ -0.33
LIMK1-203ENST00000435201 PIFOQ8TCI5 191 aa12.98□□□□□ -0.33
LIMK1-203ENST00000435201 SMAD5-AS1Q9Y6J3 95 aa12.98□□□□□ -0.33
LIMK1-203ENST00000435201 CFAP46Q8IYW2 2715 aa12.98□□□□□ -0.33
LIMK1-203ENST00000435201 A0A087X0K7 114 aa12.97□□□□□ -0.33
LIMK1-203ENST00000435201 TRAV41A0A0B4J266 112 aa12.97□□□□□ -0.33
LIMK1-203ENST00000435201 Q6AWC8 147 aa12.97□□□□□ -0.33
LIMK1-203ENST00000435201 BRD3OSQ6XYD6 125 aa12.97□□□□□ -0.33
LIMK1-203ENST00000435201 Q71RC1 249 aaPredicted RBP12.97□□□□□ -0.33
LIMK1-203ENST00000435201 FAM223BA6NKX1 122 aa12.97□□□□□ -0.33
LIMK1-203ENST00000435201 PMCHP20382 165 aa12.97□□□□□ -0.33
LIMK1-203ENST00000435201 RELQ04864 619 aaPredicted RBP12.97□□□□□ -0.33
LIMK1-203ENST00000435201 ATP5G2Q06055 141 aa12.97□□□□□ -0.33
LIMK1-203ENST00000435201 C19orf54Q5BKX5 351 aa12.97□□□□□ -0.33
LIMK1-203ENST00000435201 SAPCD1Q5SSQ6 148 aa12.97□□□□□ -0.33
LIMK1-203ENST00000435201 FAM162BQ5T6X4 162 aa12.97□□□□□ -0.33
LIMK1-203ENST00000435201 CLEC19AQ6UXS0 136 aa12.97□□□□□ -0.33
LIMK1-203ENST00000435201 COX8CQ7Z4L0 72 aa12.97□□□□□ -0.33
LIMK1-203ENST00000435201 REC114Q7Z4M0 266 aa12.97□□□□□ -0.33
LIMK1-203ENST00000435201 FAM223AQ8IWN6 122 aa12.97□□□□□ -0.33
LIMK1-203ENST00000435201 NRN1Q9NPD7 142 aa12.97□□□□□ -0.33
LIMK1-203ENST00000435201 DOPEY1Q5JWR5 2465 aa12.96□□□□□ -0.33
LIMK1-203ENST00000435201 CHEK1O14757 476 aa12.96□□□□□ -0.33
LIMK1-203ENST00000435201 BUB3O43684 328 aa12.96□□□□□ -0.33
LIMK1-203ENST00000435201 APOHP02749 345 aaPredicted RBP12.96□□□□□ -0.33
LIMK1-203ENST00000435201 MSMBP08118 114 aa12.96□□□□□ -0.33
LIMK1-203ENST00000435201 DSCR9P59020 149 aa12.96□□□□□ -0.33
LIMK1-203ENST00000435201 IGHV3-35A0A0C4DH35 117 aa12.95□□□□□ -0.34
LIMK1-203ENST00000435201 A0A1B0GW15 77 aa12.95□□□□□ -0.34
LIMK1-203ENST00000435201 CRIP1P50238 77 aa12.95□□□□□ -0.34
LIMK1-203ENST00000435201 C1orf194Q5T5A4 169 aa12.95□□□□□ -0.34
LIMK1-203ENST00000435201 TEX43Q6ZNM6 134 aa12.95□□□□□ -0.34
LIMK1-203ENST00000435201 C14orf144Q96I85 54 aa12.95□□□□□ -0.34
LIMK1-203ENST00000435201 C8orf49Q96NF6 230 aa12.95□□□□□ -0.34
LIMK1-203ENST00000435201 IGSF10Q6WRI0 2623 aa12.95□□□□□ -0.34
LIMK1-203ENST00000435201 A0A1B0GUT8 65 aa12.95□□□□□ -0.34
LIMK1-203ENST00000435201 RNF224P0DH78 156 aa12.95□□□□□ -0.34
LIMK1-203ENST00000435201 IGHV4-38-2P0DP08 117 aa12.95□□□□□ -0.34
LIMK1-203ENST00000435201 RIGQ13278 110 aa12.95□□□□□ -0.34
LIMK1-203ENST00000435201 ASH1LQ9NR48 2969 aaKnown RBP12.95□□□□□ -0.34
LIMK1-203ENST00000435201 IGHV3OR16-8A0A075B7F1 116 aa12.94□□□□□ -0.34
LIMK1-203ENST00000435201 IGKV2-40A0A087WW87 121 aaPredicted RBP12.94□□□□□ -0.34
LIMK1-203ENST00000435201 KIR2DL5BA0A0G2JN68 375 aa12.94□□□□□ -0.34
LIMK1-203ENST00000435201 KIR2DL5BA0A0G2JPC4 375 aa12.94□□□□□ -0.34
LIMK1-203ENST00000435201 HSBP1O75506 76 aa12.94□□□□□ -0.34
LIMK1-203ENST00000435201 IGKV2D-40P01614 121 aaPredicted RBP12.94□□□□□ -0.34
LIMK1-203ENST00000435201 CD33P20138 364 aa12.94□□□□□ -0.34
LIMK1-203ENST00000435201 KIR2DL5AQ8N109 375 aa12.94□□□□□ -0.34
LIMK1-203ENST00000435201 METTL26Q96S19 204 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms