RNA–Protein interactions for RNA: ENST00000424059.1

PMS1-209, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 2,004 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-209ENST00000424059 WDR90Q96KV7 1748 aa2.16□□□□□ -2.06
PMS1-209ENST00000424059 DNMT1P26358 1616 aaKnown RBP2.16□□□□□ -2.06
PMS1-209ENST00000424059 RGPD3A6NKT7 1758 aaPredicted RBP2.16□□□□□ -2.06
PMS1-209ENST00000424059 ROBO1Q9Y6N7 1651 aa2.16□□□□□ -2.06
PMS1-209ENST00000424059 PKD1L3Q7Z443 1732 aa2.15□□□□□ -2.06
PMS1-209ENST00000424059 ZFC3H1O60293 1989 aaKnown RBP2.15□□□□□ -2.06
PMS1-209ENST00000424059 KLLNB2CW77 178 aa2.15□□□□□ -2.06
PMS1-209ENST00000424059 IGLL5B9A064 214 aa2.15□□□□□ -2.06
PMS1-209ENST00000424059 NDUFB2O95178 105 aa2.15□□□□□ -2.06
PMS1-209ENST00000424059 RBMY1CP0DJD4 496 aa2.15□□□□□ -2.06
PMS1-209ENST00000424059 ZNF823P16415 610 aa2.15□□□□□ -2.06
PMS1-209ENST00000424059 SSR2P43308 183 aa2.15□□□□□ -2.06
PMS1-209ENST00000424059 CSN1S1P47710 185 aa2.15□□□□□ -2.06
PMS1-209ENST00000424059 SNRPFP62306 86 aaKnown RBP2.15□□□□□ -2.06
PMS1-209ENST00000424059 SRSF9Q13242 221 aaKnown RBP eCLIP2.15□□□□□ -2.06
PMS1-209ENST00000424059 ABCA11PQ4W5N1 156 aa2.15□□□□□ -2.06
PMS1-209ENST00000424059 WDR38Q5JTN6 314 aa2.15□□□□□ -2.06
PMS1-209ENST00000424059 FAM78AQ5JUQ0 283 aa2.15□□□□□ -2.06
PMS1-209ENST00000424059 LINC01545Q5VT33 79 aa2.15□□□□□ -2.06
PMS1-209ENST00000424059 APCDD1LQ8NCL9 501 aa2.15□□□□□ -2.06
PMS1-209ENST00000424059 FAM57AQ8TBR7 257 aa2.15□□□□□ -2.06
PMS1-209ENST00000424059 KCNS1Q96KK3 526 aa2.15□□□□□ -2.06
PMS1-209ENST00000424059 C4orf45Q96LM5 186 aa2.15□□□□□ -2.06
PMS1-209ENST00000424059 LINC01600Q96MT4 127 aa2.15□□□□□ -2.06
PMS1-209ENST00000424059 OR2A5Q96R48 311 aa2.15□□□□□ -2.06
PMS1-209ENST00000424059 RAI1Q7Z5J4 1906 aaPredicted RBP2.15□□□□□ -2.06
PMS1-209ENST00000424059 TJP1Q07157 1748 aa2.15□□□□□ -2.07
PMS1-209ENST00000424059 KIF26BQ2KJY2 2108 aa2.15□□□□□ -2.07
PMS1-209ENST00000424059 COL14A1Q05707 1796 aaKnown RBP2.15□□□□□ -2.07
PMS1-209ENST00000424059 KIDINS220Q9ULH0 1771 aa2.15□□□□□ -2.07
PMS1-209ENST00000424059 SHPRHQ149N8 1683 aa2.15□□□□□ -2.07
PMS1-209ENST00000424059 A0A087WZ39 114 aa2.15□□□□□ -2.07
PMS1-209ENST00000424059 LOC100131303A0A0U1RQF7 123 aa2.15□□□□□ -2.07
PMS1-209ENST00000424059 A0A1B0GVY2 172 aa2.15□□□□□ -2.07
PMS1-209ENST00000424059 A8MUN3 132 aa2.15□□□□□ -2.07
PMS1-209ENST00000424059 C4orf51C9J302 202 aa2.15□□□□□ -2.07
PMS1-209ENST00000424059 ZNF73O43830 326 aaPredicted RBP2.15□□□□□ -2.07
PMS1-209ENST00000424059 ASAH2BP0C7U1 165 aa2.15□□□□□ -2.07
PMS1-209ENST00000424059 PTHLHP12272 177 aa2.15□□□□□ -2.07
PMS1-209ENST00000424059 IL3RAP26951 378 aa2.15□□□□□ -2.07
PMS1-209ENST00000424059 ZNF80P51504 273 aaPredicted RBP2.15□□□□□ -2.07
PMS1-209ENST00000424059 ZNF136P52737 540 aa2.15□□□□□ -2.07
PMS1-209ENST00000424059 DSCR4P56555 118 aaPredicted RBP2.15□□□□□ -2.07
PMS1-209ENST00000424059 ERVK-16P61578 105 aa2.15□□□□□ -2.07
PMS1-209ENST00000424059 NPC2P61916 151 aa2.15□□□□□ -2.07
PMS1-209ENST00000424059 SNRPD3P62318 126 aaKnown RBP2.15□□□□□ -2.07
PMS1-209ENST00000424059 PRR3P79522 188 aaKnown RBP2.15□□□□□ -2.07
PMS1-209ENST00000424059 SPANXN4Q5MJ08 99 aa2.15□□□□□ -2.07
PMS1-209ENST00000424059 NCBP2-AS2Q69YL0 99 aa2.15□□□□□ -2.07
PMS1-209ENST00000424059 RPL7L1Q6DKI1 246 aaKnown RBP2.15□□□□□ -2.07
PMS1-209ENST00000424059 CLEC19AQ6UXS0 136 aa2.15□□□□□ -2.07
PMS1-209ENST00000424059 Q6ZVQ6 151 aa2.15□□□□□ -2.07
PMS1-209ENST00000424059 BAGE3Q86Y29 109 aa2.15□□□□□ -2.07
PMS1-209ENST00000424059 BAGE2Q86Y30 109 aa2.15□□□□□ -2.07
PMS1-209ENST00000424059 OR5AS1Q8N127 324 aa2.15□□□□□ -2.07
PMS1-209ENST00000424059 Q8N2B8 174 aa2.15□□□□□ -2.07
PMS1-209ENST00000424059 OR8A1Q8NGG7 326 aa2.15□□□□□ -2.07
PMS1-209ENST00000424059 OR5C1Q8NGR4 320 aa2.15□□□□□ -2.07
PMS1-209ENST00000424059 FGF13Q92913 245 aa2.15□□□□□ -2.07
PMS1-209ENST00000424059 C18orf12Q96KH6 178 aa2.15□□□□□ -2.07
PMS1-209ENST00000424059 PGLYRP4Q96LB8 373 aa2.15□□□□□ -2.07
PMS1-209ENST00000424059 CHAC1Q9BUX1 264 aa2.15□□□□□ -2.07
PMS1-209ENST00000424059 NMES1Q9C002 83 aa2.15□□□□□ -2.07
PMS1-209ENST00000424059 CYSTM1Q9H1C7 97 aa2.15□□□□□ -2.07
PMS1-209ENST00000424059 TP73-AS1Q9UF72 201 aa2.15□□□□□ -2.07
PMS1-209ENST00000424059 CSAG2Q9Y5P2 127 aa2.15□□□□□ -2.07
PMS1-209ENST00000424059 ADGRB1O14514 1584 aa2.15□□□□□ -2.07
PMS1-209ENST00000424059 SAMD9LQ8IVG5 1584 aa2.15□□□□□ -2.07
PMS1-209ENST00000424059 UBR1Q8IWV7 1749 aa2.15□□□□□ -2.07
PMS1-209ENST00000424059 PTPRMP28827 1452 aa2.14□□□□□ -2.07
PMS1-209ENST00000424059 MYOM1P52179 1685 aa2.14□□□□□ -2.07
PMS1-209ENST00000424059 ALS2Q96Q42 1657 aa2.14□□□□□ -2.07
PMS1-209ENST00000424059 TRAV9-1A0A075B6T8 112 aa2.14□□□□□ -2.07
PMS1-209ENST00000424059 IGKV1D-43A0A0B4J1Z2 117 aa2.14□□□□□ -2.07
PMS1-209ENST00000424059 IGKV1D-13A0A0B4J2D9 117 aa2.14□□□□□ -2.07
PMS1-209ENST00000424059 TRBV27A0A0K0K1C4 114 aa2.14□□□□□ -2.07
PMS1-209ENST00000424059 hDV102S1A0JD36 115 aa2.14□□□□□ -2.07
PMS1-209ENST00000424059 IRGMA1A4Y4 181 aa2.14□□□□□ -2.07
PMS1-209ENST00000424059 EPOPA6NHQ4 379 aa2.14□□□□□ -2.07
PMS1-209ENST00000424059 C2orf70A6NJV1 201 aa2.14□□□□□ -2.07
PMS1-209ENST00000424059 H0Y9J4 135 aa2.14□□□□□ -2.07
PMS1-209ENST00000424059 LST1O00453 97 aa2.14□□□□□ -2.07
PMS1-209ENST00000424059 FSTL3O95633 263 aa2.14□□□□□ -2.07
PMS1-209ENST00000424059 INAFM2P0DMQ5 153 aa2.14□□□□□ -2.07
PMS1-209ENST00000424059 IGKV1-13P0DP09 117 aa2.14□□□□□ -2.07
PMS1-209ENST00000424059 CD70P32970 193 aa2.14□□□□□ -2.07
PMS1-209ENST00000424059 HIST1H4AP62805 103 aaKnown RBP2.14□□□□□ -2.07
PMS1-209ENST00000424059 MRPS36P82909 103 aaKnown RBP2.14□□□□□ -2.07
PMS1-209ENST00000424059 CYCSP99999 105 aaKnown RBP2.14□□□□□ -2.07
PMS1-209ENST00000424059 DOCK1Q14185 1865 aa2.14□□□□□ -2.07
PMS1-209ENST00000424059 NSUN5P1Q3KNT7 163 aa2.14□□□□□ -2.07
PMS1-209ENST00000424059 ORMDL2Q53FV1 153 aa2.14□□□□□ -2.07
PMS1-209ENST00000424059 Q6ZS49 121 aa2.14□□□□□ -2.07
PMS1-209ENST00000424059 LCA10Q71F78 164 aa2.14□□□□□ -2.07
PMS1-209ENST00000424059 PHF5AQ7RTV0 110 aaKnown RBP2.14□□□□□ -2.07
PMS1-209ENST00000424059 C11orf72Q8NBR9 251 aa2.14□□□□□ -2.07
PMS1-209ENST00000424059 COPS9Q8WXC6 57 aa2.14□□□□□ -2.07
PMS1-209ENST00000424059 RNF185Q96GF1 192 aa2.14□□□□□ -2.07
PMS1-209ENST00000424059 SCN2AQ99250 2005 aa2.14□□□□□ -2.07
PMS1-209ENST00000424059 FAM103A1Q9BTL3 118 aaKnown RBP2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms