RNA–Protein interactions for RNA: ENST00000409766.7

USP39-204, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-204ENST00000409766 ZNF331Q9NQX6 463 aaPredicted RBP15.63■□□□□ 0.09
USP39-204ENST00000409766 K7EQM0 130 aa15.62■□□□□ 0.09
USP39-204ENST00000409766 M0R3E3 92 aa15.62■□□□□ 0.09
USP39-204ENST00000409766 Q71RC1 249 aaPredicted RBP15.62■□□□□ 0.09
USP39-204ENST00000409766 MS4A10Q96PG2 267 aa15.62■□□□□ 0.09
USP39-204ENST00000409766 AAMDCQ9H7C9 122 aa15.62■□□□□ 0.09
USP39-204ENST00000409766 HIF1ANQ9NWT6 349 aa15.62■□□□□ 0.09
USP39-204ENST00000409766 TRAV41A0A0B4J266 112 aa15.61■□□□□ 0.09
USP39-204ENST00000409766 NPIPB6E9PJ23 425 aa15.61■□□□□ 0.09
USP39-204ENST00000409766 Q0VG73 95 aa15.61■□□□□ 0.09
USP39-204ENST00000409766 JOSD1Q15040 202 aaPredicted RBP15.61■□□□□ 0.09
USP39-204ENST00000409766 PSG3Q16557 428 aa15.61■□□□□ 0.09
USP39-204ENST00000409766 EEF1AKMT3Q96AZ1 226 aa15.61■□□□□ 0.09
USP39-204ENST00000409766 ZFP30Q9Y2G7 519 aa15.61■□□□□ 0.09
USP39-204ENST00000409766 FBN2P35556 2912 aa15.61■□□□□ 0.09
USP39-204ENST00000409766 IGHV3OR16-8A0A075B7F1 116 aa15.61■□□□□ 0.09
USP39-204ENST00000409766 TRBV7-1A0A0A6YYK4 115 aa15.61■□□□□ 0.09
USP39-204ENST00000409766 ZNF785A8K8V0 405 aa15.61■□□□□ 0.09
USP39-204ENST00000409766 A8MWL6 223 aa15.61■□□□□ 0.09
USP39-204ENST00000409766 LINC00310P59036 64 aa15.61■□□□□ 0.09
USP39-204ENST00000409766 PSG9Q00887 426 aa15.61■□□□□ 0.09
USP39-204ENST00000409766 CLEC19AQ6UXS0 136 aa15.61■□□□□ 0.09
USP39-204ENST00000409766 DAZAP1Q96EP5 407 aaKnown RBP15.61■□□□□ 0.09
USP39-204ENST00000409766 PSG8Q9UQ74 426 aa15.61■□□□□ 0.09
USP39-204ENST00000409766 SMAD5-AS1Q9Y6J3 95 aa15.61■□□□□ 0.09
USP39-204ENST00000409766 COX6B1P14854 86 aa15.6■□□□□ 0.09
USP39-204ENST00000409766 S100A7P31151 101 aa15.6■□□□□ 0.09
USP39-204ENST00000409766 LRRK2Q5S007 2527 aa15.6■□□□□ 0.09
USP39-204ENST00000409766 AVPP01185 164 aa15.6■□□□□ 0.09
USP39-204ENST00000409766 GZMBP10144 247 aa15.6■□□□□ 0.09
USP39-204ENST00000409766 ESDP10768 282 aa15.6■□□□□ 0.09
USP39-204ENST00000409766 KIAA1644Q3SXP7 199 aa15.6■□□□□ 0.09
USP39-204ENST00000409766 GTSF1Q8WW33 167 aa15.6■□□□□ 0.09
USP39-204ENST00000409766 FAM208BQ5VWN6 2430 aa15.6■□□□□ 0.09
USP39-204ENST00000409766 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.59■□□□□ 0.092e-7■■■■■ 31.3
USP39-204ENST00000409766 A6NDX4 124 aa15.59■□□□□ 0.09
USP39-204ENST00000409766 H3BUX3 64 aa15.59■□□□□ 0.09
USP39-204ENST00000409766 SLC25A16P16260 332 aa15.59■□□□□ 0.09
USP39-204ENST00000409766 GDF5OSQ5U4N7 250 aa15.59■□□□□ 0.09
USP39-204ENST00000409766 TCF24Q7RTU0 167 aa15.59■□□□□ 0.09
USP39-204ENST00000409766 ATP5L2Q7Z4Y8 100 aa15.59■□□□□ 0.09
USP39-204ENST00000409766 ZC2HC1AQ96GY0 325 aa15.59■□□□□ 0.09
USP39-204ENST00000409766 GFRA4Q9GZZ7 299 aa15.59■□□□□ 0.09
USP39-204ENST00000409766 LINC00527Q9UJ94 153 aa15.59■□□□□ 0.09
USP39-204ENST00000409766 PRB4P10163 310 aaPredicted RBP15.58■□□□□ 0.09
USP39-204ENST00000409766 COL8A1P27658 744 aa15.58■□□□□ 0.09
USP39-204ENST00000409766 LY6EQ16553 131 aa15.58■□□□□ 0.09
USP39-204ENST00000409766 C16orf54Q6UWD8 224 aa15.58■□□□□ 0.09
USP39-204ENST00000409766 OR5R1Q8NH85 324 aa15.58■□□□□ 0.09
USP39-204ENST00000409766 PRDM13Q9H4Q3 707 aa15.58■□□□□ 0.09
USP39-204ENST00000409766 GNB4Q9HAV0 340 aa15.58■□□□□ 0.09
USP39-204ENST00000409766 TRAV20A0A0B4J274 112 aa15.58■□□□□ 0.08
USP39-204ENST00000409766 A0A1B0GXF2 115 aa15.58■□□□□ 0.08
USP39-204ENST00000409766 CLPSL1A2RUU4 121 aa15.58■□□□□ 0.08
USP39-204ENST00000409766 F2Z2F3 143 aa15.58■□□□□ 0.08
USP39-204ENST00000409766 SERF1AO75920 110 aa15.58■□□□□ 0.08
USP39-204ENST00000409766 APCSP02743 223 aa15.58■□□□□ 0.08
USP39-204ENST00000409766 IGF1P05019 195 aa15.58■□□□□ 0.08
USP39-204ENST00000409766 GATA3P23771 443 aa15.58■□□□□ 0.08
USP39-204ENST00000409766 ATP5G2Q06055 141 aa15.58■□□□□ 0.08
USP39-204ENST00000409766 SLAQ13239 276 aa15.58■□□□□ 0.08
USP39-204ENST00000409766 ARL6IP6Q8N6S5 226 aa15.58■□□□□ 0.08
USP39-204ENST00000409766 BUB3O43684 328 aa15.57■□□□□ 0.08
USP39-204ENST00000409766 ZNF253O75346 499 aa15.57■□□□□ 0.08
USP39-204ENST00000409766 C9orf152Q5JTZ5 239 aa15.57■□□□□ 0.08
USP39-204ENST00000409766 BAGE3Q86Y29 109 aa15.57■□□□□ 0.08
USP39-204ENST00000409766 OR4B1Q8NGF8 309 aa15.57■□□□□ 0.08
USP39-204ENST00000409766 NOL4LQ96MY1 436 aaPredicted RBP15.57■□□□□ 0.08
USP39-204ENST00000409766 ATP6V0BQ99437 205 aa15.57■□□□□ 0.08
USP39-204ENST00000409766 ANKRD17O75179 2603 aaKnown RBP15.57■□□□□ 0.08
USP39-204ENST00000409766 SERTM2A0A1B0GWG4 89 aa15.56■□□□□ 0.08
USP39-204ENST00000409766 FAM231BA6NCW3 169 aa15.56■□□□□ 0.08
USP39-204ENST00000409766 FAM223BA6NKX1 122 aa15.56■□□□□ 0.08
USP39-204ENST00000409766 CSN1S1P47710 185 aa15.56■□□□□ 0.08
USP39-204ENST00000409766 OR10J3Q5JRS4 329 aa15.56■□□□□ 0.08
USP39-204ENST00000409766 FAM223AQ8IWN6 122 aa15.56■□□□□ 0.08
USP39-204ENST00000409766 ASCL2Q99929 193 aa15.56■□□□□ 0.08
USP39-204ENST00000409766 A0A096LNT2 108 aa15.56■□□□□ 0.08
USP39-204ENST00000409766 A1L4Q6 167 aa15.56■□□□□ 0.08
USP39-204ENST00000409766 LINC00587B1AMM8 73 aa15.56■□□□□ 0.08
USP39-204ENST00000409766 IGHG2P01859 326 aa15.56■□□□□ 0.08
USP39-204ENST00000409766 RAB9AP51151 201 aa15.56■□□□□ 0.08
USP39-204ENST00000409766 SRIP30626 198 aa15.55■□□□□ 0.08
USP39-204ENST00000409766 IGHG4P01861 327 aa15.55■□□□□ 0.08
USP39-204ENST00000409766 RBPMS2Q6ZRY4 209 aaKnown RBP15.55■□□□□ 0.08
USP39-204ENST00000409766 OR2D3Q8NGH3 330 aa15.55■□□□□ 0.08
USP39-204ENST00000409766 M0QZK8 103 aa15.54■□□□□ 0.08
USP39-204ENST00000409766 TRGV3P03979 118 aa15.54■□□□□ 0.08
USP39-204ENST00000409766 CAMPP49913 170 aa15.54■□□□□ 0.08
USP39-204ENST00000409766 CRIP1P50238 77 aa15.54■□□□□ 0.08
USP39-204ENST00000409766 PAFAH1B2P68402 229 aa15.54■□□□□ 0.08
USP39-204ENST00000409766 RELQ04864 619 aaPredicted RBP15.54■□□□□ 0.08
USP39-204ENST00000409766 LINC01356Q8N9X3 169 aa15.54■□□□□ 0.08
USP39-204ENST00000409766 PGLYRP4Q96LB8 373 aa15.54■□□□□ 0.08
USP39-204ENST00000409766 CENPEQ02224 2701 aa15.54■□□□□ 0.08
USP39-204ENST00000409766 KMT2BQ9UMN6 2715 aaPredicted RBP15.53■□□□□ 0.08
USP39-204ENST00000409766 A0A087X0K7 114 aa15.53■□□□□ 0.08
USP39-204ENST00000409766 PPIFP30405 207 aaKnown RBP15.53■□□□□ 0.08
USP39-204ENST00000409766 HBBP68871 147 aa15.53■□□□□ 0.08
USP39-204ENST00000409766 CHEK1O14757 476 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms