RNA–Protein interactions for RNA: ENST00000410731.1

RNU4-55P-201, Transcript of RNA, U4 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU4-55P, Length 137 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-55P-201ENST00000410731 CMSS1Q9BQ75 279 aaKnown RBP-0.74□□□□□ -2.53
RNU4-55P-201ENST00000410731 GGACTQ9BVM4 153 aa-0.74□□□□□ -2.53
RNU4-55P-201ENST00000410731 UCK1Q9HA47 277 aa-0.74□□□□□ -2.53
RNU4-55P-201ENST00000410731 SPTBN2O15020 2390 aa-0.74□□□□□ -2.53
RNU4-55P-201ENST00000410731 CHD6Q8TD26 2715 aa-0.75□□□□□ -2.53
RNU4-55P-201ENST00000410731 OR7C1O76099 320 aaPredicted RBP-0.75□□□□□ -2.53
RNU4-55P-201ENST00000410731 VMO1Q7Z5L0 202 aa-0.75□□□□□ -2.53
RNU4-55P-201ENST00000410731 RMND5BQ96G75 393 aaPredicted RBP-0.75□□□□□ -2.53
RNU4-55P-201ENST00000410731 KIFC1Q9BW19 673 aa-0.75□□□□□ -2.53
RNU4-55P-201ENST00000410731 NKIRAS1Q9NYS0 192 aa-0.75□□□□□ -2.53
RNU4-55P-201ENST00000410731 OPTCQ9UBM4 332 aa-0.75□□□□□ -2.53
RNU4-55P-201ENST00000410731 BCORL1Q5H9F3 1711 aa-0.75□□□□□ -2.53
RNU4-55P-201ENST00000410731 EP300Q09472 2414 aaPredicted RBP-0.76□□□□□ -2.53
RNU4-55P-201ENST00000410731 ODAMA1E959 279 aa-0.76□□□□□ -2.53
RNU4-55P-201ENST00000410731 CLDN24A6NM45 220 aa-0.76□□□□□ -2.53
RNU4-55P-201ENST00000410731 GPR31O00270 319 aa-0.76□□□□□ -2.53
RNU4-55P-201ENST00000410731 IFNA5P01569 189 aa-0.76□□□□□ -2.53
RNU4-55P-201ENST00000410731 IFNA16P05015 189 aa-0.76□□□□□ -2.53
RNU4-55P-201ENST00000410731 KRTAP19-8Q3LI54 63 aa-0.76□□□□□ -2.53
RNU4-55P-201ENST00000410731 LYRM7Q5U5X0 104 aa-0.76□□□□□ -2.53
RNU4-55P-201ENST00000410731 CLDN22Q8N7P3 220 aa-0.76□□□□□ -2.53
RNU4-55P-201ENST00000410731 ATP6V1DQ9Y5K8 247 aa-0.76□□□□□ -2.53
RNU4-55P-201ENST00000410731 MED13LQ71F56 2210 aa-0.76□□□□□ -2.53
RNU4-55P-201ENST00000410731 ZNF292O60281 2723 aa-0.76□□□□□ -2.53
RNU4-55P-201ENST00000410731 MGAMO43451 1857 aa-0.77□□□□□ -2.53
RNU4-55P-201ENST00000410731 M0R233 179 aa-0.77□□□□□ -2.53
RNU4-55P-201ENST00000410731 LY6G6CO95867 125 aa-0.77□□□□□ -2.53
RNU4-55P-201ENST00000410731 RANP62826 216 aaKnown RBP-0.77□□□□□ -2.53
RNU4-55P-201ENST00000410731 MYL5Q02045 173 aa-0.77□□□□□ -2.53
RNU4-55P-201ENST00000410731 RRN3P1Q2M238 152 aa-0.77□□□□□ -2.53
RNU4-55P-201ENST00000410731 RNASE7Q9H1E1 156 aaKnown RBP-0.77□□□□□ -2.53
RNU4-55P-201ENST00000410731 UQCC1Q9NVA1 299 aa-0.77□□□□□ -2.53
RNU4-55P-201ENST00000410731 BOKQ9UMX3 212 aaPredicted RBP-0.77□□□□□ -2.53
RNU4-55P-201ENST00000410731 FLNBO75369 2602 aaKnown RBP-0.77□□□□□ -2.53
RNU4-55P-201ENST00000410731 RBBP6Q7Z6E9 1792 aaKnown RBP-0.78□□□□□ -2.53
RNU4-55P-201ENST00000410731 NCOA1Q15788 1441 aa-0.78□□□□□ -2.53
RNU4-55P-201ENST00000410731 ERBINQ96RT1 1412 aa-0.78□□□□□ -2.53
RNU4-55P-201ENST00000410731 TRAV27A0A087WT01 109 aa-0.78□□□□□ -2.53
RNU4-55P-201ENST00000410731 A0A087WUJ7 227 aa-0.78□□□□□ -2.53
RNU4-55P-201ENST00000410731 IGLV1-51P01701 117 aa-0.78□□□□□ -2.53
RNU4-55P-201ENST00000410731 OR10J4P0C629 311 aa-0.78□□□□□ -2.53
RNU4-55P-201ENST00000410731 OMPP47874 163 aa-0.78□□□□□ -2.53
RNU4-55P-201ENST00000410731 SERPINB9P50453 376 aa-0.78□□□□□ -2.53
RNU4-55P-201ENST00000410731 KRTAP20-2Q3LI61 65 aa-0.78□□□□□ -2.53
RNU4-55P-201ENST00000410731 GLTPQ9NZD2 209 aa-0.78□□□□□ -2.53
RNU4-55P-201ENST00000410731 SPTBN1Q01082 2364 aaKnown RBP-0.78□□□□□ -2.53
RNU4-55P-201ENST00000410731 ABCA1O95477 2261 aa-0.78□□□□□ -2.54
RNU4-55P-201ENST00000410731 HYDINQ4G0P3 5121 aa-0.79□□□□□ -2.54
RNU4-55P-201ENST00000410731 DOPEY1Q5JWR5 2465 aa-0.79□□□□□ -2.54
RNU4-55P-201ENST00000410731 PKHD1P08F94 4074 aa-0.79□□□□□ -2.54
RNU4-55P-201ENST00000410731 M0R036 132 aa-0.79□□□□□ -2.54
RNU4-55P-201ENST00000410731 DEFA3P59666 94 aa-0.79□□□□□ -2.54
RNU4-55P-201ENST00000410731 TMED1Q13445 227 aa-0.79□□□□□ -2.54
RNU4-55P-201ENST00000410731 F5P12259 2224 aa-0.79□□□□□ -2.54
RNU4-55P-201ENST00000410731 FLGP20930 4061 aaPredicted RBP-0.79□□□□□ -2.54
RNU4-55P-201ENST00000410731 RTL1A6NKG5 1358 aa-0.8□□□□□ -2.54
RNU4-55P-201ENST00000410731 KPNA3O00505 521 aaPredicted RBP-0.8□□□□□ -2.54
RNU4-55P-201ENST00000410731 TPM3P06753 285 aa-0.8□□□□□ -2.54
RNU4-55P-201ENST00000410731 RPL37P61927 97 aaKnown RBP-0.8□□□□□ -2.54
RNU4-55P-201ENST00000410731 SPINK13Q1W4C9 94 aa-0.8□□□□□ -2.54
RNU4-55P-201ENST00000410731 ARPINQ7Z6K5 226 aa-0.8□□□□□ -2.54
RNU4-55P-201ENST00000410731 POP5Q969H6 163 aaKnown RBP-0.8□□□□□ -2.54
RNU4-55P-201ENST00000410731 PLEKHB2Q96CS7 222 aa-0.8□□□□□ -2.54
RNU4-55P-201ENST00000410731 LPAR5Q9H1C0 372 aa-0.8□□□□□ -2.54
RNU4-55P-201ENST00000410731 SPTA1P02549 2419 aa-0.8□□□□□ -2.54
RNU4-55P-201ENST00000410731 CSPG4Q6UVK1 2322 aa-0.81□□□□□ -2.54
RNU4-55P-201ENST00000410731 RAB5CP51148 216 aa-0.81□□□□□ -2.54
RNU4-55P-201ENST00000410731 PIGPP57054 158 aa-0.81□□□□□ -2.54
RNU4-55P-201ENST00000410731 BCL2L15Q5TBC7 163 aa-0.81□□□□□ -2.54
RNU4-55P-201ENST00000410731 EIF5AL1Q6IS14 154 aaKnown RBP-0.81□□□□□ -2.54
RNU4-55P-201ENST00000410731 LLPHQ9BRT6 129 aaKnown RBP-0.81□□□□□ -2.54
RNU4-55P-201ENST00000410731 USH2AO75445 5202 aa-0.81□□□□□ -2.54
RNU4-55P-201ENST00000410731 CNOT1A5YKK6 2376 aaKnown RBP-0.81□□□□□ -2.54
RNU4-55P-201ENST00000410731 NEBP20929 6669 aa-0.81□□□□□ -2.54
RNU4-55P-201ENST00000410731 FMN1Q68DA7 1419 aa-0.81□□□□□ -2.54
RNU4-55P-201ENST00000410731 VWFP04275 2813 aa-0.82□□□□□ -2.54
RNU4-55P-201ENST00000410731 PDE6DO43924 150 aa-0.82□□□□□ -2.54
RNU4-55P-201ENST00000410731 IGHV3-33P01772 117 aa-0.82□□□□□ -2.54
RNU4-55P-201ENST00000410731 PRM1P04553 51 aa-0.82□□□□□ -2.54
RNU4-55P-201ENST00000410731 CAV3P56539 151 aa-0.82□□□□□ -2.54
RNU4-55P-201ENST00000410731 VBP1P61758 197 aa-0.82□□□□□ -2.54
RNU4-55P-201ENST00000410731 LINC00299Q6ZSB3 139 aa-0.82□□□□□ -2.54
RNU4-55P-201ENST00000410731 C10orf111Q8N326 155 aa-0.82□□□□□ -2.54
RNU4-55P-201ENST00000410731 OR5D16Q8NGK9 328 aa-0.82□□□□□ -2.54
RNU4-55P-201ENST00000410731 ARL5AQ9Y689 179 aa-0.82□□□□□ -2.54
RNU4-55P-201ENST00000410731 DOCK4Q8N1I0 1966 aa-0.83□□□□□ -2.54
RNU4-55P-201ENST00000410731 SETD2Q9BYW2 2564 aaPredicted RBP-0.83□□□□□ -2.54
RNU4-55P-201ENST00000410731 TGP01266 2768 aa-0.83□□□□□ -2.54
RNU4-55P-201ENST00000410731 ESPL1Q14674 2120 aa-0.83□□□□□ -2.54
RNU4-55P-201ENST00000410731 A6NN06 94 aa-0.83□□□□□ -2.54
RNU4-55P-201ENST00000410731 CFDP00746 253 aaPredicted RBP-0.83□□□□□ -2.54
RNU4-55P-201ENST00000410731 HLA-EP13747 358 aa-0.83□□□□□ -2.54
RNU4-55P-201ENST00000410731 RPL37AP61513 92 aaKnown RBP-0.83□□□□□ -2.54
RNU4-55P-201ENST00000410731 TPM4P67936 248 aa-0.83□□□□□ -2.54
RNU4-55P-201ENST00000410731 COX6A2Q02221 97 aa-0.83□□□□□ -2.54
RNU4-55P-201ENST00000410731 TMEM14EPQ6UXP3 125 aa-0.83□□□□□ -2.54
RNU4-55P-201ENST00000410731 CASC2Q6XLA1 102 aa-0.83□□□□□ -2.54
RNU4-55P-201ENST00000410731 S100A7AQ86SG5 101 aa-0.83□□□□□ -2.54
RNU4-55P-201ENST00000410731 OR51A2Q8NGJ7 313 aa-0.83□□□□□ -2.54
RNU4-55P-201ENST00000410731 TEX37Q96LM6 180 aa-0.83□□□□□ -2.54
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms