RNA–Protein interactions for RNA: ENST00000426447.3

PDAP1-202, Transcript of PDGFA associated protein 1, humanhuman

TSL 5

Gene PDAP1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-202ENST00000426447 LINC00612Q8N6U2 182 aa10.06□□□□□ -0.8
PDAP1-202ENST00000426447 RPUSD4Q96CM3 377 aaKnown RBP10.06□□□□□ -0.8
PDAP1-202ENST00000426447 HIGD1AQ9Y241 93 aa10.06□□□□□ -0.8
PDAP1-202ENST00000426447 H3BRN7 92 aa10.05□□□□□ -0.8
PDAP1-202ENST00000426447 MED6O75586 246 aa10.05□□□□□ -0.8
PDAP1-202ENST00000426447 IL5P05113 134 aa10.05□□□□□ -0.8
PDAP1-202ENST00000426447 OR5G3P0C626 314 aa10.05□□□□□ -0.8
PDAP1-202ENST00000426447 MRPS10P82664 201 aaKnown RBP10.05□□□□□ -0.8
PDAP1-202ENST00000426447 C20orf144Q9BQM9 153 aa10.05□□□□□ -0.8
PDAP1-202ENST00000426447 SHANK2-AS3Q9BTD1 123 aa10.05□□□□□ -0.8
PDAP1-202ENST00000426447 TNFRSF18Q9Y5U5 241 aa10.05□□□□□ -0.8
PDAP1-202ENST00000426447 A0A096LPF7 62 aa10.04□□□□□ -0.8
PDAP1-202ENST00000426447 PIGBOS1A0A0B4J2F0 54 aa10.04□□□□□ -0.8
PDAP1-202ENST00000426447 RGS5O15539 181 aa10.04□□□□□ -0.8
PDAP1-202ENST00000426447 HYPMO75409 117 aa10.04□□□□□ -0.8
PDAP1-202ENST00000426447 ANXA7P20073 488 aaKnown RBP10.04□□□□□ -0.8
PDAP1-202ENST00000426447 S100A7AQ86SG5 101 aa10.04□□□□□ -0.8
PDAP1-202ENST00000426447 CCDC190Q86UF4 302 aa10.04□□□□□ -0.8
PDAP1-202ENST00000426447 NFE4Q86UQ8 179 aa10.04□□□□□ -0.8
PDAP1-202ENST00000426447 CIB3Q96Q77 187 aaPredicted RBP10.04□□□□□ -0.8
PDAP1-202ENST00000426447 TMPRSS5Q9H3S3 457 aa10.04□□□□□ -0.8
PDAP1-202ENST00000426447 SCP2D1Q9UJQ7 156 aa10.04□□□□□ -0.8
PDAP1-202ENST00000426447 TRGV2A0A075B6R0 118 aa10.03□□□□□ -0.8
PDAP1-202ENST00000426447 SMCO3A2RU48 225 aa10.03□□□□□ -0.8
PDAP1-202ENST00000426447 J3KRW8 73 aa10.03□□□□□ -0.8
PDAP1-202ENST00000426447 WRBO00258 174 aa10.03□□□□□ -0.8
PDAP1-202ENST00000426447 KIR3DS1Q14943 382 aa10.03□□□□□ -0.8
PDAP1-202ENST00000426447 SPANXN5Q5MJ07 72 aa10.03□□□□□ -0.8
PDAP1-202ENST00000426447 TMED4Q7Z7H5 227 aa10.03□□□□□ -0.8
PDAP1-202ENST00000426447 PARD6GQ9BYG4 376 aaPredicted RBP10.03□□□□□ -0.8
PDAP1-202ENST00000426447 A0A087WTM6 91 aa10.02□□□□□ -0.81
PDAP1-202ENST00000426447 PITX3O75364 302 aa10.02□□□□□ -0.81
PDAP1-202ENST00000426447 NXPH4O95158 308 aa10.02□□□□□ -0.81
PDAP1-202ENST00000426447 DNAH10OSP0CZ25 163 aa10.02□□□□□ -0.81
PDAP1-202ENST00000426447 GCSHP23434 173 aa10.02□□□□□ -0.81
PDAP1-202ENST00000426447 GFI1BQ5VTD9 330 aa10.02□□□□□ -0.81
PDAP1-202ENST00000426447 Q6ZSN1 163 aa10.02□□□□□ -0.81
PDAP1-202ENST00000426447 CYP2G1PQ6ZSU1 146 aa10.02□□□□□ -0.81
PDAP1-202ENST00000426447 Q6ZTI0 123 aa10.02□□□□□ -0.81
PDAP1-202ENST00000426447 SMIM4Q8WVI0 70 aa10.02□□□□□ -0.81
PDAP1-202ENST00000426447 VSIG2Q96IQ7 327 aa10.02□□□□□ -0.81
PDAP1-202ENST00000426447 MCUBQ9NWR8 336 aa10.02□□□□□ -0.81
PDAP1-202ENST00000426447 TRAV9-2A0A087WT02 112 aa10.01□□□□□ -0.81
PDAP1-202ENST00000426447 A0A087X0K7 114 aa10.01□□□□□ -0.81
PDAP1-202ENST00000426447 PRSS46E5RG02 174 aa10.01□□□□□ -0.81
PDAP1-202ENST00000426447 SYNGR2O43760 224 aa10.01□□□□□ -0.81
PDAP1-202ENST00000426447 LINC00869P0C866 280 aa10.01□□□□□ -0.81
PDAP1-202ENST00000426447 FAT1Q14517 4588 aa10.01□□□□□ -0.81
PDAP1-202ENST00000426447 TRAV12-3A0A0B4J271 114 aa10□□□□□ -0.81
PDAP1-202ENST00000426447 DUXBA0A1W2PPF3 345 aa10□□□□□ -0.81
PDAP1-202ENST00000426447 PMS2P5A8MQ11 134 aa10□□□□□ -0.81
PDAP1-202ENST00000426447 SNRPCP09234 159 aaKnown RBP10□□□□□ -0.81
PDAP1-202ENST00000426447 DAZ2Q13117 558 aaKnown RBP10□□□□□ -0.81
PDAP1-202ENST00000426447 IL18Q14116 193 aa10□□□□□ -0.81
PDAP1-202ENST00000426447 ACOT7LQ6ZUV0 252 aa10□□□□□ -0.81
PDAP1-202ENST00000426447 MIXL1Q9H2W2 232 aa10□□□□□ -0.81
PDAP1-202ENST00000426447 RNF24Q9Y225 148 aa10□□□□□ -0.81
PDAP1-202ENST00000426447 STRAPQ9Y3F4 350 aaKnown RBP10□□□□□ -0.81
PDAP1-202ENST00000426447 ICOSQ9Y6W8 199 aa10□□□□□ -0.81
PDAP1-202ENST00000426447 H3BP45 60 aa9.99□□□□□ -0.81
PDAP1-202ENST00000426447 PAX4O43316 350 aa9.99□□□□□ -0.81
PDAP1-202ENST00000426447 SLC25A6P12236 298 aa9.99□□□□□ -0.81
PDAP1-202ENST00000426447 SELENOTP62341 195 aa9.99□□□□□ -0.81
PDAP1-202ENST00000426447 HAMPP81172 84 aa9.99□□□□□ -0.81
PDAP1-202ENST00000426447 LCN15Q6UWW0 184 aa9.99□□□□□ -0.81
PDAP1-202ENST00000426447 ARL6Q9H0F7 186 aa9.99□□□□□ -0.81
PDAP1-202ENST00000426447 ZNF331Q9NQX6 463 aaPredicted RBP9.99□□□□□ -0.81
PDAP1-202ENST00000426447 TRGV1A0A0A0MS02 117 aa9.98□□□□□ -0.81
PDAP1-202ENST00000426447 ANKRD20A5PA0PJZ0 165 aa9.98□□□□□ -0.81
PDAP1-202ENST00000426447 CTDSP2O14595 271 aa9.98□□□□□ -0.81
PDAP1-202ENST00000426447 SMIM18P0DKX4 95 aa9.98□□□□□ -0.81
PDAP1-202ENST00000426447 CXCL2P19875 107 aa9.98□□□□□ -0.81
PDAP1-202ENST00000426447 LEPP41159 167 aa9.98□□□□□ -0.81
PDAP1-202ENST00000426447 PLP1P60201 277 aa9.98□□□□□ -0.81
PDAP1-202ENST00000426447 PYGO2Q9BRQ0 406 aa9.98□□□□□ -0.81
PDAP1-202ENST00000426447 SLC50A1Q9BRV3 221 aa9.98□□□□□ -0.81
PDAP1-202ENST00000426447 NAA50Q9GZZ1 169 aaKnown RBP9.98□□□□□ -0.81
PDAP1-202ENST00000426447 GSN-AS1Q9NRJ2 163 aa9.98□□□□□ -0.81
PDAP1-202ENST00000426447 FUT9Q9Y231 359 aa9.98□□□□□ -0.81
PDAP1-202ENST00000426447 PRAC2D3DTV9 90 aa9.97□□□□□ -0.81
PDAP1-202ENST00000426447 CTDSPLO15194 276 aa9.97□□□□□ -0.81
PDAP1-202ENST00000426447 VAMP1P23763 118 aa9.97□□□□□ -0.81
PDAP1-202ENST00000426447 DIRAS2Q96HU8 199 aa9.97□□□□□ -0.81
PDAP1-202ENST00000426447 ARV1Q9H2C2 271 aa9.97□□□□□ -0.81
PDAP1-202ENST00000426447 LY96Q9Y6Y9 160 aa9.97□□□□□ -0.81
PDAP1-202ENST00000426447 FLG2Q5D862 2391 aaPredicted RBP9.97□□□□□ -0.81
PDAP1-202ENST00000426447 MYCBP2O75592 4640 aa9.97□□□□□ -0.81
PDAP1-202ENST00000426447 ZNF324O75467 553 aaPredicted RBP9.96□□□□□ -0.82
PDAP1-202ENST00000426447 CTF1Q16619 201 aa9.96□□□□□ -0.82
PDAP1-202ENST00000426447 TMEM128Q5BJH2 165 aa9.96□□□□□ -0.82
PDAP1-202ENST00000426447 LYPD5Q6UWN5 251 aa9.96□□□□□ -0.82
PDAP1-202ENST00000426447 ZNF431Q8TF32 576 aaPredicted RBP9.96□□□□□ -0.82
PDAP1-202ENST00000426447 MSRB1Q9NZV6 116 aa9.96□□□□□ -0.82
PDAP1-202ENST00000426447 RABL2AQ9UBK7 228 aaPredicted RBP9.96□□□□□ -0.82
PDAP1-202ENST00000426447 RABL2BQ9UNT1 228 aa9.96□□□□□ -0.82
PDAP1-202ENST00000426447 NPIPB6E9PJ23 425 aa9.95□□□□□ -0.82
PDAP1-202ENST00000426447 H3BTX0 84 aa9.95□□□□□ -0.82
PDAP1-202ENST00000426447 MRPS12O15235 138 aaKnown RBP9.95□□□□□ -0.82
PDAP1-202ENST00000426447 HOXB5P09067 269 aa9.95□□□□□ -0.82
PDAP1-202ENST00000426447 CT45A10P0DMU9 189 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 125.9 ms