RNA–Protein interactions for RNA: ENST00000405807.8

COL4A3BP-204, Transcript of collagen type IV alpha 3 binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A3BP, Length 2,843 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-204ENST00000405807 GCSHP23434 173 aa12.96□□□□□ -0.33
COL4A3BP-204ENST00000405807 ZNF474Q6S9Z5 364 aaPredicted RBP12.96□□□□□ -0.33
COL4A3BP-204ENST00000405807 SAA1P0DJI8 122 aaPredicted RBP12.96□□□□□ -0.34
COL4A3BP-204ENST00000405807 FAM19A5Q7Z5A7 132 aaPredicted RBP12.96□□□□□ -0.34
COL4A3BP-204ENST00000405807 RBMXL3Q8N7X1 1067 aaKnown RBP12.96□□□□□ -0.34
COL4A3BP-204ENST00000405807 SMAD7O15105 426 aaKnown RBP12.95□□□□□ -0.34
COL4A3BP-204ENST00000405807 FXYD2P54710 66 aa12.95□□□□□ -0.34
COL4A3BP-204ENST00000405807 TCTAP57738 103 aa12.95□□□□□ -0.34
COL4A3BP-204ENST00000405807 HBBP68871 147 aa12.95□□□□□ -0.34
COL4A3BP-204ENST00000405807 LINC01545Q5VT33 79 aa12.95□□□□□ -0.34
COL4A3BP-204ENST00000405807 CHCHD1Q96BP2 118 aaKnown RBP12.95□□□□□ -0.34
COL4A3BP-204ENST00000405807 ATP6V0E2Q8NHE4 81 aa12.95□□□□□ -0.34
COL4A3BP-204ENST00000405807 C7orf69Q9H7B7 122 aa12.95□□□□□ -0.34
COL4A3BP-204ENST00000405807 NDUFA4L2Q9NRX3 87 aa12.95□□□□□ -0.34
COL4A3BP-204ENST00000405807 SIGLEC9Q9Y336 463 aa12.95□□□□□ -0.34
COL4A3BP-204ENST00000405807 PHLDA1Q8WV24 401 aaPredicted RBP12.94□□□□□ -0.34
COL4A3BP-204ENST00000405807 AJUBAQ96IF1 538 aa12.94□□□□□ -0.34
COL4A3BP-204ENST00000405807 RBP4P02753 201 aa12.94□□□□□ -0.34
COL4A3BP-204ENST00000405807 MRPL23Q16540 153 aaKnown RBP12.94□□□□□ -0.34
COL4A3BP-204ENST00000405807 TMEM30BQ3MIR4 351 aa12.94□□□□□ -0.34
COL4A3BP-204ENST00000405807 SPRNQ5BIV9 151 aa12.94□□□□□ -0.34
COL4A3BP-204ENST00000405807 SLC25A48Q6ZT89 311 aaKnown RBP12.94□□□□□ -0.34
COL4A3BP-204ENST00000405807 FXYD5Q96DB9 178 aa12.94□□□□□ -0.34
COL4A3BP-204ENST00000405807 EPDR1Q9UM22 224 aa12.94□□□□□ -0.34
COL4A3BP-204ENST00000405807 IGHG3P01860 377 aa12.94□□□□□ -0.34
COL4A3BP-204ENST00000405807 CSN1S1P47710 185 aa12.94□□□□□ -0.34
COL4A3BP-204ENST00000405807 PATE2Q6UY27 113 aa12.94□□□□□ -0.34
COL4A3BP-204ENST00000405807 C9orf106Q8NAJ2 232 aa12.94□□□□□ -0.34
COL4A3BP-204ENST00000405807 A8MWL6 223 aa12.93□□□□□ -0.34
COL4A3BP-204ENST00000405807 MOSP00540 346 aa12.93□□□□□ -0.34
COL4A3BP-204ENST00000405807 RPP21Q9H633 154 aaKnown RBP12.93□□□□□ -0.34
COL4A3BP-204ENST00000405807 F11RQ9Y624 299 aaKnown RBP12.93□□□□□ -0.34
COL4A3BP-204ENST00000405807 TCRBV4S1A1TA0A5B7 111 aa12.93□□□□□ -0.34
COL4A3BP-204ENST00000405807 INS-IGF2F8WCM5 200 aa12.93□□□□□ -0.34
COL4A3BP-204ENST00000405807 SPRY3O43610 288 aa12.93□□□□□ -0.34
COL4A3BP-204ENST00000405807 MYCNOSP40205 109 aa12.93□□□□□ -0.34
COL4A3BP-204ENST00000405807 MSMPQ1L6U9 139 aa12.93□□□□□ -0.34
COL4A3BP-204ENST00000405807 FAM201AQ5SY85 155 aa12.93□□□□□ -0.34
COL4A3BP-204ENST00000405807 PDPNQ86YL7 162 aa12.93□□□□□ -0.34
COL4A3BP-204ENST00000405807 BCL6BQ8N143 479 aaPredicted RBP12.93□□□□□ -0.34
COL4A3BP-204ENST00000405807 ITLN1Q8WWA0 313 aa12.93□□□□□ -0.34
COL4A3BP-204ENST00000405807 NPIPB3Q92617 1050 aa12.93□□□□□ -0.34
COL4A3BP-204ENST00000405807 LINC00574Q9H8X3 128 aa12.93□□□□□ -0.34
COL4A3BP-204ENST00000405807 TNCP24821 2201 aa12.92□□□□□ -0.34
COL4A3BP-204ENST00000405807 PRR14LQ5THK1 2151 aa12.92□□□□□ -0.34
COL4A3BP-204ENST00000405807 IGLL5B9A064 214 aa12.92□□□□□ -0.34
COL4A3BP-204ENST00000405807 CSN3P07498 182 aa12.92□□□□□ -0.34
COL4A3BP-204ENST00000405807 ZNF883P0CG24 379 aa12.92□□□□□ -0.34
COL4A3BP-204ENST00000405807 GNG5P63218 68 aa12.92□□□□□ -0.34
COL4A3BP-204ENST00000405807 LPAL2Q16609 132 aa12.92□□□□□ -0.34
COL4A3BP-204ENST00000405807 FAM169BQ8N8A8 192 aa12.92□□□□□ -0.34
COL4A3BP-204ENST00000405807 RPUSD1Q9UJJ7 312 aaKnown RBP12.92□□□□□ -0.34
COL4A3BP-204ENST00000405807 KLF12Q9Y4X4 402 aa12.92□□□□□ -0.34
COL4A3BP-204ENST00000405807 TIMM8BQ9Y5J9 83 aaPredicted RBP12.92□□□□□ -0.34
COL4A3BP-204ENST00000405807 TM4SF5O14894 197 aa12.92□□□□□ -0.34
COL4A3BP-204ENST00000405807 NHP2Q9NX24 153 aaKnown RBP12.92□□□□□ -0.34
COL4A3BP-204ENST00000405807 OR5AL1P0C617 328 aa12.91□□□□□ -0.34
COL4A3BP-204ENST00000405807 TNFRSF1AP19438 455 aa12.91□□□□□ -0.34
COL4A3BP-204ENST00000405807 SUB1P53999 127 aaKnown RBP eCLIP12.91□□□□□ -0.34
COL4A3BP-204ENST00000405807 FOXA3P55318 350 aaPredicted RBP12.91□□□□□ -0.34
COL4A3BP-204ENST00000405807 CT83Q5H943 113 aa12.91□□□□□ -0.34
COL4A3BP-204ENST00000405807 RND1Q92730 232 aa12.91□□□□□ -0.34
COL4A3BP-204ENST00000405807 ZNF71Q9NQZ8 489 aaPredicted RBP12.91□□□□□ -0.34
COL4A3BP-204ENST00000405807 DYSFO75923 2080 aa12.91□□□□□ -0.34
COL4A3BP-204ENST00000405807 EVI2AP22794 236 aa12.91□□□□□ -0.34
COL4A3BP-204ENST00000405807 ATP1A1-AS1Q5TC04 95 aa12.91□□□□□ -0.34
COL4A3BP-204ENST00000405807 DUX4L9Q6RFH8 374 aaPredicted RBP12.91□□□□□ -0.34
COL4A3BP-204ENST00000405807 LINC00305Q7Z4B0 112 aa12.91□□□□□ -0.34
COL4A3BP-204ENST00000405807 RNF7Q9UBF6 113 aa12.91□□□□□ -0.34
COL4A3BP-204ENST00000405807 PGPA6NDG6 321 aa12.9□□□□□ -0.34
COL4A3BP-204ENST00000405807 FSTL3O95633 263 aa12.9□□□□□ -0.34
COL4A3BP-204ENST00000405807 PIP4P1Q86T03 277 aa12.9□□□□□ -0.34
COL4A3BP-204ENST00000405807 MLST8Q9BVC4 326 aa12.9□□□□□ -0.34
COL4A3BP-204ENST00000405807 PRSS22Q9GZN4 317 aa12.9□□□□□ -0.34
COL4A3BP-204ENST00000405807 P01737 135 aa12.9□□□□□ -0.34
COL4A3BP-204ENST00000405807 SLC25A15Q9Y619 301 aa12.9□□□□□ -0.34
COL4A3BP-204ENST00000405807 DCHS1Q96JQ0 3298 aa12.9□□□□□ -0.35
COL4A3BP-204ENST00000405807 ASCL5Q7RTU5 278 aa12.89□□□□□ -0.35
COL4A3BP-204ENST00000405807 THAP8Q8NA92 274 aa12.89□□□□□ -0.35
COL4A3BP-204ENST00000405807 PROCRQ9UNN8 238 aa12.89□□□□□ -0.35
COL4A3BP-204ENST00000405807 IGKV1D-37A0A075B6S9 117 aa12.89□□□□□ -0.35
COL4A3BP-204ENST00000405807 ZNF833PQ6ZTB9 187 aa12.89□□□□□ -0.35
COL4A3BP-204ENST00000405807 DEFB108BQ8NET1 73 aa12.89□□□□□ -0.35
COL4A3BP-204ENST00000405807 PGLYRP4Q96LB8 373 aa12.89□□□□□ -0.35
COL4A3BP-204ENST00000405807 SGK494Q96LW2 274 aa12.89□□□□□ -0.35
COL4A3BP-204ENST00000405807 GAFA1Q96PS6 74 aa12.89□□□□□ -0.35
COL4A3BP-204ENST00000405807 GFRA4Q9GZZ7 299 aa12.89□□□□□ -0.35
COL4A3BP-204ENST00000405807 ZNF492Q9P255 531 aa12.89□□□□□ -0.35
COL4A3BP-204ENST00000405807 DKK4Q9UBT3 224 aa12.89□□□□□ -0.35
COL4A3BP-204ENST00000405807 HEATR1Q9H583 2144 aaKnown RBP12.89□□□□□ -0.35
COL4A3BP-204ENST00000405807 RBPMS2Q6ZRY4 209 aaKnown RBP12.89□□□□□ -0.35
COL4A3BP-204ENST00000405807 RASL10AQ92737 203 aa12.89□□□□□ -0.35
COL4A3BP-204ENST00000405807 CCL13Q99616 98 aa12.89□□□□□ -0.35
COL4A3BP-204ENST00000405807 ZNRD1Q9P1U0 126 aa12.89□□□□□ -0.35
COL4A3BP-204ENST00000405807 FLYWCH2Q96CP2 140 aaKnown RBP12.88□□□□□ -0.35
COL4A3BP-204ENST00000405807 FMC1Q96HJ9 113 aa12.88□□□□□ -0.35
COL4A3BP-204ENST00000405807 MRPL20Q9BYC9 149 aaKnown RBP12.88□□□□□ -0.35
COL4A3BP-204ENST00000405807 CFAP47Q6ZTR5 3102 aa12.88□□□□□ -0.35
COL4A3BP-204ENST00000405807 TRAV4A0A0B4J268 109 aa12.88□□□□□ -0.35
COL4A3BP-204ENST00000405807 E7EUB6 86 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms